; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00977 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00977
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description29 kDa ribonucleoprotein, chloroplastic-like
Genome locationCarg_Chr06:1809523..1810510
RNA-Seq ExpressionCarg00977
SyntenyCarg00977
Gene Ontology termsGO:0006811 - ion transport (biological process)
GO:0055085 - transmembrane transport (biological process)
GO:1901259 - chloroplast rRNA processing (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0016020 - membrane (cellular component)
GO:0003729 - mRNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596475.1 RNA-binding protein CP29B, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.2e-91100Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

KAG7028023.1 RNA-binding protein CP29B, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]1.2e-91100Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

XP_022935639.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita moschata]4.7e-9199.44Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFV NVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

XP_023005862.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita maxima]4.8e-8897.22Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFL LSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALV RS RVSPAFFSRFV NVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVN GPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

XP_023538708.1 29 kDa ribonucleoprotein, chloroplastic-like [Cucurbita pepo subsp. pepo]3.0e-9098.89Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFLTLSSLTPKTLSFSNPKF LFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFV NVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

TrEMBL top hitse value%identityAlignment
A0A0A0LAY6 Uncharacterized protein5.8e-7182.32Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNP-SSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNL
        M+ASA  LTL SLT KTLS SNPKF+LFSLNP SSI   SNPISIS+ +L S RVSP F SRFV NVAVSSD+ QEE  L+VDGDDSSYAPDL+LFVGNL
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNP-SSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNL

Query:  PFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        PFT+DSAQLAGLFESAGQVERVEVIYDK TGRSRGFGFVTMS V E EAAAQQFNGYEL+GR LRVNYGPPPPKRDDSSFR
Subjt:  PFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

A0A5A7TQA3 29 kDa ribonucleoprotein7.8e-6880Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        M+ASA  LTLSSLT KTLS SNPKF+LFSLNPSS     NPISIS+ VL S RVS  F SRFV NVAVSSD+DQEED L+ DGDDS YAPDL+LFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        F++DSAQLAGLFESAGQVERVEVIYDK TG+SRGFGFVTMS V E EAAAQQFNGYEL+GR LRVNYG PPPKRDDS FR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

A0A6J1CU52 29 kDa ribonucleoprotein A, chloroplastic-like3.2e-6978.77Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        M ASAT L LSSLTPKTLS SNP+ +LFSLNPSSI   SN ISISA  +RSDR SPAF SRF+ NVAVSSDFDQEEDVL+  GDD SYA DL+LFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSF
        F++DSAQLAGLFESAG+VERVEVIYDK TGRSRGFGFVTMSN    EAAA+QFNGYEL+GR LRVNYGPPPPK+D+ SF
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSF

A0A6J1F601 29 kDa ribonucleoprotein, chloroplastic-like2.3e-9199.44Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFV NVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

A0A6J1KUB7 29 kDa ribonucleoprotein, chloroplastic-like2.3e-8897.22Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
        MAASATFL LSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALV RS RVSPAFFSRFV NVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLP

Query:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVN GPPPPKRDDSSFR
Subjt:  FTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

SwissProt top hitse value%identityAlignment
P49313 30 kDa ribonucleoprotein, chloroplastic6.0e-4156.28Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVD---GDDSSYAPDLQLFVG
        MA+SA+ L   SLTP+TL    P  +  SL+  S+   S  +S+S+        S  F SRFV  V +  DFDQ EDV D D    ++ +++PDL++FVG
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVD---GDDSSYAPDLQLFVG

Query:  NLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        NL F+ DSA LA LFE AG VE VEVIYDK+TGRSRGFGFVTMS+  E EAA QQFNGYEL+GR LRVN GPPP KR++SSFR
Subjt:  NLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

P49314 31 kDa ribonucleoprotein, chloroplastic8.1e-3854.24Show/hide
Query:  ASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLPFT
        +S  FL ++S TP +L   N     FSL  SS+    +  SI      S  + P F S F + VA+ SDFDQ ED ++V  +   ++ DL+LFVGNLPF+
Subjt:  ASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLPFT

Query:  IDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSF
        +DSA LAGLFE AG VE VEVIYDK++GRSRGFGFVTMS   E EAA QQFNGYE++GR +RVN GP P KR++SSF
Subjt:  IDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSF

Q08935 29 kDa ribonucleoprotein A, chloroplastic4.9e-4358.47Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDG---DDSSYAPDLQLFVG
        MA+SA+ L   SLTP+TL    P     +   +S+ F S P S   L L S   S  F SRFV  V + SDFDQ EDV D D    ++ +++PDL++FVG
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDG---DDSSYAPDLQLFVG

Query:  NLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        NLPF+ DSA LA LFE AG VE VEVIYDK+TGRSRGFGFVTMS+  E EAA QQFNGYEL+GR LRVN GPPP KR++SSFR
Subjt:  NLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

Q43349 29 kDa ribonucleoprotein, chloroplastic9.6e-4759.26Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD
        M+ASA+  +LS+  PK+L     +    S+ P S+ F+ +   + ++   S     SPA + SRFV NVAVSSDF+ EED +  DGDDS      S++PD
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD

Query:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        L+LFVGNL F +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS  AE EAAAQQFNGYE EGRPLRVN GPPPPKR++S  R
Subjt:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

Q9ZUU4 RNA-binding protein CP29B, chloroplastic9.6e-4760.99Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEED-VLDV-DGDDSSYAPDLQLFVGN
        MAASA+ L LSS  PK+L F   +    SL   S+ F+ N  S+S   + +   SPA  SRF  NVA++S+F+ EED   DV    + S++ DL+LFVGN
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEED-VLDV-DGDDSSYAPDLQLFVGN

Query:  LPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        LPF +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS+V+E EAAAQQFNGYEL+GRPLRVN GPPPPKR+D   R
Subjt:  LPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

Arabidopsis top hitse value%identityAlignment
AT2G37220.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.8e-4860.99Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEED-VLDV-DGDDSSYAPDLQLFVGN
        MAASA+ L LSS  PK+L F   +    SL   S+ F+ N  S+S   + +   SPA  SRF  NVA++S+F+ EED   DV    + S++ DL+LFVGN
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEED-VLDV-DGDDSSYAPDLQLFVGN

Query:  LPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        LPF +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS+V+E EAAAQQFNGYEL+GRPLRVN GPPPPKR+D   R
Subjt:  LPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

AT3G53460.1 chloroplast RNA-binding protein 296.8e-4859.26Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD
        M+ASA+  +LS+  PK+L     +    S+ P S+ F+ +   + ++   S     SPA + SRFV NVAVSSDF+ EED +  DGDDS      S++PD
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD

Query:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        L+LFVGNL F +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS  AE EAAAQQFNGYE EGRPLRVN GPPPPKR++S  R
Subjt:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

AT3G53460.2 chloroplast RNA-binding protein 296.8e-4859.26Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD
        M+ASA+  +LS+  PK+L     +    S+ P S+ F+ +   + ++   S     SPA + SRFV NVAVSSDF+ EED +  DGDDS      S++PD
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD

Query:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        L+LFVGNL F +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS  AE EAAAQQFNGYE EGRPLRVN GPPPPKR++S  R
Subjt:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

AT3G53460.3 chloroplast RNA-binding protein 296.8e-4859.26Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD
        M+ASA+  +LS+  PK+L     +    S+ P S+ F+ +   + ++   S     SPA + SRFV NVAVSSDF+ EED +  DGDDS      S++PD
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD

Query:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR
        L+LFVGNL F +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS  AE EAAAQQFNGYE EGRPLRVN GPPPPKR++S  R
Subjt:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR

AT3G53460.4 chloroplast RNA-binding protein 293.5e-4453.33Show/hide
Query:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD
        M+ASA+  +LS+  PK+L     +    S+ P S+ F+ +   + ++   S     SPA + SRFV NVAVSSDF+ EED +  DGDDS      S++PD
Subjt:  MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRS--DRVSPAFF-SRFVSNVAVSSDFDQEEDVLDVDGDDS------SYAPD

Query:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGY---------------------ELEGRPLRVNYGPP
        L+LFVGNL F +DSAQLA LFESAG VE VEVIYDK+TGRSRGFGFVTMS  AE EAAAQQFNGY                     E EGRPLRVN GPP
Subjt:  LQLFVGNLPFTIDSAQLAGLFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGY---------------------ELEGRPLRVNYGPP

Query:  PPKRDDSSFR
        PPKR++S  R
Subjt:  PPKRDDSSFR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCTGCGACGTTCCTCACGCTTTCATCCCTAACCCCTAAAACCCTATCTTTTTCTAACCCTAAATTCGAACTTTTCTCGCTCAATCCATCTTCCATTGGCTT
TCGGTCGAATCCGATTTCCATATCCGCTTTGGTTCTTCGTTCTGATAGGGTTTCTCCGGCGTTCTTCTCACGATTCGTTAGTAATGTCGCTGTCTCATCCGATTTTGACC
AGGAGGAAGATGTCCTCGACGTCGATGGAGATGATTCCAGCTACGCTCCTGACCTCCAACTCTTCGTCGGAAATCTTCCTTTCACTATTGACAGTGCTCAACTCGCCGGT
TTATTCGAAAGCGCCGGACAAGTTGAGAGGGTCGAGGTGATTTACGACAAGATGACGGGACGAAGCAGGGGATTTGGTTTTGTCACTATGTCGAATGTTGCAGAGGCTGA
AGCAGCTGCTCAACAATTTAATGGCTATGAACTCGAGGGTAGACCACTGAGGGTAAATTATGGACCCCCTCCACCAAAAAGGGACGATTCCTCTTTTAGG
mRNA sequenceShow/hide mRNA sequence
AAGCCTTATCTCAAAAAGCTCGGAAGCCATGGCTGCCTCTGCGACGTTCCTCACGCTTTCATCCCTAACCCCTAAAACCCTATCTTTTTCTAACCCTAAATTCGAACTTT
TCTCGCTCAATCCATCTTCCATTGGCTTTCGGTCGAATCCGATTTCCATATCCGCTTTGGTTCTTCGTTCTGATAGGGTTTCTCCGGCGTTCTTCTCACGATTCGTTAGT
AATGTCGCTGTCTCATCCGATTTTGACCAGGAGGAAGATGTCCTCGACGTCGATGGAGATGATTCCAGCTACGCTCCTGACCTCCAACTCTTCGTCGGAAATCTTCCTTT
CACTATTGACAGTGCTCAACTCGCCGGTTTATTCGAAAGCGCCGGACAAGTTGAGAGGGTCGAGGTGATTTACGACAAGATGACGGGACGAAGCAGGGGATTTGGTTTTG
TCACTATGTCGAATGTTGCAGAGGCTGAAGCAGCTGCTCAACAATTTAATGGCTATGAACTCGAGGGTAGACCACTGAGGGTAAATTATGGACCCCCTCCACCAAAAAGG
GACGATTCCTCTTTTAGG
Protein sequenceShow/hide protein sequence
MAASATFLTLSSLTPKTLSFSNPKFELFSLNPSSIGFRSNPISISALVLRSDRVSPAFFSRFVSNVAVSSDFDQEEDVLDVDGDDSSYAPDLQLFVGNLPFTIDSAQLAG
LFESAGQVERVEVIYDKMTGRSRGFGFVTMSNVAEAEAAAQQFNGYELEGRPLRVNYGPPPPKRDDSSFR