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Carg01115 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01115
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionPhycobilisome rod-core linker polypeptide CpcG2 like
Genome locationCarg_Chr06:1154204..1157272
RNA-Seq ExpressionCarg01115
SyntenyCarg01115
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022935686.1 uncharacterized protein LOC111442470 [Cucurbita moschata]7.9e-2694.37Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIEDIS KAAQKKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
XP_022949523.1 uncharacterized protein LOC111452848 [Cucurbita moschata]1.4e-27100Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
XP_022983627.1 uncharacterized protein LOC111482182 [Cucurbita maxima]2.3e-2592.96Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIEDIS KAA+KKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
XP_023527736.1 uncharacterized protein LOC111790863 [Cucurbita pepo subsp. pepo]3.0e-2591.55Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEV+VNSLANSR+FQRFAVRTSKQIEDIS KA+QKKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
XP_038903248.1 uncharacterized protein LOC120089892 [Benincasa hispida]2.3e-2592.96Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIE+IS KAAQKKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
TrEMBL top hitse value%identityAlignment
A0A1S3B691 uncharacterized protein LOC1034862749.4e-2591.43Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKN
        MAGGNF+HRV SYLVNEVLVNSLANSRSFQRFAV+TSKQIEDISTKAAQKKQELAEQ+KD SKNF+SFKN
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKN
A0A6J1F5E7 uncharacterized protein LOC1114424703.8e-2694.37Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIEDIS KAAQKKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
A0A6J1GCB5 uncharacterized protein LOC1114528487.0e-28100Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
A0A6J1I5H8 uncharacterized protein LOC1114701027.0e-28100Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
A0A6J1IZW4 uncharacterized protein LOC1114821821.1e-2592.96Show/hide
Query:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
        MAGGNFMHRVVSYLVNEVLVNSLANSR+FQRFAVRTSKQIEDIS KAA+KKQELAEQ+KDLSKNF+SFKNQ
Subjt:  MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G01350.1 unknown protein1.8e-1556.72Show/hide
Query:  GGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFK
        GGNF+ RV+SY+ NE +VN LANS +FQRFAVRTSK+IE++S  AA+ ++++A+QM++ +KN +S K
Subjt:  GGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGTGGAAATTTCATGCACAGAGTAGTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTTCATTTCAAAGGTTTGCCGTGAGAACATC
AAAGCAAATTGAGGATATATCTACCAAGGCTGCCCAGAAGAAGCAAGAACTTGCAGAACAGATGAAAGATCTCTCCAAAAATTTTGAGTCTTTCAAGAACCAATAA
mRNA sequenceShow/hide mRNA sequence
GAGAGGCCTCTAGTTCTTCTACGATTAAGAACATTATAAATTGAGACTACGTGGAGTTCAGCCGCCACATACAGATCCTGGGGCTGCGTTCGAAGAAAACTAGGGCATCA
AACTATTGTCATCGCGACGATATTATTCAGGAACACGCATCAAACAGGCATCTGAATCATTATTGTTTTATTTCGATCCGTGGAAACGAGCATGGCGGGTGGAAATTTCA
TGCACAGAGTAGTTTCTTACCTCGTGAATGAGGTTCTCGTCAACAGTCTTGCGAACAGCCGTTCATTTCAAAGGTTTGCCGTGAGAACATCAAAGCAAATTGAGGATATA
TCTACCAAGGCTGCCCAGAAGAAGCAAGAACTTGCAGAACAGATGAAAGATCTCTCCAAAAATTTTGAGTCTTTCAAGAACCAATAATGCCAGAGCGGAACGTGTTATTA
CAGCATGATGTACATCCTATGCCAAAATCCAATCTTATTTTGCACGTTTTGACATAATTGCAGCTGTACTTATAGTGGTCGTAGAGTTGTACTTCAAAAGTTGTTCACGG
CCTCTTTTCATATATTGAATAATTCTATGACAGTCTATTTTAGATCTGTACTTGGACAACGGTTAGTCAACGATGCCTATGTTTGAAGCCAATTTTTCCCTTCAACTGTA
TGCATTTGCATTCTTCTGTAACGCAAGCGAACTTTTAAACGTATCTTCAAACAAAGCAAAGCCATAGCTATGAACAGTGGAACACAGATTCAATGTTAAAGCATATATGT
AGATTCATGCAACATAGAGCATTTAGGATCGTAAGCATTTATTTGGTTGAAAAAGCTCCTTGGCATTTTGCAATTCAGTAGTTTTTTTGTATATATTTTGAAGTAACAGC
ATTCCCACTCCCAAAAGGCTTTCATAAAGACATCAGAACAACTGTCTACACAAATTCAGCGTAAGCATGAATATTTATTTAAAAAGAAGTAATGAAATTATTGCTATGAG
AATAGAAACTATA
Protein sequenceShow/hide protein sequence
MAGGNFMHRVVSYLVNEVLVNSLANSRSFQRFAVRTSKQIEDISTKAAQKKQELAEQMKDLSKNFESFKNQ