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Carg01088 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01088
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDUF962 domain-containing protein
Genome locationCarg_Chr06:1284737..1285075
RNA-Seq ExpressionCarg01088
SyntenyCarg01088
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR009305 - 2-hydroxy-palmitic acid dioxygenase Mpo1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PQM42170.1 uncharacterized protein Pyn_13924 [Prunus yedoensis var. nudiflora]1.8e-5389.29Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSL+EFWVFYMNQHSKPSTRRWHF+GTL SIFFFLCSLLF+WW LF VPL GYG AWYSHFFVE NVPA+FGHPFWSLLCDFKMF LMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQ F
Subjt:  KRLGKRPVLQAF
XP_004137736.1 uncharacterized protein LOC101216787 [Cucumis sativus]3.2e-5895.54Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFF+EENVPA+F HPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQ F
Subjt:  KRLGKRPVLQAF
XP_008442469.1 PREDICTED: uncharacterized protein LOC103486326 [Cucumis melo]6.5e-5997.32Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLF VPLTGYGFAWYSHFFVEENVPA+FGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
XP_022145672.1 uncharacterized protein LOC111015066 [Momordica charantia]3.8e-5998.21Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLFFVPL GYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
XP_022946132.1 uncharacterized protein LOC111450283 [Cucurbita moschata]2.7e-60100Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
TrEMBL top hitse value%identityAlignment
A0A1S4DUQ8 uncharacterized protein LOC1034863263.2e-5997.32Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLF VPLTGYGFAWYSHFFVEENVPA+FGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
A0A5A7TMP5 DUF962 domain-containing protein3.2e-5997.32Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLF VPLTGYGFAWYSHFFVEENVPA+FGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
A0A6J1CWL4 uncharacterized protein LOC1110150661.9e-5998.21Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLS+IFFFLCSLLFSWWFLFFVPL GYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
A0A6J1G2W8 uncharacterized protein LOC1114502831.3e-60100Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
A0A6J1I767 uncharacterized protein LOC1114702321.3e-60100Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQAF
        KRLGKRPVLQAF
Subjt:  KRLGKRPVLQAF
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G09085.1 Protein of unknown function (DUF962)8.8e-4674.55Show/hide
Query:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI
        MNFRS +EFW FYM QHS PSTRR HFIG ++SI   +CS+L +WWFL  VPL GYGFAWYSHFFVE NVPASFGHP WS LCD KMF LMLTG+M+RE+
Subjt:  MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREI

Query:  KRLGKRPVLQ
        KRLGKRP+LQ
Subjt:  KRLGKRPVLQ

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATTTCAGAAGTTTGGATGAGTTCTGGGTTTTCTATATGAACCAGCACTCAAAACCCTCGACGAGGCGATGGCACTTTATTGGAACTCTGTCTTCTATCTTCTTCTT
TCTTTGCTCTTTACTGTTTAGCTGGTGGTTCCTGTTCTTTGTGCCTTTGACTGGATATGGATTCGCGTGGTACAGCCATTTCTTCGTCGAGGAAAATGTTCCTGCTTCCT
TCGGTCATCCATTTTGGTCTCTTCTTTGTGATTTCAAGATGTTTGGATTGATGCTTACTGGGAACATGGACAGGGAAATCAAGAGGCTGGGGAAAAGACCTGTGTTGCAG
GCGTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGAATTTCAGAAGTTTGGATGAGTTCTGGGTTTTCTATATGAACCAGCACTCAAAACCCTCGACGAGGCGATGGCACTTTATTGGAACTCTGTCTTCTATCTTCTTCTT
TCTTTGCTCTTTACTGTTTAGCTGGTGGTTCCTGTTCTTTGTGCCTTTGACTGGATATGGATTCGCGTGGTACAGCCATTTCTTCGTCGAGGAAAATGTTCCTGCTTCCT
TCGGTCATCCATTTTGGTCTCTTCTTTGTGATTTCAAGATGTTTGGATTGATGCTTACTGGGAACATGGACAGGGAAATCAAGAGGCTGGGGAAAAGACCTGTGTTGCAG
GCGTTCTAA
Protein sequenceShow/hide protein sequence
MNFRSLDEFWVFYMNQHSKPSTRRWHFIGTLSSIFFFLCSLLFSWWFLFFVPLTGYGFAWYSHFFVEENVPASFGHPFWSLLCDFKMFGLMLTGNMDREIKRLGKRPVLQ
AF