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Carg01128 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01128
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSel1-like protein
Genome locationCarg_Chr06:1094507..1096128
RNA-Seq ExpressionCarg01128
SyntenyCarg01128
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR006597 - Sel1-like repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008442362.1 PREDICTED: uncharacterized protein LOC103486254 [Cucumis melo]5.7e-4693Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT DS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
XP_022157335.1 uncharacterized protein LOC111024062 [Momordica charantia]7.4e-4693Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTE L+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLT DS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
XP_022934166.1 uncharacterized protein LOC111441393 [Cucurbita moschata]5.0e-50100Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
XP_022971526.1 uncharacterized protein LOC111470221 [Cucurbita maxima]5.5e-4998Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+THDS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
XP_023538764.1 uncharacterized protein LOC111799597 [Cucurbita pepo subsp. pepo]1.2e-4898Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTEA NRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
TrEMBL top hitse value%identityAlignment
A0A1S3B5I4 uncharacterized protein LOC1034862542.7e-4693Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT DS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
A0A5D3DNP0 Sel1-like protein2.7e-4693Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTE LNRVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD+LT DS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
A0A6J1DSS4 uncharacterized protein LOC1110240623.6e-4693Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTE L+RVPLSEVVSDCVKRWFKDTL EAK GDINMQVLVGQMYYSGYG+PRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLT DS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
A0A6J1F1H3 uncharacterized protein LOC1114413932.4e-50100Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
A0A6J1I270 uncharacterized protein LOC1114702212.7e-4998Show/hide
Query:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
        ME SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD+THDS
Subjt:  METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G38450.1 CONTAINS InterPro DOMAIN/s: Sel1-like (InterPro:IPR006597)4.8e-3580.49Show/hide
Query:  VPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
        VPLS VVSDC KRWFKDTL EAK G+I MQVL+GQMYYSGYG+P+DA+KGR+W+TKASR RSSVWKV DK PGYNASDSDS+
Subjt:  VPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSD
AT5G05360.1 unknown protein2.2e-3570.65Show/hide
Query:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
        + G++ +NRVPL++VV DCV+RWF+DTL EAK GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PGYNASDSDS+D
Subjt:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDD
AT5G05360.2 unknown protein5.5e-3167.86Show/hide
Query:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN
        + G++ +NRVPL++VV DCV+RWF+DTL EAK GD+ MQVLVGQMY SGYGIP+D  KGR W+ KASR+RSS W+VSDK PG N
Subjt:  SGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYN

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACTAGCGGAGGAACAGAAGCCTTGAATCGCGTTCCGCTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGATACTTTGACAGAGGCCAAGCGTGG
GGATATCAACATGCAGGTCTTGGTTGGTCAAATGTATTATAGCGGTTATGGCATTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGAT
CATCCGTCTGGAAAGTTAGTGATAAACATCCAGGTTATAATGCTAGCGATTCGGACTCAGATGACTTGACTCACGATTCTTAA
mRNA sequenceShow/hide mRNA sequence
TCCAGACGCTAGACCTTTTTCCTGGGTTTTTCCTTTTCCTTTTCCTTTTCCATTTTTTTAACGAGCCAGAGGAAAACAGTTTCCGTACCGGCAAGAAGGAAGCGTTTTCG
GTGCCTCAGAATCTCGCCAAATCACGAAGTCAAGGTTTCGGTTGATTAATCGAAGCCGTTAGTGTTGAAATAGAATGGAGACTAGCGGAGGAACAGAAGCCTTGAATCGC
GTTCCGCTATCAGAAGTTGTTTCTGATTGCGTCAAAAGATGGTTTAAGGATACTTTGACAGAGGCCAAGCGTGGGGATATCAACATGCAGGTCTTGGTTGGTCAAATGTA
TTATAGCGGTTATGGCATTCCAAGAGATGCTCAGAAGGGAAGAATTTGGATGACAAAAGCATCAAGAAGTCGATCATCCGTCTGGAAAGTTAGTGATAAACATCCAGGTT
ATAATGCTAGCGATTCGGACTCAGATGACTTGACTCACGATTCTTAACTAGATCAGTGCTGTATGTCATGTCGAAACAACCACTGGTATCTTTAGCGCAACCTGTCTTTC
GATATTTAACTTCTTGTTCTATGGCTCTTATGTGTGACATCAATTATTCTCTGTTGCACATGTGAAAATGTTCTAGTAACAGGGAGAAAGTCGGTAAAAGTTGACGTTTT
TGCTTACTGCTTGAGGATTGATCTTTTATTTTTTATGATATGATATACCTTATTGTTGAGTTCTTAAACTTCAGCTATAAGTTGATGGTGGGGTGC
Protein sequenceShow/hide protein sequence
METSGGTEALNRVPLSEVVSDCVKRWFKDTLTEAKRGDINMQVLVGQMYYSGYGIPRDAQKGRIWMTKASRSRSSVWKVSDKHPGYNASDSDSDDLTHDS