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Carg01149 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01149
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionvacuolar-sorting receptor 1
Genome locationCarg_Chr06:976577..977791
RNA-Seq ExpressionCarg01149
SyntenyCarg01149
Gene Ontology termsGO:0005794 - Golgi apparatus (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0005509 - calcium ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596303.1 putative LRR receptor-like serine/threonine-protein kinase IRK, partial [Cucurbita argyrosperma subsp. sororia]1.1e-5077.7Show/hide
Query:  MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMM-RGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFG
        MDHPSFQELVIFSKIITSLRVPYGSSLLSAP              CDL+    +PS  L +  L  +S    FVVEKNSLKVTYPDSIKGVYECAIGNFG
Subjt:  MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMM-RGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFG

Query:  VPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        VPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  VPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

KAG7027855.1 Vacuolar-sorting receptor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-79100Show/hide
Query:  MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGV
        MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGV
Subjt:  MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGV

Query:  PEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRGG
        PEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRGG
Subjt:  PEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRGG

XP_022941643.1 vacuolar-sorting receptor 1 [Cucurbita moschata]1.5e-5098.99Show/hide
Query:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MM+GKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

XP_022971209.1 vacuolar-sorting receptor 1-like [Cucurbita maxima]2.5e-50100Show/hide
Query:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

XP_023539129.1 vacuolar-sorting receptor 1-like [Cucurbita pepo subsp. pepo]6.6e-51100Show/hide
Query:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

TrEMBL top hitse value%identityAlignment
A0A5A7TLM3 Vacuolar-sorting receptor 11.7e-4488.78Show/hide
Query:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        M G+P +FL VCF+L VSC GRFVVEKNSLK+T PDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDD GISFKSKPGSLPTFVLADRG
Subjt:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

A0A5D3DN06 Vacuolar-sorting receptor 11.7e-4488.78Show/hide
Query:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        M G+P +FL VCF+L VSC GRFVVEKNSLK+T PDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDD GISFKSKPGSLPTFVLADRG
Subjt:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

A0A6J1FSP2 vacuolar-sorting receptor 17.2e-5198.99Show/hide
Query:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MM+GKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

A0A6J1I7X2 vacuolar-sorting receptor 1-like1.2e-50100Show/hide
Query:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

O48662 PV721.2e-50100Show/hide
Query:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
Subjt:  MRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

SwissProt top hitse value%identityAlignment
O22925 Vacuolar-sorting receptor 21.8e-3072.84Show/hide
Query:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        SC GRFVVEKN+L+VT P+SI+GVYECA+GNFGVP+YGG+M+G V YPK NQKACK+FDD  ISF+S+   LPTFVL DRG
Subjt:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

O80977 Vacuolar-sorting receptor 34.1e-2770.13Show/hide
Query:  RFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        RFVVEKNSL VT P+SIKG ++ AIGNFG+P+YGG+M G V YPK NQK+CK F D  ISFKS+PG+LPTF+L DRG
Subjt:  RFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

P93026 Vacuolar-sorting receptor 12.5e-3273.33Show/hide
Query:  SVCFLLCVS-CFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        ++ FLL ++   GRFVVEKN+LKVT PDSIKG+YECAIGNFGVP+YGGT+ G V YPK+NQKACKS+ D  ISFKSKPG LPTFVL DRG
Subjt:  SVCFLLCVS-CFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

P93484 Vacuolar-sorting receptor 14.7e-2358.06Show/hide
Query:  SVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        S  L + F+L      RFVVEKNSL VT P+ IKG ++ AIGNFG+P+YGG+M G V YPK N K CK FD    SFKS+PG+LPT +L DRG
Subjt:  SVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

Q56ZQ3 Vacuolar-sorting receptor 44.1e-2767.44Show/hide
Query:  LCVSCF--GRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        L VS F   RFVVEKNSL VT P+SIKG ++ AIGNFG+P+YGG+M G V YPK NQK+CK F D  ISFKS+PG+LPTF+L DRG
Subjt:  LCVSCF--GRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

Arabidopsis top hitse value%identityAlignment
AT2G14720.1 vacuolar sorting receptor 42.9e-2867.44Show/hide
Query:  LCVSCF--GRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        L VS F   RFVVEKNSL VT P+SIKG ++ AIGNFG+P+YGG+M G V YPK NQK+CK F D  ISFKS+PG+LPTF+L DRG
Subjt:  LCVSCF--GRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

AT2G14740.1 vaculolar sorting receptor 32.9e-2870.13Show/hide
Query:  RFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        RFVVEKNSL VT P+SIKG ++ AIGNFG+P+YGG+M G V YPK NQK+CK F D  ISFKS+PG+LPTF+L DRG
Subjt:  RFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

AT2G30290.1 VACUOLAR SORTING RECEPTOR 21.3e-3172.84Show/hide
Query:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        SC GRFVVEKN+L+VT P+SI+GVYECA+GNFGVP+YGG+M+G V YPK NQKACK+FDD  ISF+S+   LPTFVL DRG
Subjt:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

AT2G30290.2 VACUOLAR SORTING RECEPTOR 21.3e-3172.84Show/hide
Query:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        SC GRFVVEKN+L+VT P+SI+GVYECA+GNFGVP+YGG+M+G V YPK NQKACK+FDD  ISF+S+   LPTFVL DRG
Subjt:  SCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG

AT3G52850.1 vacuolar sorting receptor homolog 11.8e-3373.33Show/hide
Query:  SVCFLLCVS-CFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG
        ++ FLL ++   GRFVVEKN+LKVT PDSIKG+YECAIGNFGVP+YGGT+ G V YPK+NQKACKS+ D  ISFKSKPG LPTFVL DRG
Subjt:  SVCFLLCVS-CFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGIVHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCATCCCTCCTTTCAAGAGCTTGTGATCTTCTCAAAGATCATTACGAGCCTTCGAGTGCCCTATGGATCCTCCCTCCTATCAGCACCTTCTTCATCGGCGAAGTT
CACTCAATATTCACCCATTTTCTTCTGCGATCTAATGATGAGGGGAAAACCAAGTGTTTTTCTCTCCGTTTGTTTCCTTCTTTGCGTCTCTTGTTTCGGTAGATTCGTTG
TCGAGAAGAACAGCTTGAAGGTAACATACCCAGATTCTATCAAGGGTGTTTATGAATGTGCGATTGGGAATTTTGGGGTTCCTGAATATGGAGGCACCATGACTGGCATC
GTGCATTATCCTAAAGCTAATCAGAAGGCGTGCAAGAGCTTTGATGATGTCGGTATCTCTTTCAAGTCCAAACCTGGAAGTCTCCCTACTTTCGTTCTCGCCGATCGAGG
AGGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCATCCCTCCTTTCAAGAGCTTGTGATCTTCTCAAAGATCATTACGAGCCTTCGAGTGCCCTATGGATCCTCCCTCCTATCAGCACCTTCTTCATCGGCGAAGTT
CACTCAATATTCACCCATTTTCTTCTGCGATCTAATGATGAGGGGAAAACCAAGTGTTTTTCTCTCCGTTTGTTTCCTTCTTTGCGTCTCTTGTTTCGGTAGATTCGTTG
TCGAGAAGAACAGCTTGAAGGTAACATACCCAGATTCTATCAAGGGTGTTTATGAATGTGCGATTGGGAATTTTGGGGTTCCTGAATATGGAGGCACCATGACTGGCATC
GTGCATTATCCTAAAGCTAATCAGAAGGCGTGCAAGAGCTTTGATGATGTCGGTATCTCTTTCAAGTCCAAACCTGGAAGTCTCCCTACTTTCGTTCTCGCCGATCGAGG
AGGTTAA
Protein sequenceShow/hide protein sequence
MDHPSFQELVIFSKIITSLRVPYGSSLLSAPSSSAKFTQYSPIFFCDLMMRGKPSVFLSVCFLLCVSCFGRFVVEKNSLKVTYPDSIKGVYECAIGNFGVPEYGGTMTGI
VHYPKANQKACKSFDDVGISFKSKPGSLPTFVLADRGG