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Carg00881 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00881
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionHTH-type transcriptional regulator protein ptxE
Genome locationCarg_Chr03:7232694..7233146
RNA-Seq ExpressionCarg00881
SyntenyCarg00881
Gene Ontology termsNA
InterPro domainsIPR025322 - Protein of unknown function DUF4228, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604220.1 CASP-like protein 5C1, partial [Cucurbita argyrosperma subsp. sororia]2.5e-74100Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

XP_004141948.1 uncharacterized protein LOC101203564 [Cucumis sativus]1.9e-6183.77Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSEST+VATA+LILHDGSLQEFSYP+KVSYVLQKNPSCFICNSD+MDFDDAL AI DDEELQLGQLYFALPL+RLKQPLQ +EMAALAVKA++AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE
        MK   GDK G+RRRSVSPVVFT +ELK+RKRV AGR    GRKKFAANL AIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE

XP_022949699.1 uncharacterized protein LOC111453016 [Cucurbita moschata]2.5e-74100Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

XP_022977873.1 uncharacterized protein LOC111478034 [Cucurbita maxima]1.8e-6793.33Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSES SVATARLIL+DGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDAL AIGDDEELQLG LYFALPLSRLKQPLQ QEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRG G+KYGNRRRSVSPVVF AKELKSRK VVA RGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

XP_023544964.1 uncharacterized protein LOC111804401 [Cucurbita pepo subsp. pepo]1.1e-7298.67Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQ QEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRGAGDKYGNRRRSVSPVVF AKELKSRKRVVAGRGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

TrEMBL top hitse value%identityAlignment
A0A0A0KJB4 Uncharacterized protein9.1e-6283.77Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSEST+VATA+LILHDGSLQEFSYP+KVSYVLQKNPSCFICNSD+MDFDDAL AI DDEELQLGQLYFALPL+RLKQPLQ +EMAALAVKA++AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE
        MK   GDK G+RRRSVSPVVFT +ELK+RKRV AGR    GRKKFAANL AIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE

A0A5D3CRH4 HTH-type transcriptional regulator protein ptxE1.3e-6081.82Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSES +VATA+LILHDGSLQEFSYP+KVSYVLQKNPSCFICNSD+MDFDDAL AI DDEELQ+GQLYFALPL+RL+QPLQ +EMAALAVKA++AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE
        MK   GDK G+RRRSVSPVVFT +ELK+RKRV AGR    GRKKFAANL AIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE

A0A6J1GDL4 uncharacterized protein LOC1114530161.2e-74100Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

A0A6J1HH54 uncharacterized protein LOC1114634381.3e-6082.47Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSEST+VATA+LIL+DGSLQEFSYP+KVSYVLQKNPSCFICNSD+MDFDDAL AI D+EELQLGQLYFALPLSRLKQPLQ +EMAALAVKA++AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE
        MK GAGDK  +RRRSVSP+VFT +ELK+RKR+ AGR    GRKKFAANL+AIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGR----GRKKFAANLTAIPE

A0A6J1IRD3 uncharacterized protein LOC1114780348.5e-6893.33Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSES SVATARLIL+DGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDAL AIGDDEELQLG LYFALPLSRLKQPLQ QEMAALAVKASAAL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE
        MKRG G+KYGNRRRSVSPVVF AKELKSRK VVA RGRKKFAANLTAIPE
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G76600.1 unknown protein1.2e-1641.18Show/hide
Query:  MGICSSSES----TSVATARLILHDGSLQEFSYPIKVSYVLQ----------KNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQP
        MG+C S       +S  TA+++  +G L+E+  P+  S VL+           + S F+CNSD + +DD + AI  DE LQ  Q+YF LP+S+ +  L  
Subjt:  MGICSSSES----TSVATARLILHDGSLQEFSYPIKVSYVLQ----------KNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQP

Query:  QEMAALAVKASAALMKRGAGDKYGNRRRS--VSPVV
         +MAALAVKAS A+ K  A  K   RRRS  +SPVV
Subjt:  QEMAALAVKASAALMKRGAGDKYGNRRRS--VSPVV

AT2G23690.1 unknown protein8.5e-4458.9Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSS EST VATA+LILHDG + EF+ P+KV YVLQKNP CFICNSDDMDFD+ + AI  DEE QLGQLYFALPLS L   L+ +EMAALAVKAS+AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAG---DKYGNRRRSVSPVVFTAKEL----------KSRKRVVAGRGRKKFAANLTAIPE
        M+ G     DK   RR+ VSPV+F+A+ +            ++R   G GR+K+AA L+ I E
Subjt:  MKRGAG---DKYGNRRRSVSPVVFTAKEL----------KSRKRVVAGRGRKKFAANLTAIPE

AT3G50800.1 unknown protein1.1e-3252.63Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MG C+S ES    TA+LIL DG+LQEFS P+KV  +LQKNP+ F+CNSDDMDFDDA+LA+   E+L+ G+LYF LPL+ L  PL+  EMAALAVKAS+AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKE--LKSRKRVVAGRGRKKFAANLTAIPE
         K G G    N        V   K      R     G+GR+KF A L++I E
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKE--LKSRKRVVAGRGRKKFAANLTAIPE

AT4G37240.1 unknown protein9.7e-4062.24Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MGICSSSEST VATA+LIL DG + EF+ P+KV YVL K P CFICNSDDMDFDDA+ AI  DEELQLGQ+YFALPL  L+QPL+ +EMAALAVKAS+AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKRGAGDKYGNRRRSVSPVVFTAKELK---SRKRVVAGRGRKK
        M+ G G   G RR+ V P+V     ++       V +G GR+K
Subjt:  MKRGAGDKYGNRRRSVSPVVFTAKELK---SRKRVVAGRGRKK

AT5G66580.1 unknown protein4.4e-3250Show/hide
Query:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL
        MG C+S ES    +A+LIL DG+LQEFS P+KV  +LQKNP+ F+CNSD+MDFDDA+ A+  +EEL+ GQLYF LPL+ L  PL+ +EMAALAVKAS+AL
Subjt:  MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAAL

Query:  MKR-GAGDKYGNRRRSVSPVVFTAKELKSRKR-----VVAGRGRKKFAANLTAIPE
         K  G G   G+   + S   +  K +   K         G+G+++F ANL+ I E
Subjt:  MKR-GAGDKYGNRRRSVSPVVFTAKELKSRKR-----VVAGRGRKKFAANLTAIPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTATTTGCAGTTCATCGGAATCTACTTCAGTGGCCACCGCCAGACTGATCCTTCACGACGGAAGCCTGCAGGAATTTTCTTATCCAATCAAGGTTTCGTACGTTCT
TCAGAAGAATCCGTCGTGCTTTATATGCAACTCCGACGATATGGATTTCGATGACGCCTTGTTAGCCATTGGCGACGACGAAGAGCTTCAACTCGGACAGCTCTATTTTG
CACTGCCATTGAGTAGGCTGAAGCAGCCGCTTCAGCCCCAGGAAATGGCCGCATTGGCCGTCAAGGCCAGCGCTGCACTCATGAAACGTGGCGCAGGAGACAAATATGGC
AACCGCCGGAGATCAGTGTCTCCGGTGGTTTTCACGGCTAAGGAACTCAAGAGTCGCAAACGAGTAGTCGCCGGCCGTGGAAGAAAAAAATTCGCGGCGAATTTGACGGC
GATTCCTGAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTATTTGCAGTTCATCGGAATCTACTTCAGTGGCCACCGCCAGACTGATCCTTCACGACGGAAGCCTGCAGGAATTTTCTTATCCAATCAAGGTTTCGTACGTTCT
TCAGAAGAATCCGTCGTGCTTTATATGCAACTCCGACGATATGGATTTCGATGACGCCTTGTTAGCCATTGGCGACGACGAAGAGCTTCAACTCGGACAGCTCTATTTTG
CACTGCCATTGAGTAGGCTGAAGCAGCCGCTTCAGCCCCAGGAAATGGCCGCATTGGCCGTCAAGGCCAGCGCTGCACTCATGAAACGTGGCGCAGGAGACAAATATGGC
AACCGCCGGAGATCAGTGTCTCCGGTGGTTTTCACGGCTAAGGAACTCAAGAGTCGCAAACGAGTAGTCGCCGGCCGTGGAAGAAAAAAATTCGCGGCGAATTTGACGGC
GATTCCTGAGTAG
Protein sequenceShow/hide protein sequence
MGICSSSESTSVATARLILHDGSLQEFSYPIKVSYVLQKNPSCFICNSDDMDFDDALLAIGDDEELQLGQLYFALPLSRLKQPLQPQEMAALAVKASAALMKRGAGDKYG
NRRRSVSPVVFTAKELKSRKRVVAGRGRKKFAANLTAIPE