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Carg01127 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01127
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDCD domain-containing protein
Genome locationCarg_Chr06:1097070..1099775
RNA-Seq ExpressionCarg01127
SyntenyCarg01127
Gene Ontology termsGO:0034976 - response to endoplasmic reticulum stress (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF3948203.1 hypothetical protein CMV_025774 [Castanea mollissima]4.8e-0859.68Show/hide
Query:  PGEVCYFCRAKKIRRSLKWTM----NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        PG+  +F   KKI   L   +    +R LH I EAAS+GQ NINPYGWTTDGSERT YPAQV
Subjt:  PGEVCYFCRAKKIRRSLKWTM----NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

KAG6580447.1 Kelch-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]2.8e-0838.02Show/hide
Query:  IDLYYKHGTLDRSLHWFASNARRLDAFKTIRT-----PGEVCYFCRAKKIRRSLKWTM--------------------------NRNLHVILEAASSGQT
        +D   +  T  R+L + A ++ RLDA +  R       G V + C    I+  L   +                           R L+ I EAASSGQ 
Subjt:  IDLYYKHGTLDRSLHWFASNARRLDAFKTIRT-----PGEVCYFCRAKKIRRSLKWTM--------------------------NRNLHVILEAASSGQT

Query:  NINPYGWTTDGSERTLYPAQV
        NINPYGWTTDGSERTLYPAQV
Subjt:  NINPYGWTTDGSERTLYPAQV

KAG7027876.1 hypothetical protein SDJN02_09053, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-99100Show/hide
Query:  MNEKWKIAKVVPLIPHIRDTCSRIDLYYKHGTLDRSLHWFASNARRLDAFKTIRTPGEVCYFCRAKKIRRSLKWTMNRNLHVILEAASSGQTNINPYGWT
        MNEKWKIAKVVPLIPHIRDTCSRIDLYYKHGTLDRSLHWFASNARRLDAFKTIRTPGEVCYFCRAKKIRRSLKWTMNRNLHVILEAASSGQTNINPYGWT
Subjt:  MNEKWKIAKVVPLIPHIRDTCSRIDLYYKHGTLDRSLHWFASNARRLDAFKTIRTPGEVCYFCRAKKIRRSLKWTMNRNLHVILEAASSGQTNINPYGWT

Query:  TDGSERTLYPAQVLPENFRTCVISPKSHDCKDTQWSSPRQCGSQSCSEALPTFVRKSVQTYSYNYAPFISGLD
        TDGSERTLYPAQVLPENFRTCVISPKSHDCKDTQWSSPRQCGSQSCSEALPTFVRKSVQTYSYNYAPFISGLD
Subjt:  TDGSERTLYPAQVLPENFRTCVISPKSHDCKDTQWSSPRQCGSQSCSEALPTFVRKSVQTYSYNYAPFISGLD

XP_022157257.1 influenza virus NS1A-binding protein homolog [Momordica charantia]1.6e-0886.49Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        NR LH I EAAS GQ NINPYGWTTDGSERTLYPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

XP_038905252.1 kelch-like protein 36 [Benincasa hispida]1.6e-0888.89Show/hide
Query:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        R LH I EAASSGQ NINPYGWTTDGSERTLYPAQV
Subjt:  RNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

TrEMBL top hitse value%identityAlignment
A0A2I4F3D6 kelch-like protein 43.0e-0863.79Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV----------LPENFRTCVIS
        NR L  I EAAS GQ NINPYGWTTDGSERTLYPAQV          LPEN    +IS
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV----------LPENFRTCVIS

A0A2N9G9P6 DCD domain-containing protein1.4e-0883.78Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAAS+GQ NINPYGWTTDGSERTLYPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

A0A5N6RJ86 DCD domain-containing protein3.0e-0881.08Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAAS+GQ NINPYGWTTDGSE+TLYPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

A0A6J1DU24 influenza virus NS1A-binding protein homolog7.9e-0986.49Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        NR LH I EAAS GQ NINPYGWTTDGSERTLYPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

A0A7J7GK30 DCD domain-containing protein3.0e-0883.78Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAASSGQ NINPY WTTDGSERTLYPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G11000.1 DCD (Development and Cell Death) domain protein5.8e-0448.65Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAAS G+ NI+   W+ +G++ + YPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

AT3G11000.2 DCD (Development and Cell Death) domain protein5.8e-0448.65Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAAS G+ NI+   W+ +G++ + YPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV

AT5G01660.1 CONTAINS InterPro DOMAIN/s: Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043), Kelch repeat type 1 (InterPro:IPR006652), Development/cell death domain (InterPro:IPR013989), Kelch related (InterPro:IPR013089), Kelch-type beta propeller (InterPro:IPR015915)2.1e-0970.27Show/hide
Query:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV
        +R LH I EAA  GQ N +PYGWT+DGSERT YPAQV
Subjt:  NRNLHVILEAASSGQTNINPYGWTTDGSERTLYPAQV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACGAAAAGTGGAAGATTGCAAAAGTTGTGCCATTGATTCCGCATATACGCGACACGTGCAGTCGCATTGACTTATACTATAAGCACGGAACACTTGATCGTAGCCT
CCACTGGTTTGCGAGTAATGCTCGCAGACTTGATGCATTTAAGACGATAAGAACTCCTGGCGAAGTCTGCTATTTTTGTAGAGCCAAAAAAATCCGGAGATCGTTAAAAT
GGACAATGAATAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAACACTTTATCCA
GCTCAGGTTTTACCAGAAAATTTCCGTACTTGTGTTATCTCTCCGAAGTCGCACGATTGTAAAGATACTCAATGGTCATCACCAAGACAATGCGGTTCACAGTCTTGTTC
GGAAGCACTGCCAACCTTTGTTAGAAAATCTGTTCAGACCTATAGTTACAACTATGCCCCATTCATTTCTGGTTTGGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGAACGAAAAGTGGAAGATTGCAAAAGTTGTGCCATTGATTCCGCATATACGCGACACGTGCAGTCGCATTGACTTATACTATAAGCACGGAACACTTGATCGTAGCCT
CCACTGGTTTGCGAGTAATGCTCGCAGACTTGATGCATTTAAGACGATAAGAACTCCTGGCGAAGTCTGCTATTTTTGTAGAGCCAAAAAAATCCGGAGATCGTTAAAAT
GGACAATGAATAGAAACTTGCATGTTATCCTTGAGGCGGCTAGTTCTGGTCAGACGAATATTAATCCATATGGGTGGACTACTGATGGTTCAGAGAGAACACTTTATCCA
GCTCAGGTTTTACCAGAAAATTTCCGTACTTGTGTTATCTCTCCGAAGTCGCACGATTGTAAAGATACTCAATGGTCATCACCAAGACAATGCGGTTCACAGTCTTGTTC
GGAAGCACTGCCAACCTTTGTTAGAAAATCTGTTCAGACCTATAGTTACAACTATGCCCCATTCATTTCTGGTTTGGACTAG
Protein sequenceShow/hide protein sequence
MNEKWKIAKVVPLIPHIRDTCSRIDLYYKHGTLDRSLHWFASNARRLDAFKTIRTPGEVCYFCRAKKIRRSLKWTMNRNLHVILEAASSGQTNINPYGWTTDGSERTLYP
AQVLPENFRTCVISPKSHDCKDTQWSSPRQCGSQSCSEALPTFVRKSVQTYSYNYAPFISGLD