; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00955 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00955
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionsplicing factor 3A subunit 2
Genome locationCarg_Chr06:1919754..1922545
RNA-Seq ExpressionCarg00955
SyntenyCarg00955
Gene Ontology termsGO:0000245 - spliceosomal complex assembly (biological process)
GO:0005686 - U2 snRNP (cellular component)
GO:0071004 - U2-type prespliceosome (cellular component)
GO:0071013 - catalytic step 2 spliceosome (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR000690 - Matrin/U1-C, C2H2-type zinc finger
IPR003604 - Matrin/U1-C-like, C2H2-type zinc finger
IPR031781 - SF3A2 domain
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137848.1 splicing factor 3A subunit 2 [Cucumis sativus]1.8e-17395.6Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

XP_008442733.1 PREDICTED: splicing factor 3A subunit 2 [Cucumis melo]3.1e-17395.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

XP_022936955.1 splicing factor 3A subunit 2 [Cucurbita moschata]5.9e-180100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
        SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF

Query:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

XP_023005145.1 splicing factor 3A subunit 2 [Cucurbita maxima]2.9e-17999.7Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
        SKMFTLQLYFKSKP EANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF

Query:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

XP_023540957.1 splicing factor 3A subunit 2 [Cucurbita pepo subsp. pepo]1.7e-17999.7Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
        SKMFTLQLYFKSKPLEANKPQTVPAANGT PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF

Query:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

TrEMBL top hitse value%identityAlignment
A0A0A0LEB1 Matrin-type domain-containing protein8.8e-17495.6Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAA+AQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPP+G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQGFPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

A0A1S3B729 splicing factor 3A subunit 21.5e-17395.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

A0A5D3DPC7 Splicing factor 3A subunit 21.5e-17395.89Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG
        SKMFTLQLYFKSKP EANKP  VPAANGTV       PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPP VMANGPPRPMPPGGAPPIPPPPPVG
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTV-------PLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVG

Query:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        NNTMANFTPGTQMNR PMPPPPQ FPGQG+RQPPPPPPNMG
Subjt:  NNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1FF65 splicing factor 3A subunit 22.8e-180100Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
        SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF

Query:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

A0A6J1KWM2 splicing factor 3A subunit 21.4e-17999.7Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
        KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
        SKMFTLQLYFKSKP EANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANF

Query:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
        TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG
Subjt:  TPGTQMNRLPMPPPPQGFPGQGVRQPPPPPPNMG

SwissProt top hitse value%identityAlignment
A5PJN8 Splicing factor 3A subunit 22.3e-7856.32Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFK-SKP-----LEANKP----QTVPAANGTVPLPPPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMPPG
        LQ +FK  KP     L A  P       P  NG  P PP P++ PPPPP     PP   + P    PP P  LPPP     PP     PP     P  PG
Subjt:  LQLYFK-SKP-----LEANKP----QTVPAANGTVPLPPPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMPPG

Query:  GAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP---PPPNMG
          PP P   PP PV +   +   P       P P   PP  G   P  GV  P P   PPP+ G
Subjt:  GAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP---PPPNMG

Q15428 Splicing factor 3A subunit 21.0e-7856.32Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ DSE  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFK-SKP-----LEANKP----QTVPAANGTVPLPPPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMPPG
        LQ +FK  KP     L A  P       P  NG  P PP P++ PPPPP     PP     P    PP P  LPPP     PP     PP     P  PG
Subjt:  LQLYFK-SKP-----LEANKP----QTVPAANGTVPLPPPPQAPPPPPP-----PPQQGAPPRVPPPPMPGSLPPP-----PPVMANGPP----RPMPPG

Query:  GAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP---PPPNMG
          PP P   PP P  +   +   P       P P   PP  G   P  GV  P P   PPP+ G
Subjt:  GAPPIP---PPPPVGNNTMANFTPGTQMNRLPMP---PPPQGF--PGQGVRQPPP---PPPNMG

Q54B65 Splicing factor 3A subunit 27.7e-6661.21Show/hide
Query:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR
        E+G K GSGG  S+Q + IDRRER ++L LE +D++KDPY + NH+GS+EC+LCLT+HNN GNYLAHTQGK+HQT+LA+RAA+E +E P+  + +     
Subjt:  EWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPH---KR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW
        +V  +KT+KIGRPGY++ KQ DS+T Q SLLFQI+YPEIE   +PRHR MS++EQRV+  +K YQYLLFAAEPYE IAFK+P+ EID++T    KFF+HW
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKST---PKFFSHW

Query:  DPDSKMFTLQLYFK
        D  +K FTLQLYFK
Subjt:  DPDSKMFTLQLYFK

Q62203 Splicing factor 3A subunit 24.2e-7257.65Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P + KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF          F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPV--MANGPPRP--MPPGGAPPIPPPPPVGNNTMANFT
        LQ +FK +   A  P ++PA    V  PPPP     PP PP   A P  PPPP    LPP PP     +GPP P  MPP  AP + PP PV +   +   
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPV--MANGPPRP--MPPGGAPPIPPPPPVGNNTMANFT

Query:  PGTQMNRLPMP---PPPQGF--PGQGVRQPPP--PPPNMG
        P       P P   PP  G   P  GV  P P   PP  G
Subjt:  PGTQMNRLPMP---PPPQGF--PGQGVRQPPP--PPPNMG

Q6AXT8 Splicing factor 3A subunit 22.5e-8059.16Show/hide
Query:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR
        G K GSGG AS+     DRRERLR+LALETID+ KDPYFM+NHLGSYECKLCLTLHNNEG+YLAHTQGK+HQTNLA+RAA+EAKEAPAQP P K KV V+
Subjt:  GSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVR

Query:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT
        K VKIGRPGY+VTKQ D+E  Q+SLLFQI+YPEI +   PRHRFMS+YEQR++P D+R+QYLL AAEPYE IAFKVPS EIDK+  KF++HW+ ++K F 
Subjt:  KTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFT

Query:  LQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQ
        LQ +FK +     KP   P+      LP  P     PPPP   G PPR   PP+P +LPPPPP     PP P P G AP  PP PP     M    PG  
Subjt:  LQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQ

Query:  MNRLPMPPPPQGF--PGQGVRQPPP--PPPNMG
             + PP  G   P  GV  P P   PP  G
Subjt:  MNRLPMPPPPQGF--PGQGVRQPPP--PPPNMG

Arabidopsis top hitse value%identityAlignment
AT2G32600.1 hydroxyproline-rich glycoprotein family protein4.7e-11981.56Show/hide
Query:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR
        MDREWGSKPGSGGAAS QNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAK+AP +PQP KR
Subjt:  MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKR

Query:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD
         VSVR+TVKIGRPGYRVTKQ+D E +QRSLLFQIEYPEIED  KPRHRFMSSYEQ+VQP+DK YQYLLFAAEPYEIIAFKVPSTE+DKSTPKFFSHWDPD
Subjt:  KVSVRKTVKIGRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPD

Query:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGG
        SKMFTLQ+YFK    E NKPQ+   ANG          PPPPPPPP Q  P   PPPP  G  PPPPP MAN   RPMPP G
Subjt:  SKMFTLQLYFKSKPLEANKPQTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGG

AT5G07740.1 actin binding3.5e-0549.19Show/hide
Query:  ANKPQTVPAANGTVPLPPPPQ-----APPPPPPPPQQGAPPRVPPPPM-PGSLPPPPPVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGTQMN
        A  P   P  +G  P PPPP      APPPPPPPP  G  P  PPPPM  G+ PPPPP M  G P P PP   GGAPP PPPP  G        P     
Subjt:  ANKPQTVPAANGTVPLPPPPQ-----APPPPPPPPQQGAPPRVPPPPM-PGSLPPPPPVMANGPPRPMPP---GGAPPIPPPPPVGNNTMANFTPGTQMN

Query:  RLPMPPPPQGFPGQGVRQPPPPPP
          P PPPP   P +G   PPPPPP
Subjt:  RLPMPPPPQGFPGQGVRQPPPPPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAGAGAGTGGGGGTCCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGA
TCTCGCCAAGGATCCCTACTTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACGCAGGGGA
AGCGCCATCAGACTAATTTGGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATT
GGGAGGCCTGGTTATCGAGTAACGAAGCAATTTGATTCCGAGACAAAGCAGAGATCTCTGCTTTTCCAAATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACA
CCGGTTTATGTCCTCTTATGAGCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCCTATGAGATAATTGCATTCAAGGTTCCAAGCA
CAGAGATTGACAAATCCACACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGTTGCAGTTGTATTTTAAATCCAAACCACTAGAGGCAAACAAGCCA
CAAACTGTGCCTGCAGCCAATGGAACGGTGCCATTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCC
TCCGATGCCTGGATCCTTGCCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCAGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTA
ATAACACAATGGCGAATTTCACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGCTTCCCAGGCCAGGGTGTCCGTCAGCCACCCCCTCCGCCA
CCCAATATGGGATAG
mRNA sequenceShow/hide mRNA sequence
AGGGCTTCTTAGGTCGCCGGAGAAAGGAGAGGGCTTTTTCTCAGTCGGAAATCGAAATTCAGTAAAGAAGCGACACCGGAGTTTGACGGCGATGGATAGAGAGTGGGGGT
CCAAGCCGGGAAGTGGAGGAGCGGCCTCTGCACAGAATGAAGCTATCGATCGGAGAGAGCGTCTTCGACGGCTTGCTCTCGAGACCATCGATCTCGCCAAGGATCCCTAC
TTTATGCGCAATCATCTTGGAAGTTATGAGTGTAAGCTTTGCTTGACTCTGCACAATAATGAGGGAAATTACTTGGCGCACACGCAGGGGAAGCGCCATCAGACTAATTT
GGCGAAGAGAGCAGCCCGTGAAGCCAAGGAGGCTCCTGCTCAACCTCAACCCCACAAGCGGAAGGTCTCTGTTCGCAAAACAGTTAAAATTGGGAGGCCTGGTTATCGAG
TAACGAAGCAATTTGATTCCGAGACAAAGCAGAGATCTCTGCTTTTCCAAATTGAATACCCAGAAATTGAAGACCTAGCAAAGCCAAGACACCGGTTTATGTCCTCTTAT
GAGCAGCGGGTGCAACCGTTCGATAAAAGATACCAATATCTTCTGTTTGCAGCTGAACCCTATGAGATAATTGCATTCAAGGTTCCAAGCACAGAGATTGACAAATCCAC
ACCAAAATTCTTCTCTCACTGGGATCCAGACTCGAAAATGTTCACGTTGCAGTTGTATTTTAAATCCAAACCACTAGAGGCAAACAAGCCACAAACTGTGCCTGCAGCCA
ATGGAACGGTGCCATTGCCGCCACCACCACAAGCTCCACCACCGCCCCCACCTCCACCACAGCAAGGGGCACCACCAAGAGTTCCTCCTCCTCCGATGCCTGGATCCTTG
CCGCCTCCCCCTCCTGTAATGGCAAATGGTCCTCCTAGGCCAATGCCTCCAGGTGGAGCTCCGCCCATCCCTCCACCGCCTCCAGTTGGTAATAACACAATGGCGAATTT
CACTCCTGGTACTCAGATGAATAGACTTCCCATGCCACCTCCCCCACAGGGCTTCCCAGGCCAGGGTGTCCGTCAGCCACCCCCTCCGCCACCCAATATGGGATAGGCCA
CAGAATATCAGTTAAGTAGAATGGTTTGAGAAGACAATTTGGTACTGGACGTTCAACGTTCGGTGGACTTTAATCGTTGGCCTCACTAGTGAAAGTTTGAAGCACTTTTC
CATTGTATCCTCTTCATATTTTGGCATGTAGAATCTTAACATACCTTGATTGTTGTATCCTTTCAGGCAAAGTAAAAGAATTTTGTT
Protein sequenceShow/hide protein sequence
MDREWGSKPGSGGAASAQNEAIDRRERLRRLALETIDLAKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLAKRAAREAKEAPAQPQPHKRKVSVRKTVKI
GRPGYRVTKQFDSETKQRSLLFQIEYPEIEDLAKPRHRFMSSYEQRVQPFDKRYQYLLFAAEPYEIIAFKVPSTEIDKSTPKFFSHWDPDSKMFTLQLYFKSKPLEANKP
QTVPAANGTVPLPPPPQAPPPPPPPPQQGAPPRVPPPPMPGSLPPPPPVMANGPPRPMPPGGAPPIPPPPPVGNNTMANFTPGTQMNRLPMPPPPQGFPGQGVRQPPPPP
PNMG