; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg00989 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg00989
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger protein JACKDAW
Genome locationCarg_Chr06:1760286..1762421
RNA-Seq ExpressionCarg00989
SyntenyCarg00989
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596467.1 Zinc finger protein ENHYDROUS, partial [Cucurbita argyrosperma subsp. sororia]1.9e-8498.33Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
        +QNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT

Query:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQM  N
Subjt:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

KAG7028012.1 hypothetical protein SDJN02_09191, partial [Cucurbita argyrosperma subsp. argyrosperma]4.0e-122100Show/hide
Query:  MSKQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSK
        MSKQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSK
Subjt:  MSKQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSK

Query:  ATAAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSNEGFPRCRRRRTASATVPP
        ATAAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSNEGFPRCRRRRTASATVPP
Subjt:  ATAAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSNEGFPRCRRRRTASATVPP

Query:  AGACKIRRHKLNNGTKPIQPLKPHQIQSKLKCKAAETVRR
        AGACKIRRHKLNNGTKPIQPLKPHQIQSKLKCKAAETVRR
Subjt:  AGACKIRRHKLNNGTKPIQPLKPHQIQSKLKCKAAETVRR

XP_022950792.1 zinc finger protein JACKDAW [Cucurbita moschata]7.4e-8497.78Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
        +QNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG+LSKAT
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT

Query:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQM  N
Subjt:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

XP_023005950.1 zinc finger protein JACKDAW [Cucurbita maxima]4.6e-7893.33Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
        +QNNLESLGDVPGLSQFSNSDNFLRDFEE QHKNRSPLSLWLNQASVDNA+ NNNNISHFFGASSSSSNLFGSMTESGLSVLP+IEKEDV+NKG++SKAT
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT

Query:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNS LFGAG FGVMSSSSSSLNSFNKSRSPTMADSVQM  N
Subjt:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

XP_023540310.1 zinc finger protein JACKDAW [Cucurbita pepo subsp. pepo]2.2e-8094.48Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAI-NNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKA
        +QNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNA+ NNNNNISHFFGASSSSSNLFGSMTESGLSVLP+IEKEDVDNKG+LSKA
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAI-NNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKA

Query:  TAAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        TAAA+LLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRS TMADS+QM  N
Subjt:  TAAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

TrEMBL top hitse value%identityAlignment
A0A0A0LDZ1 C2H2-type domain-containing protein3.6e-6075.79Show/hide
Query:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-
        +SLGD+ GLSQF+N SD+FLRDFE+HQ KNRSPLSLWLNQAS +NAIN+NN+IS+FFGASSSSSNLFGS+TE+GLS+LP++EKEDV+NKG   N SKAT 
Subjt:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-

Query:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM
          AAA L GQSSQS VSSSPMSATALLQKAALMGSTRS NNNN+PLFG+GAFGVMSSSS           SSLNS NKSRS TM DSVQM
Subjt:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM

A0A1S3B706 protein indeterminate-domain 92.7e-6378.95Show/hide
Query:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-
        +SLGD+ GLSQF+N SD+FLRDFE+HQ KNRSPLSLWLNQAS +NAINNNNNIS+FFGASSSSSNLFGS+TE+GLS+LP++EKEDV+NKG   N SKAT 
Subjt:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-

Query:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM
          AAA L GQSSQS VSSSPMSATALLQKAALMGSTRSSNNNNSPLFG+GAFGVMSSSS           SSLNSFNKSRS TMADSVQM
Subjt:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM

A0A5D3DNM0 Protein indeterminate-domain 92.7e-6378.95Show/hide
Query:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-
        +SLGD+ GLSQF+N SD+FLRDFE+HQ KNRSPLSLWLNQAS +NAINNNNNIS+FFGASSSSSNLFGS+TE+GLS+LP++EKEDV+NKG   N SKAT 
Subjt:  ESLGDVPGLSQFSN-SDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG---NLSKAT-

Query:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM
          AAA L GQSSQS VSSSPMSATALLQKAALMGSTRSSNNNNSPLFG+GAFGVMSSSS           SSLNSFNKSRS TMADSVQM
Subjt:  --AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSS-----------SSLNSFNKSRSPTMADSVQM

A0A6J1GFV0 zinc finger protein JACKDAW3.6e-8497.78Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
        +QNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKG+LSKAT
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT

Query:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQM  N
Subjt:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

A0A6J1KYU7 zinc finger protein JACKDAW2.2e-7893.33Show/hide
Query:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT
        +QNNLESLGDVPGLSQFSNSDNFLRDFEE QHKNRSPLSLWLNQASVDNA+ NNNNISHFFGASSSSSNLFGSMTESGLSVLP+IEKEDV+NKG++SKAT
Subjt:  KQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKAT

Query:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN
        AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNS LFGAG FGVMSSSSSSLNSFNKSRSPTMADSVQM  N
Subjt:  AAAALLGQSSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAAACAAAACAACCTTGAATCTCTTGGAGATGTTCCTGGGCTTTCCCAATTCAGTAATTCAGATAATTTCTTGAGAGATTTTGAAGAACACCAACACAAGAACAG
ATCTCCATTGTCCCTTTGGTTAAACCAAGCTTCTGTTGATAATGCAATCAACAACAACAACAACATTTCCCACTTTTTTGGAGCTTCTTCTTCCTCCTCCAATCTTTTCG
GATCGATGACCGAAAGCGGGCTTTCGGTATTGCCGCTGATTGAGAAGGAAGACGTTGACAACAAGGGAAATTTGTCGAAGGCTACGGCGGCCGCCGCATTGTTAGGTCAA
TCTTCTCAGTCGTTTGTTTCGTCTTCTCCGATGTCGGCCACTGCCCTTCTACAAAAAGCTGCTCTTATGGGCTCTACTAGAAGTAGCAACAATAATAATTCTCCGCTCTT
TGGAGCTGGCGCGTTCGGAGTAATGAGCTCGTCGTCTTCATCGTTGAACTCGTTTAATAAATCTAGAAGCCCGACAATGGCCGACTCGGTGCAGATGCGGTCAAACGAGG
GATTTCCTCGGTGTCGGAGGAGGAGAACCGCCTCGGCCACCGTTCCTCCCGCCGGAGCTTGCAAAATTCGCCGCCATAAACTCAACAATGGGACTAAGCCAATTCAACCA
CTAAAACCCCATCAAATTCAATCAAAATTGAAGTGCAAGGCGGCGGAAACGGTCAGAAGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAAACAAAACAACCTTGAATCTCTTGGAGATGTTCCTGGGCTTTCCCAATTCAGTAATTCAGATAATTTCTTGAGAGATTTTGAAGAACACCAACACAAGAACAG
ATCTCCATTGTCCCTTTGGTTAAACCAAGCTTCTGTTGATAATGCAATCAACAACAACAACAACATTTCCCACTTTTTTGGAGCTTCTTCTTCCTCCTCCAATCTTTTCG
GATCGATGACCGAAAGCGGGCTTTCGGTATTGCCGCTGATTGAGAAGGAAGACGTTGACAACAAGGGAAATTTGTCGAAGGCTACGGCGGCCGCCGCATTGTTAGGTCAA
TCTTCTCAGTCGTTTGTTTCGTCTTCTCCGATGTCGGCCACTGCCCTTCTACAAAAAGCTGCTCTTATGGGCTCTACTAGAAGTAGCAACAATAATAATTCTCCGCTCTT
TGGAGCTGGCGCGTTCGGAGTAATGAGCTCGTCGTCTTCATCGTTGAACTCGTTTAATAAATCTAGAAGCCCGACAATGGCCGACTCGGTGCAGATGCGGTCAAACGAGG
GATTTCCTCGGTGTCGGAGGAGGAGAACCGCCTCGGCCACCGTTCCTCCCGCCGGAGCTTGCAAAATTCGCCGCCATAAACTCAACAATGGGACTAAGCCAATTCAACCA
CTAAAACCCCATCAAATTCAATCAAAATTGAAGTGCAAGGCGGCGGAAACGGTCAGAAGGTGACGGCGGCGGGGGCCACCGGCGAATGTTGAAAGTTGACAGTTTTAAGA
AAGTAGTAAAAACGGCCATGCATTTAACTTCTTCTTTGTTTCTTCTTCTTGTTATTTTATATTTTGTCGTTTGAACTTTTTTTTTCTTTTTTTTTTCGTAATTTCGCTTT
CAAATTATTGCATTTGCCAGCGAAAACTACTTTATTATATATAAATAT
Protein sequenceShow/hide protein sequence
MSKQNNLESLGDVPGLSQFSNSDNFLRDFEEHQHKNRSPLSLWLNQASVDNAINNNNNISHFFGASSSSSNLFGSMTESGLSVLPLIEKEDVDNKGNLSKATAAAALLGQ
SSQSFVSSSPMSATALLQKAALMGSTRSSNNNNSPLFGAGAFGVMSSSSSSLNSFNKSRSPTMADSVQMRSNEGFPRCRRRRTASATVPPAGACKIRRHKLNNGTKPIQP
LKPHQIQSKLKCKAAETVRR