; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg01100 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01100
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr06:1214215..1217633
RNA-Seq ExpressionCarg01100
SyntenyCarg01100
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027900.1 hypothetical protein SDJN02_09079, partial [Cucurbita argyrosperma subsp. argyrosperma]9.5e-97100Show/hide
Query:  MASASTVPAFDCFCRYLYLSHCRSSVSWLLKKFTNLGPVHWVECCRRQYGDVKTWSSSGSGYLCYYSGDQKRLNGTIKESKVPLSSSSSLFSGEDFSGSC
        MASASTVPAFDCFCRYLYLSHCRSSVSWLLKKFTNLGPVHWVECCRRQYGDVKTWSSSGSGYLCYYSGDQKRLNGTIKESKVPLSSSSSLFSGEDFSGSC
Subjt:  MASASTVPAFDCFCRYLYLSHCRSSVSWLLKKFTNLGPVHWVECCRRQYGDVKTWSSSGSGYLCYYSGDQKRLNGTIKESKVPLSSSSSLFSGEDFSGSC

Query:  VTHIMPSPHRKMMMAASKMVGNMGCLLGLLDEVDQIIVKSTEGNRIEKVWLIIVETYMLTCLVLIYLRGTKIRYTV
        VTHIMPSPHRKMMMAASKMVGNMGCLLGLLDEVDQIIVKSTEGNRIEKVWLIIVETYMLTCLVLIYLRGTKIRYTV
Subjt:  VTHIMPSPHRKMMMAASKMVGNMGCLLGLLDEVDQIIVKSTEGNRIEKVWLIIVETYMLTCLVLIYLRGTKIRYTV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCGCTTCTACAGTTCCCGCTTTCGATTGCTTCTGTCGATATCTCTATCTTTCTCATTGCAGAAGCTCGGTTTCCTGGCTTCTTAAAAAGTTCACCAATCTTGG
TCCAGTCCACTGGGTAGAATGCTGCAGGAGACAATATGGTGACGTTAAAACCTGGTCTAGCTCCGGCTCCGGTTATCTTTGCTATTACTCTGGAGACCAGAAAAGATTGA
ATGGAACTATCAAGGAATCAAAAGTTCCACTATCATCATCTTCTTCTCTGTTTTCTGGCGAGGACTTCAGTGGCTCTTGTGTTACACACATTATGCCATCTCCACATAGA
AAGATGATGATGGCAGCAAGCAAGATGGTTGGCAATATGGGTTGCTTGCTTGGTCTGCTGGATGAGGTTGATCAGATTATCGTGAAGTCAACTGAAGGAAATAGAATTGA
AAAGGTATGGCTTATCATTGTGGAAACATACATGCTGACATGTTTGGTGCTCATATATCTCAGAGGAACCAAAATAAGGTACACAGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCGCTTCTACAGTTCCCGCTTTCGATTGCTTCTGTCGATATCTCTATCTTTCTCATTGCAGAAGCTCGGTTTCCTGGCTTCTTAAAAAGTTCACCAATCTTGG
TCCAGTCCACTGGGTAGAATGCTGCAGGAGACAATATGGTGACGTTAAAACCTGGTCTAGCTCCGGCTCCGGTTATCTTTGCTATTACTCTGGAGACCAGAAAAGATTGA
ATGGAACTATCAAGGAATCAAAAGTTCCACTATCATCATCTTCTTCTCTGTTTTCTGGCGAGGACTTCAGTGGCTCTTGTGTTACACACATTATGCCATCTCCACATAGA
AAGATGATGATGGCAGCAAGCAAGATGGTTGGCAATATGGGTTGCTTGCTTGGTCTGCTGGATGAGGTTGATCAGATTATCGTGAAGTCAACTGAAGGAAATAGAATTGA
AAAGGTATGGCTTATCATTGTGGAAACATACATGCTGACATGTTTGGTGCTCATATATCTCAGAGGAACCAAAATAAGGTACACAGTTTAA
Protein sequenceShow/hide protein sequence
MASASTVPAFDCFCRYLYLSHCRSSVSWLLKKFTNLGPVHWVECCRRQYGDVKTWSSSGSGYLCYYSGDQKRLNGTIKESKVPLSSSSSLFSGEDFSGSCVTHIMPSPHR
KMMMAASKMVGNMGCLLGLLDEVDQIIVKSTEGNRIEKVWLIIVETYMLTCLVLIYLRGTKIRYTV