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Carg00897 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00897
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages;
Genome locationCarg_Chr03:7309846..7313472
RNA-Seq ExpressionCarg00897
SyntenyCarg00897
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7034395.1 hypothetical protein SDJN02_04122, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-50100Show/hide
Query:  MKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        MKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
Subjt:  MKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

XP_004141960.1 uncharacterized protein LOC101206523 [Cucumis sativus]5.0e-4793.75Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

XP_022950290.1 uncharacterized protein LOC111453422 [Cucurbita moschata]5.3e-4998.96Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRD+SRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

XP_022977957.1 uncharacterized protein LOC111478092 [Cucurbita maxima]2.0e-4897.92Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTT+SFPTDNHHPYHQSHHSPPTRKSILSCFNCC+KA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

XP_023545041.1 uncharacterized protein LOC111804467 [Cucurbita pepo subsp. pepo]2.4e-49100Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

TrEMBL top hitse value%identityAlignment
A0A0A0KJ83 Uncharacterized protein2.4e-4793.75Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT++FPTDNHHPYHQ+HHSPPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

A0A1S3B006 uncharacterized protein LOC103484698 isoform X14.5e-4693.81Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT+SFPTDNHHPY HQSHH PPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCVKA

A0A1S3B0G0 uncharacterized protein LOC103484698 isoform X24.5e-4693.81Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQ+PDYSLDFSK+RENRKQNKRDVSRASLGNEEELIA AAPPTTT+SFPTDNHHPY HQSHH PPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPY-HQSHHSPPTRKSILSCFNCCVKA

A0A6J1GFA9 uncharacterized protein LOC1114534222.6e-4998.96Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRD+SRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

A0A6J1IJV1 uncharacterized protein LOC1114780929.8e-4997.92Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA
        KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTT+SFPTDNHHPYHQSHHSPPTRKSILSCFNCC+KA
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G09960.1 FUNCTIONS IN: molecular_function unknown2.2e-2963.81Show/hide
Query:  KTAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPT---DNHHPYHQSH----HSPPTRKSILSCFN
        K  PWLSVPQFGDWDQK  G MPDYS+DF+KIRE RKQNKRD SRASLGNEEELI      T+T    T   +N   +  SH    HSP TR+S+ SCFN
Subjt:  KTAPWLSVPQFGDWDQK--GQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPT---DNHHPYHQSH----HSPPTRKSILSCFN

Query:  CCVKA
        CCVKA
Subjt:  CCVKA

AT5G19473.1 RPM1-interacting protein 4 (RIN4) family protein3.8e-1341.18Show/hide
Query:  KTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPP-----TRKSILSCFNCC
        + A W  VPQFG WDQKG     +YS+ FSK R NRKQNK  V  +SLG+E+EL+ S             NH   H  H +        +K IL+  NCC
Subjt:  KTAPWLSVPQFGDWDQKG--QMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPP-----TRKSILSCFNCC

Query:  VK
        ++
Subjt:  VK

AT5G64850.1 FUNCTIONS IN: molecular_function unknown3.6e-2759.81Show/hide
Query:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI--------ASAAPPTTTNSFPTDNHHPYHQSH---HSPPTRKSILSC
        K +PWLSVPQFGDWDQKG   DYS+DFSKIRE RK NKRD SRASLGNEEELI           A P    +  +DN++    SH   HSP  R+ I SC
Subjt:  KTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELI--------ASAAPPTTTNSFPTDNHHPYHQSH---HSPPTRKSILSC

Query:  FNCCVKA
        FNCCVKA
Subjt:  FNCCVKA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACA
GAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGAACTCTTTCCCAACTGATAACCATCACCCCT
ATCATCAGAGTCATCATTCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAAACTGCTCCATGGCTTTCAGTGCCACAGTTTGGAGATTGGGACCAGAAGGGACAGATGCCTGACTACTCTCTTGATTTCTCAAAAATTAGGGAAAATAGGAAACA
GAACAAGAGAGACGTGTCTCGAGCGAGTCTTGGAAATGAAGAGGAGCTCATTGCCTCAGCTGCGCCTCCAACCACAACGAACTCTTTCCCAACTGATAACCATCACCCCT
ATCATCAGAGTCATCATTCTCCACCAACAAGAAAGAGCATTCTAAGCTGCTTCAACTGCTGCGTGAAAGCCTGAATTGAGTAGTCTTGAAGAGCCCACTTGTAAGTTGAA
ATGTCATTGTATTTATTATTGCTTTGGTTCGATTACCTTCACTGCCCTTTATTTGAATTAGAACAAATGTATTATATGTTTGGATTTTGTAACATGGCTTTGTTCTGGAC
TGTGGCTGCTACTGTCTCATTAATTCCTCCTTGAATTAA
Protein sequenceShow/hide protein sequence
MKTAPWLSVPQFGDWDQKGQMPDYSLDFSKIRENRKQNKRDVSRASLGNEEELIASAAPPTTTNSFPTDNHHPYHQSHHSPPTRKSILSCFNCCVKA