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Carg01111 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01111
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionselT-like protein
Genome locationCarg_Chr06:1173812..1177180
RNA-Seq ExpressionCarg01111
SyntenyCarg01111
Gene Ontology termsGO:0045454 - cell redox homeostasis (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0004791 - thioredoxin-disulfide reductase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596340.1 SelT-like protein, partial [Cucurbita argyrosperma subsp. sororia]3.3e-2997.06Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH
        MDRTRIDLLGLPIFLL TDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGI GIGH
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH

KAG7027892.1 SelT-like protein [Cucurbita argyrosperma subsp. argyrosperma]3.2e-61100Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGHWQRYQYQFLRFLFFSVSCALACPLISNFIRRY
        MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGHWQRYQYQFLRFLFFSVSCALACPLISNFIRRY
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGHWQRYQYQFLRFLFFSVSCALACPLISNFIRRY

Query:  CNNDEKYAGVIISWT
        CNNDEKYAGVIISWT
Subjt:  CNNDEKYAGVIISWT

XP_022935564.1 selT-like protein [Cucurbita moschata]2.5e-2179.1Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG
        MDRT+I LLGLPIFLLFTDIVN FTP PPKP N PP RVHYQPK + VIQEP++FPTEK+SGI GIG
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG

XP_022935717.1 selT-like protein [Cucurbita moschata]8.3e-2588.24Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH
        MDRT+IDLLGLPIFLLFTDIVN FTP PPKPAN  P RVHYQPK ESVIQEPIQFPTEKQSGI GIGH
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH

XP_023540936.1 selT-like protein [Cucurbita pepo subsp. pepo]9.2e-2485.29Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH
        MDRT+IDLLGLPIFLL TDIVN FTP PPKPAN  P RVHYQPK ESVIQEPI+FPTEKQSGI GIGH
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH

TrEMBL top hitse value%identityAlignment
A0A5D3DMW2 SelT-like protein1.0e-2080.88Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG
        MDRTRI LLGLPIFLLFTDIVN FTP PPKP AN PP RVHYQPK +SVIQEP++FPTEK+S I GIG
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG

A0A6J1F5S6 selT-like protein1.2e-2179.1Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG
        MDRT+I LLGLPIFLLFTDIVN FTP PPKP N PP RVHYQPK + VIQEP++FPTEK+SGI GIG
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG

A0A6J1F6D5 selT-like protein4.0e-2588.24Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH
        MDRT+IDLLGLPIFLLFTDIVN FTP PPKPAN  P RVHYQPK ESVIQEPIQFPTEKQSGI GIGH
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGH

A0A6J1IZR1 selT-like protein1.0e-2077.61Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG
        MDRT+I LLGLPIFLLFTDIVN FTP PPKP N PP RVHYQPK + VIQEP++FPTEK+SGI  IG
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG

E5GBE6 Selenoprotein t1.0e-2080.88Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG
        MDRTRI LLGLPIFLLFTDIVN FTP PPKP AN PP RVHYQPK +SVIQEP++FPTEK+S I GIG
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIG

SwissProt top hitse value%identityAlignment
Q9STZ2 SelT-like protein1.8e-0642.86Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGI
        MD+T++ LLGLPIFLL +D+ N FTP PPK  +  P            I E + FP +K +G+
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGI

Arabidopsis top hitse value%identityAlignment
AT3G47300.1 SELT-like protein precursor1.3e-0742.86Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGI
        MD+T++ LLGLPIFLL +D+ N FTP PPK  +  P            I E + FP +K +G+
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGI

AT5G58640.1 Selenoprotein, Rdx type3.6e-1042.5Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLP--PARVHYQPKFESVIQEPIQFPTEKQSGIEG-IGHWQRYQYQF
        MDR ++ LLGLPIFL  +D+ N FTP PPKP  + P  P  + +Q +  ++I E + FP++K SG+ G IG+    +  F
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLP--PARVHYQPKFESVIQEPIQFPTEKQSGIEG-IGHWQRYQYQF

AT5G58640.2 Selenoprotein, Rdx type3.4e-0841.25Show/hide
Query:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLP--PARVHYQPKFESVIQEPIQFPTEKQSGIEG-IGHWQRYQYQF
        MDR ++ LLGLPIFL  +D+ N FTP PPKP  + P  P  + +Q +  ++I E + FP++  SG+ G IG+    +  F
Subjt:  MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKP-ANLP--PARVHYQPKFESVIQEPIQFPTEKQSGIEG-IGHWQRYQYQF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGAACACGGATAGATCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCGTTTTACTCCTTCGCCTCCTAAACCGGCCAATCTCCCTCCAGC
TCGAGTTCACTATCAGCCTAAATTTGAATCAGTCATCCAGGAACCGATTCAATTTCCTACGGAGAAACAGAGCGGAATCGAAGGAATTGGCCATTGGCAGCGTTATCAAT
ATCAATTTCTACGTTTCTTGTTTTTCAGCGTGTCTTGTGCTTTAGCGTGTCCATTGATAAGCAACTTCATTAGAAGGTACTGCAATAACGATGAAAAATATGCTGGAGTA
ATCATTTCCTGGACTTGA
mRNA sequenceShow/hide mRNA sequence
GCGTCATATTTTCGTTTGTAAATTTTCATTTTTTCCCCCAAAACCTTCTCGTGGAAGTGAGTATCTGGTTCTCGAGAGCTTTGCATTGTTGACTCCGATGGATCGAACAC
GGATAGATCTGTTAGGGCTGCCGATCTTTCTGCTTTTTACTGATATTGTGAATCGTTTTACTCCTTCGCCTCCTAAACCGGCCAATCTCCCTCCAGCTCGAGTTCACTAT
CAGCCTAAATTTGAATCAGTCATCCAGGAACCGATTCAATTTCCTACGGAGAAACAGAGCGGAATCGAAGGAATTGGCCATTGGCAGCGTTATCAATATCAATTTCTACG
TTTCTTGTTTTTCAGCGTGTCTTGTGCTTTAGCGTGTCCATTGATAAGCAACTTCATTAGAAGGTACTGCAATAACGATGAAAAATATGCTGGAGTAATCATTTCCTGGA
CTTGAAGTTATTTTGGCGAATTATCCCCCACCCATCCCAAAGCGTCCTCTCAGTAAAGTAGTACCCGTTGTTCAATTTGGAATCGTTGCAACAATAATGGCGGGGGAACA
GATTTTTCCTAGGTTGGGGATGGCACCACCACCTTGGTACTATTCCTTGCGTGCTAATAGGTTTGGAAGCATCGCAAGCACGTGGCTGTTTGCAAATTTTATCCGGTCGT
TCTTGTTAGACGAACACGACTCTCCACAATAGTATGATATTGTCCCCTTTGAGTATAAGCTCTCGTGGCTTTGCTTTGGGCTTTCCCAAAAGGCCTCATATCAATGAAGA
CAGTATTCTTTGATTATAAACCCATGATCATTCCCTAAATTAGCCGATGTGAGACTTTCATCATCCAACAATTCTTACATAGTTCTAGAGCCTTCGAAGTATATTGCAAT
GGTGAAATGGTCTTTTCGAAGTTGAAGGAGCAGTGATTTCCTAGTGAGATCAAGTTGAGAGATGTTATTGGTAGGAAACTTTCCGGGTCGAGATTTGTCAACAACTCGGG
AGGATTTTGGTCATAGGAGCATGTTTGAGAGATAGATCCAGTTTCAATATGCCTATCCTAAACATAATCCCTGTAACGTTTCTTTCCTACGAAATCAAACTTTTAAACTT
TCAAATTTCAAAATAACTTGATTTATACTAATTAATTACCTCCTGTTTCATTAATATTTGCTTCTTATAAGGGCTAGCGAAACAGTTTGAAGCCTGCTGCGCTACCCAAA
GTAAGCCGCCGATAACCTTTTTGGCTGCCTATCAACAGGTACTAGACTTTGCTGGTGAGCAGACCAATGGTATCATTTACTAGTAACTTCGGAAATGTTTGCTTAAAAAT
GAACTAATGAGTAGTGCAGTAAAGATTTTGATAACAACATCTAGGTTTTTAAACTAAAAAAATTTAAATTTCAACTTTATTTAGAATTCACAAATCTATGAAAAAAAATT
TAAAAATTTAATCTTTTATTAGACACAATATTTAGTTTTATGTATAATTAATTCGTGGAGGACTCATTTGTCAATCTCTATATACAAAATTATCTAATATTTTTTTTATA
AGTACATCAAACTTTAGTGATTAATTTATAATATAACTAAGAAAATTCTCACCATGTACAATATTTTGATGATGAAGGGTCATTATATTTTTTTCCCATCATCACCTACT
GAAACT
Protein sequenceShow/hide protein sequence
MDRTRIDLLGLPIFLLFTDIVNRFTPSPPKPANLPPARVHYQPKFESVIQEPIQFPTEKQSGIEGIGHWQRYQYQFLRFLFFSVSCALACPLISNFIRRYCNNDEKYAGV
IISWT