; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg01062 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01062
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:1393973..1394727
RNA-Seq ExpressionCarg01062
SyntenyCarg01062
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG2690634.1 hypothetical protein I3760_09G197200 [Carya illinoinensis]1.5e-0484.38Show/hide
Query:  MGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
        MGL L+ STGPPIKRRAGL+IKQAGR SYSGS
Subjt:  MGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
KAG6596393.1 Transcription factor LHW, partial [Cucurbita argyrosperma subsp. sororia]3.3e-1583.93Show/hide
Query:  IRVLALLELLIFDSARVVEEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSS
        I VLALLELLIFDSARVVEEGGGGVCSAMGLWLLASTGPPIKRRA L +K+   +S
Subjt:  IRVLALLELLIFDSARVVEEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSS
KAG7017270.1 hypothetical protein SDJN02_19133, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-1145.92Show/hide
Query:  LEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVVEEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
        +EKA++A+ RS+F ++                      +  + L      ++   +  G GG  SAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
Subjt:  LEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVVEEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
KAG7027939.1 hypothetical protein SDJN02_09118, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-74100Show/hide
Query:  MMWRARPSIRTPEVAKKSGWKERHKVTGDRWWRLGCINTRIALELEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVV
        MMWRARPSIRTPEVAKKSGWKERHKVTGDRWWRLGCINTRIALELEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVV
Subjt:  MMWRARPSIRTPEVAKKSGWKERHKVTGDRWWRLGCINTRIALELEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVV

Query:  EEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
        EEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
Subjt:  EEGGGGVCSAMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
KAG8647666.1 hypothetical protein MANES_09G095750v8 [Manihot esculenta]1.5e-0484.85Show/hide
Query:  AMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
        AMGL +L STGPPIKRRAGLRIKQAGR SY GS
Subjt:  AMGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS
TrEMBL top hitse value%identityAlignment
A0A6J5VU64 Uncharacterized protein8.2e-0468.29Show/hide
Query:  GGGVCSAMGL--WLLASTGPPIKRRAGLRIKQAGRSSYSGS
        G G+C  MG    LLA+ GPPIKRRAGLR KQAGR SY GS
Subjt:  GGGVCSAMGL--WLLASTGPPIKRRAGLRIKQAGRSSYSGS
A0A6J5Y7L9 Uncharacterized protein8.2e-0468.29Show/hide
Query:  GGGVCSAMGL--WLLASTGPPIKRRAGLRIKQAGRSSYSGS
        G G+C  MG    LLA+ GPPIKRRAGLR KQAGR SY GS
Subjt:  GGGVCSAMGL--WLLASTGPPIKRRAGLRIKQAGRSSYSGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGTGGCGGGCCAGACCGTCCATCCGGACTCCAGAAGTTGCAAAAAAATCCGGATGGAAAGAAAGGCATAAGGTGACCGGTGACCGGTGGTGGAGGTTGGGGTGTAT
AAATACCAGGATCGCGCTTGAATTGGAAAAGGCCAGTTTGGCAATCGGCCGTTCCATGTTCCCATTCAAAGAAAGAAAGAGACAGGCTATGGAATCAACCGAATCGCCAC
GAGTTGAGAATTCTGTTAATTGCAGTATTAGAGTTTTAGCTCTATTAGAGTTGCTAATCTTTGATAGTGCTAGAGTAGTGGAGGAAGGGGGCGGGGGGGTTTGTTCAGCG
ATGGGATTATGGCTATTAGCTTCAACTGGCCCACCAATTAAACGAAGAGCGGGTCTGAGAATAAAACAGGCGGGTCGAAGTTCATATAGCGGCAGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGATGTGGCGGGCCAGACCGTCCATCCGGACTCCAGAAGTTGCAAAAAAATCCGGATGGAAAGAAAGGCATAAGGTGACCGGTGACCGGTGGTGGAGGTTGGGGTGTAT
AAATACCAGGATCGCGCTTGAATTGGAAAAGGCCAGTTTGGCAATCGGCCGTTCCATGTTCCCATTCAAAGAAAGAAAGAGACAGGCTATGGAATCAACCGAATCGCCAC
GAGTTGAGAATTCTGTTAATTGCAGTATTAGAGTTTTAGCTCTATTAGAGTTGCTAATCTTTGATAGTGCTAGAGTAGTGGAGGAAGGGGGCGGGGGGGTTTGTTCAGCG
ATGGGATTATGGCTATTAGCTTCAACTGGCCCACCAATTAAACGAAGAGCGGGTCTGAGAATAAAACAGGCGGGTCGAAGTTCATATAGCGGCAGCTAG
Protein sequenceShow/hide protein sequence
MMWRARPSIRTPEVAKKSGWKERHKVTGDRWWRLGCINTRIALELEKASLAIGRSMFPFKERKRQAMESTESPRVENSVNCSIRVLALLELLIFDSARVVEEGGGGVCSA
MGLWLLASTGPPIKRRAGLRIKQAGRSSYSGS