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Carg01002 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01002
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionLow temperature and salt responsive protein family
Genome locationCarg_Chr06:1704898..1705346
RNA-Seq ExpressionCarg01002
SyntenyCarg01002
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR000612 - Proteolipid membrane potential modulator


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137807.1 low temperature-induced protein lt101.2 [Cucumis sativus]1.1e-2185.48Show/hide
Query:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        Q +RIPKRMGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGIIYAVYVL+G
Subjt:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

XP_008442650.1 PREDICTED: low temperature-induced protein lt101.2-like [Cucumis melo]1.1e-2185.48Show/hide
Query:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+G
Subjt:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

XP_022145681.1 low temperature-induced protein lt101.2-like [Momordica charantia]3.3e-2387.5Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
        MQG+RIPKRMGSATF+EVL+A+FIPPLGVFLRYGIG+EFWI L+LTFLGYLPGI+YAVYVLVGM
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM

XP_022945600.1 low temperature-induced protein lt101.2-like [Cucurbita moschata]9.3e-26100Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
        MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM

XP_038906189.1 low temperature-induced protein lt101.2-like [Benincasa hispida]2.5e-2390.48Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        MQG+RIPKRMGSATF+EVL+AIFIPPLGVFLRYGIG+EFWIDLVLT  GYLPGIIYAVYVLVG
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

TrEMBL top hitse value%identityAlignment
A0A0A0LAU7 Uncharacterized protein5.1e-2285.48Show/hide
Query:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        Q +RIPKRMGSATF+EVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGIIYAVYVL+G
Subjt:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

A0A1S3B667 low temperature-induced protein lt101.2-like5.1e-2285.48Show/hide
Query:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        Q +RIPKRMGSATFVEVL+AIFIPP+GVFLRYGIG+EFWIDLVLTF GY+PGI+YAVYVL+G
Subjt:  QGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

A0A6J1CX15 low temperature-induced protein lt101.2-like1.6e-2387.5Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
        MQG+RIPKRMGSATF+EVL+A+FIPPLGVFLRYGIG+EFWI L+LTFLGYLPGI+YAVYVLVGM
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM

A0A6J1G1E1 low temperature-induced protein lt101.2-like4.5e-26100Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
        MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM

A0A6J1KU26 low temperature-induced protein lt101.2-like4.5e-26100Show/hide
Query:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
        MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM
Subjt:  MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM

SwissProt top hitse value%identityAlignment
P68178 Salt stress-induced hydrophobic peptide ESI32.6e-1575.47Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV
        MGSAT +EV++AI +PP+GVFLRY +GVEFWI L+LT LGY+PGIIYAVYVLV
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV

P68179 Low temperature-induced protein lt101.12.6e-1575.47Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV
        MGSAT +EV++AI +PP+GVFLRY +GVEFWI L+LT LGY+PGIIYAVYVLV
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV

Q9ARD5 Low temperature-induced protein lt101.26.9e-1675.47Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV
        M SATF+EV++AI +PP+GVFLRYG+ VEFWI L+LT LGY+PGIIYAVYVLV
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLV

Q9ZNQ7 Hydrophobic protein RCI2A1.5e-1575Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL
        M +ATFV+++IAI +PPLGVFLR+G GVEFWI LVLT LGY+PGIIYA+YVL
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL

Q9ZNS6 Hydrophobic protein RCI2B3.2e-1363.46Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL
        M +ATFVE+++AI +PPLGVFL++G  VEFWI L+LT  GYLPGI+YA+Y++
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL

Arabidopsis top hitse value%identityAlignment
AT1G57550.1 Low temperature and salt responsive protein family1.5e-1367.31Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL
        MGS  F+EVL AIFIPP+GVFLRYG+G+EFW+ L+LT   ++PG+IYA+YVL
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL

AT2G38905.1 Low temperature and salt responsive protein family9.9e-1874.07Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG
        MGS TF+E+++AI +PP+GVFLRYG GVEFWI L+LT LGY+PGIIYA+YVLVG
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVG

AT3G05880.1 Low temperature and salt responsive protein family1.1e-1675Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL
        M +ATFV+++IAI +PPLGVFLR+G GVEFWI LVLT LGY+PGIIYA+YVL
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL

AT3G05890.1 Low temperature and salt responsive protein family2.3e-1463.46Show/hide
Query:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL
        M +ATFVE+++AI +PPLGVFL++G  VEFWI L+LT  GYLPGI+YA+Y++
Subjt:  MGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVL

AT4G30650.1 Low temperature and salt responsive protein family6.5e-0967.35Show/hide
Query:  FVEVLIAIFIPPLGVFLRYG-IGVEFWIDLVLTFLGYLPGIIYAVYVLV
        F E+LIAI +PPLGV L+ G   VEF I LVLT LGY+PGIIYA+YV+V
Subjt:  FVEVLIAIFIPPLGVFLRYG-IGVEFWIDLVLTFLGYLPGIIYAVYVLV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAAGGCGAACGAATCCCAAAGCGAATGGGCTCAGCCACCTTCGTAGAAGTTCTTATCGCTATCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTATGGCATTGGGGT
AGAATTTTGGATTGATTTGGTGCTCACATTTTTGGGGTACCTTCCTGGAATTATTTACGCCGTTTATGTTTTGGTGGGGATGTGA
mRNA sequenceShow/hide mRNA sequence
AAGAGGTTTTAAAAGGGGGGCGATGAAGAGGTCTGGGCTCGCGGCGGCTATTAGCTAAGGGCTACGTGAAAATGCAAGGCGAACGAATCCCAAAGCGAATGGGCTCAGCC
ACCTTCGTAGAAGTTCTTATCGCTATCTTCATCCCTCCCCTCGGCGTCTTCCTCCGCTATGGCATTGGGGTAGAATTTTGGATTGATTTGGTGCTCACATTTTTGGGGTA
CCTTCCTGGAATTATTTACGCCGTTTATGTTTTGGTGGGGATGTGATGAAAAAAATATTGTTTTTTTATTTTTTTATTT
Protein sequenceShow/hide protein sequence
MQGERIPKRMGSATFVEVLIAIFIPPLGVFLRYGIGVEFWIDLVLTFLGYLPGIIYAVYVLVGM