CuGenDBv2

Gene ID	Carg01222
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	Growth-regulating factor
Genome location	Carg_Chr06:604898..606470
RNA-Seq Expression	Carg01222
Synteny	Carg01222
Gene Ontology terms	GO:0006351 - transcription, DNA-templated (biological process) GO:0032502 - developmental process (biological process) GO:0005634 - nucleus (cellular component) GO:0005524 - ATP binding (molecular function)
InterPro domains	IPR014977 - WRC domain IPR031137 - Growth-regulating factor

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG7027782.1 hypothetical protein SDJN02_08959, partial [Cucurbita argyrosperma subsp. argyrosperma]

2.3e-107

100

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Query:  MGCMERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQ
        MGCMERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQ
Subjt:  MGCMERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQ

Query:  QTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGVAVAPPPPLPPTRPDDNIDGK
        QTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGVAVAPPPPLPPTRPDDNIDGK
Subjt:  QTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGVAVAPPPPLPPTRPDDNIDGK

Query:  KL
        KL
Subjt:  KL

XP_022930465.1 uncharacterized protein LOC111436877 isoform X1 [Cucurbita moschata]

4.3e-101

97.99

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPD V A+APPPPLPPT PDDNIDGKKL
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

XP_022930542.1 uncharacterized protein LOC111436877 isoform X2 [Cucurbita moschata]

4.3e-101

97.99

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPD V A+APPPPLPPT PDDNIDGKKL
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

XP_023521667.1 uncharacterized protein LOC111785505 [Cucurbita pepo subsp. pepo]

3.3e-101

97.99

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFDAETSNGV+PQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        GYSLCEHHLGKGRLRSMNSVRSRSS ATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV AVAPPPPLPPT PDDNIDGKKL
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

XP_023546328.1 uncharacterized protein LOC111805453 [Cucurbita pepo subsp. pepo]

6.6e-102

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Query:  MERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTL
        +ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTL
Subjt:  MERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTL

Query:  VGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        VGYSLCEHHLGKGRLRSMNSVRSRSS ATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV AVAPPPPLPPT PDDNIDGKKL
Subjt:  VGYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EQU2 Growth-regulating factor

2.1e-101

97.99

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPD V A+APPPPLPPT PDDNIDGKKL
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

A0A6J1EWY8 Growth-regulating factor

2.1e-101

97.99

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL
        GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPD V A+APPPPLPPT PDDNIDGKKL
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGV-AVAPPPPLPPTRPDDNIDGKKL

A0A6J1F795 Growth-regulating factor

2.4e-57

60.79

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Query:  ERCEFDAETSNGVVPQSTSSPQV-VGRWGEREREFPLKKRR------SDDHNNNGNKK----------------MKKKQEEHQSKMGLNLAGKRKSRGGA
        E   F AE SNGV+P S+SSPQV  G+W ER+++FPLKKRR      SDD  NN + +                 K  + + Q K+GLNLAGK++SRGGA
Subjt:  ERCEFDAETSNGVVPQSTSSPQV-VGRWGEREREFPLKKRR------SDDHNNNGNKK----------------MKKKQEEHQSKMGLNLAGKRKSRGGA

Query:  LMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA--------TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSL
        LMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMN+VRSRS AA          V+K++ K P   P P P LTL SKKRTKLG+VKARSISSL
Subjt:  LMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAA--------TVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSL

Query:  LGQPDGVAVAPPPPLP--PTRPDDNID
        LGQPDG+A  PPPP P   T P+DNI+
Subjt:  LGQPDGVAVAPPPPLP--PTRPDDNID

A0A6J1I3R9 Growth-regulating factor

2.3e-84

94.8

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFD+ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP
        GYSLCEHHLGKGRLRSMNSVRSRS A TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP

A0A6J1I679 Growth-regulating factor

2.3e-84

94.8

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Query:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
        ERCEFD+ETSNGVVPQSTSSPQVVGRWGE E+EFPLKKRRSDDHNNNGNKKMKKKQEEHQSK+GLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV
Subjt:  ERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLV

Query:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP
        GYSLCEHHLGKGRLRSMNSVRSRS A TVVEKEDNKKPS SPSPRPPLTLTSKKRT LGVVKARSISSLLG P
Subjt:  GYSLCEHHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQP

SwissProt top hits

e value

%identity

Alignment

Q6AWY1 Growth-regulating factor 8

2.3e-04

36.84

Show/hide

Query:  GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVE
        G A +E  RC R +G+ WRC +  +     CE H+ +GR RS   V  R +  T+ E
Subjt:  GGALMEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSVRSRSSAATVVE

Arabidopsis top hits

e value

%identity

Alignment

AT2G42040.1 CONTAINS InterPro DOMAIN/s: WRC (InterPro:IPR014977); Has 219 Blast hits to 219 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 215; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

5.7e-27

48.88

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Query:  DAETSNGVVP--QSTSSPQVVGRWGEREREFPLKKRRS----DDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSR--GGALMEGSRCSRVNGRGWRCCQQ
        DA  S  V P  +S SS QVV +    E+   L+KRR     +D+ +       ++ EE     G    GK+K++  GG L EGSRCSRVNGRGWRCCQQ
Subjt:  DAETSNGVVP--QSTSSPQVVGRWGEREREFPLKKRRS----DDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSR--GGALMEGSRCSRVNGRGWRCCQQ

Query:  TLVGYSLCEHHLGKGRLRSMNSV---RSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQ
        TLVGYSLCEHHLGKGR+RSMN     R     A VVE                     KKR KLG+VKARSISSLLGQ
Subjt:  TLVGYSLCEHHLGKGRLRSMNSV---RSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQ

AT5G53660.1 growth-regulating factor 7

4.0e-04

32.31

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Query:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV-----RSRSSAATVVEKEDNKKP
        +E  RC R +G+ WRC ++ +  +  CE HL +GR RS   V     R  ++  +V  ++  K P
Subjt:  MEGSRCSRVNGRGWRCCQQTLVGYSLCEHHLGKGRLRSMNSV-----RSRSSAATVVEKEDNKKP

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGGCTGCATGGAGAGGTGCGAGTTTGATGCGGAAACTAGCAATGGGGTTGTTCCACAATCCACCTCTTCACCTCAAGTGGTGGGGCGGTGGGGCGAAAGGGAGAGGGA
ATTTCCATTAAAGAAGAGAAGAAGTGATGATCACAACAACAATGGAAACAAGAAGATGAAGAAGAAACAAGAAGAACACCAATCCAAAATGGGTCTCAACCTCGCCGGAA
AAAGGAAATCGAGAGGCGGCGCTTTAATGGAGGGATCTCGGTGCAGCCGCGTCAATGGAAGAGGGTGGCGCTGCTGCCAACAGACCCTCGTTGGTTACTCTCTCTGTGAA
CATCACTTGGGAAAAGGTCGCCTCCGCAGCATGAACAGCGTCCGCAGCCGATCCTCGGCCGCCACCGTCGTCGAGAAAGAAGACAACAAGAAGCCTTCTCCATCACCATC
TCCACGCCCACCATTGACACTGACTAGTAAGAAAAGAACGAAGCTCGGTGTAGTGAAAGCAAGGTCGATAAGCAGCCTGCTCGGCCAACCCGATGGCGTGGCGGTGGCAC
CACCTCCGCCTCTACCTCCTACACGGCCGGATGACAACATTGACGGTAAAAAATTATAA

mRNA sequence

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Protein sequence

Show/hide protein sequence

MGCMERCEFDAETSNGVVPQSTSSPQVVGRWGEREREFPLKKRRSDDHNNNGNKKMKKKQEEHQSKMGLNLAGKRKSRGGALMEGSRCSRVNGRGWRCCQQTLVGYSLCE
HHLGKGRLRSMNSVRSRSSAATVVEKEDNKKPSPSPSPRPPLTLTSKKRTKLGVVKARSISSLLGQPDGVAVAPPPPLPPTRPDDNIDGKKL

Carg01222 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome