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Carg01207 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01207
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description3-dehydroquinate synthase
Genome locationCarg_Chr06:677257..679398
RNA-Seq ExpressionCarg01207
SyntenyCarg01207
Gene Ontology termsNA
InterPro domainsIPR030960 - 3-dehydroquinate synthase domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052950.1 3-dehydroquinate synthase [Cucumis melo var. makuwa]1.1e-3737.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + DTV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

KAG2696477.1 hypothetical protein I3760_07G060900 [Carya illinoinensis]2.2e-3840.88Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + +TV PLY+DKV EALT GNPNVSVESV+LPDGEKYK M                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCV+VDTDTL  LPD ELASG AEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  -------------------------------DDKKVANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKS
                                        DKKVA+GLLRLILLKGPL NCVFTGDYDRK LD+TL +FCKS
Subjt:  -------------------------------DDKKVANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKS

KAG7027797.1 3-dehydroquinate synthase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-76100Show/hide
Query:  MWTESRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDMVDSSVGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEVDDKKV
        MWTESRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDMVDSSVGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEVDDKKV
Subjt:  MWTESRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDMVDSSVGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEVDDKKV

Query:  ANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKSQVLIKI
        ANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKSQVLIKI
Subjt:  ANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKSQVLIKI

XP_004146151.1 3-dehydroquinate synthase, chloroplastic [Cucumis sativus]3.1e-3737.23Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + +TV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

XP_008448531.1 PREDICTED: 3-dehydroquinate synthase, chloroplastic [Cucumis melo]1.1e-3737.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + DTV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

TrEMBL top hitse value%identityAlignment
A0A0A0L1L7 DHQ_synthase domain-containing protein1.5e-3737.23Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + +TV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

A0A1S3BJA4 3-dehydroquinate synthase, chloroplastic5.2e-3837.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + DTV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

A0A5D3CLW2 3-dehydroquinate synthase5.2e-3837.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + DTV PLY+DKVTEALTIGNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TLRSFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

A0A5P1EIR1 DHQ_synthase domain-containing protein2.2e-3637.12Show/hide
Query:  TVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSSVGG
        TV PLY++KVTEALT GNPNVSVESV+LPDGE+YK+M                                                        VDSSVGG
Subjt:  TVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSSVGG

Query:  KTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV--------------------------------------------------------
        KTGINHPLGKNLIGAFYQPQCV++DTDTL  LPD ELASG AEV                                                        
Subjt:  KTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV--------------------------------------------------------

Query:  --------------------------------------------------------DDKKVANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKS
                                                                 DKKVA+GLLRLILLKGPL +CVFTGDYD+KALD+TLR+FCKS
Subjt:  --------------------------------------------------------DDKKVANGLLRLILLKGPLKNCVFTGDYDRKALDDTLRSFCKS

A0A6J1CVW3 3-dehydroquinate synthase, chloroplastic3.4e-3736.62Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + DTV PLY+DKVTEALT+GNPNVSVESVVLPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCVVVDTDTL  LPD ELASGFAEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NC+FTGDYDRKALD+TL SFCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

SwissProt top hitse value%identityAlignment
B8GPV3 3-dehydroquinate synthase8.0e-2039.46Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + +TV PLY+D++   L     +  VE+V+LPDGE+YK M                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV
        VGGKTG+NHPLGKN+IGAF+QP+CVV+DTDTL  LPD EL +G AEV
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV

Q31DP9 3-dehydroquinate synthase2.0e-1837.41Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        S  TV PLY++K  +A +       V++V+LPDGE+YK++                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV
        VGGKTG+NHP GKN+IGAF+QP+CVV+DTDTL  L D EL++G AEV
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV

Q8RU74 3-dehydroquinate synthase, chloroplastic3.5e-3132.3Show/hide
Query:  TVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSSVGG
        TV PLY+DK   ALT GNPNV+VESV+LPDGE++K+M                                                        VDSSVGG
Subjt:  TVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSSVGG

Query:  KTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV--------------------------------------------------------
        KTGINHPLGKN+IGAFYQPQCV++DTDTL  LPD ELASG AEV                                                        
Subjt:  KTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV--------------------------------------------------------

Query:  -------------------------------------------------------------------------------DDKKVANGLLRLILLKGPLKN
                                                                                        DKKVA+G LRLILLKG L N
Subjt:  -------------------------------------------------------------------------------DDKKVANGLLRLILLKGPLKN

Query:  CVFTGDYDRKALDDTLRSFCKS
        CVFTGDYD+KALD+TLR+F KS
Subjt:  CVFTGDYDRKALDDTLRSFCKS

Q8VYV7 3-dehydroquinate synthase, chloroplastic2.2e-3333.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + D V PLY+DK  +ALT GNPNV+VESV+LPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCV+VDTDTL  LPD E+ASG AEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDR+ALD TLR+F KS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

U3KRF2 3-dehydroquinate synthase, chloroplastic1.1e-3433.85Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        +  TV P+Y+DKV  ALT GNPNVSVESV+LPDGEKYK+M                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCV++DTDTL  LPD ELASG AEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDRKALD+TL +FCKS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

Arabidopsis top hitse value%identityAlignment
AT5G66120.1 3-dehydroquinate synthase, putative1.5e-3433.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + D V PLY+DK  +ALT GNPNV+VESV+LPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCV+VDTDTL  LPD E+ASG AEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDR+ALD TLR+F KS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS

AT5G66120.2 3-dehydroquinate synthase, putative1.5e-3433.54Show/hide
Query:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS
        + D V PLY+DK  +ALT GNPNV+VESV+LPDGEKYKDM                                                        VDSS
Subjt:  SRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDM--------------------------------------------------------VDSS

Query:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------
        VGGKTGINH LGKNLIGAFYQPQCV+VDTDTL  LPD E+ASG AEV                                                     
Subjt:  VGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEV-----------------------------------------------------

Query:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP
                                                                                           DKKVA+GLLRLILLKGP
Subjt:  ----------------------------------------------------------------------------------DDKKVANGLLRLILLKGP

Query:  LKNCVFTGDYDRKALDDTLRSFCKS
        L NCVFTGDYDR+ALD TLR+F KS
Subjt:  LKNCVFTGDYDRKALDDTLRSFCKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACAGAATCACGAGATACTGTTGAACCATTGTATGTAGATAAAGTTACTGAAGCTCTAACCATTGGGAATCCGAATGTTTCAGTTGAAAGTGTAGTTTTACCAGA
TGGTGAAAAGTACAAAGATATGGTGGACTCTTCTGTTGGGGGAAAGACAGGGATAAATCATCCTCTGGGGAAGAACTTGATTGGCGCATTTTACCAGCCTCAATGTGTTG
TTGTAGACACTGATACACTATATGCCCTGCCTGATAGCGAGCTAGCTTCTGGGTTTGCAGAGGTCGACGACAAGAAGGTTGCTAACGGGCTACTAAGGTTAATTCTCTTG
AAAGGTCCTCTAAAAAACTGCGTGTTCACCGGCGATTATGATCGGAAGGCGTTAGACGACACGCTTCGTTCGTTTTGCAAGTCTCAAGTCTTAATCAAGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGACAGAATCACGAGATACTGTTGAACCATTGTATGTAGATAAAGTTACTGAAGCTCTAACCATTGGGAATCCGAATGTTTCAGTTGAAAGTGTAGTTTTACCAGA
TGGTGAAAAGTACAAAGATATGGTGGACTCTTCTGTTGGGGGAAAGACAGGGATAAATCATCCTCTGGGGAAGAACTTGATTGGCGCATTTTACCAGCCTCAATGTGTTG
TTGTAGACACTGATACACTATATGCCCTGCCTGATAGCGAGCTAGCTTCTGGGTTTGCAGAGGTCGACGACAAGAAGGTTGCTAACGGGCTACTAAGGTTAATTCTCTTG
AAAGGTCCTCTAAAAAACTGCGTGTTCACCGGCGATTATGATCGGAAGGCGTTAGACGACACGCTTCGTTCGTTTTGCAAGTCTCAAGTCTTAATCAAGATTTAG
Protein sequenceShow/hide protein sequence
MWTESRDTVEPLYVDKVTEALTIGNPNVSVESVVLPDGEKYKDMVDSSVGGKTGINHPLGKNLIGAFYQPQCVVVDTDTLYALPDSELASGFAEVDDKKVANGLLRLILL
KGPLKNCVFTGDYDRKALDDTLRSFCKSQVLIKI