; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg01139 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01139
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionRING-H2 finger protein ATL74-like
Genome locationCarg_Chr06:1016052..1016627
RNA-Seq ExpressionCarg01139
SyntenyCarg01139
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022157309.1 RING-H2 finger protein ATL74-like [Momordica charantia]7.5e-5563.32Show/hide
Query:  MDPNLPRRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVY
        M+ NL RRLLATE    P   N T +S+ YVGEMNLDA+MVVILAAL  ALIGALG+NS+VRCVL    R  + PE  A   AA GLKKR+L QIPVGVY
Subjt:  MDPNLPRRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVY

Query:  ------GSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGG
              G +   IKGTDCAICLGEF+ GDK+RMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   A   P  PP   S  +HVV++++ G
Subjt:  ------GSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGG

XP_022930638.1 RING-H2 finger protein ATL74-like [Cucurbita moschata]1.3e-104100Show/hide
Query:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC
        MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC
Subjt:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC

Query:  AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
        AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
Subjt:  AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN

XP_022971293.1 RING-H2 finger protein ATL74-like [Cucurbita maxima]1.0e-9694.79Show/hide
Query:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD
        MDPNLPRRLLATE V GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVN+LVRCVLSLGFRFR ERPEETAARLAAIGLKKRELSQIPVGVYGSD
Subjt:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD

Query:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
        CAKIKGTDCAICLGEFEVGDKVRMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRD  TVSP  PPP+GSASSHVVVVVEGGGN
Subjt:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN

XP_023540727.1 RING-H2 finger protein ATL74-like [Cucurbita pepo subsp. pepo]9.3e-9896.88Show/hide
Query:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD
        MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR ERPEETAARLAAIGLKKRELSQIPVGVYGSD
Subjt:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD

Query:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
        CAKIKGTDCAICLGEFEVGDKVRMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVS    PPQGSASSHVVVVVEGGGN
Subjt:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN

XP_041025774.1 RING-H2 finger protein ATL74-like [Juglans microcarpa x Juglans regia]5.2e-4859.46Show/hide
Query:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSDCA
        RRL+ TE    P  GN T +S  Y+ E N D +MV+ILAALL ALI ALG+NS+VRC      RF  E P++TAARLAA GLKKR+L QIPV +YGS   
Subjt:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSDCA

Query:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVV
         IK T+CAICLGEFE G+ VR+LP CNHGFHV CIDTWLLSHSSCPNCRHSL   P  G      VSP +P   G+     VV+V
Subjt:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVV

TrEMBL top hitse value%identityAlignment
A0A1R3JHP3 Zinc finger, RING-type9.6e-4859.68Show/hide
Query:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF-RERPEETAARLAAIGLKKRELSQIPVGVYGSDCA
        RRLL TE    PV GN T +S  Y+ E N D +MV+ILAALL ALI ALG+NS+VRC L    RF  E PE+ AARLAA GLKKREL QIPV VYG    
Subjt:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF-RERPEETAARLAAIGLKKRELSQIPVGVYGSDCA

Query:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVE
            T+C ICLGEF  G+KVR+LP CNHGFHVRCIDTWL+SHSSCPNCRHSLL      K + +  +  + PP+   S  VVVVV+
Subjt:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVE

A0A2I4E4V2 RING-H2 finger protein ATL74-like2.5e-4859.46Show/hide
Query:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSDCA
        RRL+ TE    P  GN   +S  Y+ E N D +MV+ILAALL ALI ALG+NS+VRC      RF  E P++TAARLAA GLKKR+L QIPV +YGS   
Subjt:  RRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSDCA

Query:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVV
         IK T+CAICLGEFE G+ VR+LP CNHGFHV CIDTWLLSHSSCPNCRHSL   PV G      VSP +P   G+     VV+V
Subjt:  KIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVV

A0A6J1DW47 RING-H2 finger protein ATL74-like3.6e-5563.32Show/hide
Query:  MDPNLPRRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVY
        M+ NL RRLLATE    P   N T +S+ YVGEMNLDA+MVVILAAL  ALIGALG+NS+VRCVL    R  + PE  A   AA GLKKR+L QIPVGVY
Subjt:  MDPNLPRRLLATE----PVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVY

Query:  ------GSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGG
              G +   IKGTDCAICLGEF+ GDK+RMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLL PP+K K   A   P  PP   S  +HVV++++ G
Subjt:  ------GSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGG

A0A6J1EVU3 RING-H2 finger protein ATL74-like6.5e-105100Show/hide
Query:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC
        MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC
Subjt:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDC

Query:  AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
        AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
Subjt:  AKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN

A0A6J1I6E6 RING-H2 finger protein ATL74-like5.0e-9794.79Show/hide
Query:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD
        MDPNLPRRLLATE V GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVN+LVRCVLSLGFRFR ERPEETAARLAAIGLKKRELSQIPVGVYGSD
Subjt:  MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFR-ERPEETAARLAAIGLKKRELSQIPVGVYGSD

Query:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN
        CAKIKGTDCAICLGEFEVGDKVRMLP CNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRD  TVSP  PPP+GSASSHVVVVVEGGGN
Subjt:  CAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN

SwissProt top hitse value%identityAlignment
Q6NQG7 RING-H2 finger protein ATL781.5e-2643.88Show/hide
Query:  TANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERP--EETAARLAAIGLKKRELSQIPVGVYGSDCAKIKG--TDCAICLGEF
        T   S YVG+ N DA++V++L+ LL AL+ +LG+NS++RC L            +    RL   G+K++ L       Y ++   + G  T+CAICL EF
Subjt:  TANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERP--EETAARLAAIGLKKRELSQIPVGVYGSDCAKIKG--TDCAICLGEF

Query:  EVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL
           ++V++LP C+HGFHVRCID WL SHSSCP CRH L+
Subjt:  EVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL

Q9FLC6 RING-H2 finger protein ATL731.6e-3650Show/hide
Query:  LPRRLLATEPVP------------GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF--RERPEETAARLAAIGLKKRELSQ
        + R LLAT+  P            G++ +N+       ++D HMV+ILAALL ALI ALG+NS++RCVL    RF   E P +T A +A  G+KKR L  
Subjt:  LPRRLLATEPVP------------GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF--RERPEETAARLAAIGLKKRELSQ

Query:  IPVGVYGSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL--LPPVKGKRDGATVS
        IPV  Y  +  K+K T+C ICLG+F  G+ VR+LP CNHGFHV+CIDTWLLSHSSCP CR SLL    P  G R G  V+
Subjt:  IPVGVYGSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL--LPPVKGKRDGATVS

Q9LM69 RING-H2 finger protein ATL802.7e-2342.68Show/hide
Query:  RLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV----LSLGFR----FRERPEETAARLAAIGLKKRELSQIPVGVYGSD
        RLL     P     NS+       L++ +VVILAALL ALI  LG+ ++ RCV    L+ G R     + +  +     A  GLKK+ L  +P   +  +
Subjt:  RLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV----LSLGFR----FRERPEETAARLAAIGLKKRELSQIPVGVYGSD

Query:  CAKI-KGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL
          +  K  +CAICL EF  GD++R+LP C HGFHV CIDTWL SHSSCP+CR  L++
Subjt:  CAKI-KGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL

Q9LZV8 RING-H2 finger protein ATL741.0e-3855.7Show/hide
Query:  RLLATEPVPGNTTANS---SYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAA--IGLKKRELSQIPVGVYGSDCAK
        RLL      GN T+ S     Y  +MN DA+MV+ILAALL ALI ALG+NS++RC +  GF         AA   A   GLKKREL + PV  YGS   K
Subjt:  RLLATEPVPGNTTANS---SYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAA--IGLKKRELSQIPVGVYGSDCAK

Query:  IKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKG
        I  T+CAICLGEF  G++VR+LP CNH FH+ CIDTWL+SHSSCPNCRHSL+   V G
Subjt:  IKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKG

Q9SG96 RING-H2 finger protein ATL723.3e-3752.17Show/hide
Query:  PGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAAR---------LAAIGLKKRELSQIPVGVYGSDCAKIKGT
        P N        + +   D +MV+ILAALL ALI AL +NS +RCVL +  RF    + + A           AA GLKK+ L QIPVG+YGS    +K T
Subjt:  PGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAAR---------LAAIGLKKRELSQIPVGVYGSDCAKIKGT

Query:  DCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL----PPVKGKRD
        +C ICLG+FE G+KVR+LP CNHGFHVRCIDTWLLS SSCP CR SLLL    P    +RD
Subjt:  DCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL----PPVKGKRD

Arabidopsis top hitse value%identityAlignment
AT1G20823.1 RING/U-box superfamily protein1.9e-2442.68Show/hide
Query:  RLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV----LSLGFR----FRERPEETAARLAAIGLKKRELSQIPVGVYGSD
        RLL     P     NS+       L++ +VVILAALL ALI  LG+ ++ RCV    L+ G R     + +  +     A  GLKK+ L  +P   +  +
Subjt:  RLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCV----LSLGFR----FRERPEETAARLAAIGLKKRELSQIPVGVYGSD

Query:  CAKI-KGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL
          +  K  +CAICL EF  GD++R+LP C HGFHV CIDTWL SHSSCP+CR  L++
Subjt:  CAKI-KGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL

AT1G49230.1 RING/U-box superfamily protein1.1e-2743.88Show/hide
Query:  TANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERP--EETAARLAAIGLKKRELSQIPVGVYGSDCAKIKG--TDCAICLGEF
        T   S YVG+ N DA++V++L+ LL AL+ +LG+NS++RC L            +    RL   G+K++ L       Y ++   + G  T+CAICL EF
Subjt:  TANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERP--EETAARLAAIGLKKRELSQIPVGVYGSDCAKIKG--TDCAICLGEF

Query:  EVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL
           ++V++LP C+HGFHVRCID WL SHSSCP CRH L+
Subjt:  EVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL

AT3G10910.1 RING/U-box superfamily protein2.3e-3852.17Show/hide
Query:  PGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAAR---------LAAIGLKKRELSQIPVGVYGSDCAKIKGT
        P N        + +   D +MV+ILAALL ALI AL +NS +RCVL +  RF    + + A           AA GLKK+ L QIPVG+YGS    +K T
Subjt:  PGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAAR---------LAAIGLKKRELSQIPVGVYGSDCAKIKGT

Query:  DCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL----PPVKGKRD
        +C ICLG+FE G+KVR+LP CNHGFHVRCIDTWLLS SSCP CR SLLL    P    +RD
Subjt:  DCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLL----PPVKGKRD

AT5G01880.1 RING/U-box superfamily protein7.2e-4055.7Show/hide
Query:  RLLATEPVPGNTTANS---SYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAA--IGLKKRELSQIPVGVYGSDCAK
        RLL      GN T+ S     Y  +MN DA+MV+ILAALL ALI ALG+NS++RC +  GF         AA   A   GLKKREL + PV  YGS   K
Subjt:  RLLATEPVPGNTTANS---SYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAA--IGLKKRELSQIPVGVYGSDCAK

Query:  IKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKG
        I  T+CAICLGEF  G++VR+LP CNH FH+ CIDTWL+SHSSCPNCRHSL+   V G
Subjt:  IKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKG

AT5G05280.1 RING/U-box superfamily protein1.2e-3750Show/hide
Query:  LPRRLLATEPVP------------GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF--RERPEETAARLAAIGLKKRELSQ
        + R LLAT+  P            G++ +N+       ++D HMV+ILAALL ALI ALG+NS++RCVL    RF   E P +T A +A  G+KKR L  
Subjt:  LPRRLLATEPVP------------GNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRF--RERPEETAARLAAIGLKKRELSQ

Query:  IPVGVYGSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL--LPPVKGKRDGATVS
        IPV  Y  +  K+K T+C ICLG+F  G+ VR+LP CNHGFHV+CIDTWLLSHSSCP CR SLL    P  G R G  V+
Subjt:  IPVGVYGSDCAKIKGTDCAICLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLL--LPPVKGKRDGATVS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACCCAAATTTGCCACGCCGGCTTCTGGCCACCGAGCCAGTGCCGGGGAACACCACGGCTAATTCCTCGTATTATGTCGGGGAGATGAACCTCGACGCTCACATGGT
GGTGATTCTGGCGGCGCTCTTATTTGCACTAATTGGAGCTCTTGGTGTTAACTCTCTTGTACGCTGCGTTTTGAGCCTCGGCTTCCGGTTTCGGGAGAGGCCGGAGGAGA
CGGCGGCGCGTTTGGCGGCGATTGGGCTTAAGAAGCGAGAACTTAGTCAGATTCCGGTTGGGGTTTATGGAAGTGATTGTGCGAAAATTAAGGGTACGGATTGCGCGATT
TGCCTTGGGGAGTTTGAAGTGGGCGACAAGGTTAGAATGTTGCCTAATTGTAACCATGGATTCCACGTCAGATGTATTGACACGTGGCTGTTATCTCACTCCTCTTGCCC
CAACTGTCGTCATTCGTTGCTGCTGCCACCGGTTAAAGGGAAACGAGACGGCGCTACTGTTTCGCCGCCGCAACCGCCGCCGCAGGGCTCTGCTTCAAGCCACGTCGTTG
TGGTCGTAGAGGGTGGTGGCAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGACCCAAATTTGCCACGCCGGCTTCTGGCCACCGAGCCAGTGCCGGGGAACACCACGGCTAATTCCTCGTATTATGTCGGGGAGATGAACCTCGACGCTCACATGGT
GGTGATTCTGGCGGCGCTCTTATTTGCACTAATTGGAGCTCTTGGTGTTAACTCTCTTGTACGCTGCGTTTTGAGCCTCGGCTTCCGGTTTCGGGAGAGGCCGGAGGAGA
CGGCGGCGCGTTTGGCGGCGATTGGGCTTAAGAAGCGAGAACTTAGTCAGATTCCGGTTGGGGTTTATGGAAGTGATTGTGCGAAAATTAAGGGTACGGATTGCGCGATT
TGCCTTGGGGAGTTTGAAGTGGGCGACAAGGTTAGAATGTTGCCTAATTGTAACCATGGATTCCACGTCAGATGTATTGACACGTGGCTGTTATCTCACTCCTCTTGCCC
CAACTGTCGTCATTCGTTGCTGCTGCCACCGGTTAAAGGGAAACGAGACGGCGCTACTGTTTCGCCGCCGCAACCGCCGCCGCAGGGCTCTGCTTCAAGCCACGTCGTTG
TGGTCGTAGAGGGTGGTGGCAATTAG
Protein sequenceShow/hide protein sequence
MDPNLPRRLLATEPVPGNTTANSSYYVGEMNLDAHMVVILAALLFALIGALGVNSLVRCVLSLGFRFRERPEETAARLAAIGLKKRELSQIPVGVYGSDCAKIKGTDCAI
CLGEFEVGDKVRMLPNCNHGFHVRCIDTWLLSHSSCPNCRHSLLLPPVKGKRDGATVSPPQPPPQGSASSHVVVVVEGGGN