; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg01246 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01246
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionDNA-directed RNA polymerase subunit
Genome locationCarg_Chr06:420972..424611
RNA-Seq ExpressionCarg01246
SyntenyCarg01246
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0005736 - RNA polymerase I complex (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR007081 - RNA polymerase Rpb1, domain 5
IPR015699 - DNA-directed RNA pol I, largest subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6596219.1 DNA-directed RNA polymerase I subunit 1, partial [Cucurbita argyrosperma subsp. sororia]0.0e+0099.16Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
        RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLT   Q
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

KAG7027759.1 DNA-directed RNA polymerase I subunit 1, partial [Cucurbita argyrosperma subsp. argyrosperma]0.0e+00100Show/hide
Query:  MIRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNT
        MIRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNT
Subjt:  MIRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNT

Query:  FHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHA
        FHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHA
Subjt:  FHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHA

Query:  HVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSE
        HVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSE
Subjt:  HVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSE

Query:  EELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI
        EELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI
Subjt:  EELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI

Query:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET
        LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET
Subjt:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET

Query:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
        IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
Subjt:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

Query:  DV
        DV
Subjt:  DV

XP_022938891.1 DNA-directed RNA polymerase I subunit 1 [Cucurbita moschata]0.0e+0098.99Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS AKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSS+REENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
         SAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGND KVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

XP_022971295.1 DNA-directed RNA polymerase I subunit 1 [Cucurbita maxima]0.0e+0098.82Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS AKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSS+REENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
         SAGFESEVDQGDEADITNDDTMEIVKDATSEDQT IIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFV+AKGNHFEVHFKFTNEPHILLTQIAQ
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

XP_023538901.1 DNA-directed RNA polymerase I subunit 1 [Cucurbita pepo subsp. pepo]0.0e+0098.66Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS AKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSS+REENDDDD+VGNDLDVAEDLGFDMKKQKLRT DEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
         SAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFV+AKGNHFEVHFKFTNEPHILLTQIAQ
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

TrEMBL top hitse value%identityAlignment
A0A0A0LF53 DNA-directed RNA polymerase subunit4.4e-27281.03Show/hide
Query:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
        I  +  L  N +M+Y+ SHHQ   +N +INELPS L+EK E IYNSL+KDK PGL  K+DFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
Subjt:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF

Query:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH
        HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL+EGYSMD AK LANKLKKITVADIIESM VTVVPFSQRKREICSIYKL I FYPLE+N QH H
Subjt:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH

Query:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEE
        +S EDLE  LE VF+ ELE  I+ EM+LLS+I+GIKNFVPDSQSKG SE D+VSSS +EENDDDDD GNDLDVAEDLG DMKKQKL+  DEMDYEDDSE+
Subjt:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEE

Query:  ELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHIL
        +LN KE S GFESEVDQGDEA+ITN+D +EIVKD+ SE+Q EI+DVSKS SK KTT+TS +KKK KSE  RK+ DR+IFV AK NHFEVHFKFTNEPH L
Subjt:  ELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHIL

Query:  LTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETI
        L+QI QR AQKVSIQ SGKII+CQQITCKEGQVIYHGN++K RKN+KPEEKEK+PALQT+GVDFKTLWE+QDELD RYIYSNDIHAMLQTYGVEAAR TI
Subjt:  LTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETI

Query:  IREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID
        IREI+NIF+SYGISVNIRHL+L+ADYMTHSGGYRPM+RLGGI+DSISPFSRMTFETA +FIVQAA HGEVD LETPS+RICLGLPVKMGTGSFDLMQKI+
Subjt:  IREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID

Query:  V
        V
Subjt:  V

A0A5A7TQ71 DNA-directed RNA polymerase subunit4.1e-27080.73Show/hide
Query:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
        I  +  L  N +M+YQKSHHQ   +N +INELPS L+EKAE IYNSL+KDK PGL  K+DFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
Subjt:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF

Query:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH
        HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL+EGYSMD AK LANKLKKITVADIIESM VTVVPFSQRK EICSIYKL I FYPL++N QH H
Subjt:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH

Query:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREE-NDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSE
        +S EDLE  LE VF+ ELE  I+ EM+LLS+I+GIKNFVPDSQSK  SE D+VS S++EE +DDDDD+GNDLDVAEDLG DMKKQKL+ TDEMDYEDDSE
Subjt:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREE-NDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSE

Query:  EELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI
        ++LN KE S GFESEVDQGDEA+ITN++ +EIVKD+ SE++ EI+D+SKS SK KTT+TS KKKK KSEF+RKD DR+IF  AK NHFEVHFKFTNEPHI
Subjt:  EELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI

Query:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET
        LL+QIAQR AQKVSIQ SGKII+CQQITCKEGQVIYHGN++K RKN+KPEEKEK+PALQT+GVDFKTLWE+QDELD RYIYSNDIHAMLQTYGVEAAR T
Subjt:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET

Query:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
        IIREI+NIF+SYGISVNIRHL+L+ADYMTHSGGYRPM+RLGGI+DSISPFSRMTFETA +FIVQAA HGEVD LETPS+RICLGLPVKMGTGSFDLMQ+I
Subjt:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

Query:  DV
        +V
Subjt:  DV

A0A6J1DJ24 DNA-directed RNA polymerase subunit2.5e-29185.88Show/hide
Query:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
        I  +  L  N +M+YQKSHHQ   +N YINELPS LQEKAEVIYNS +KDKAPGL QKDDF RLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF
Subjt:  IRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTF

Query:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH
        HHAGRGEMNVTLGIPRLQEILMTAS DIKTPIMTCPLR+GYSMD AKCLANKLKKITVADIIESMEVTVVPFS RKREICSIYKLEI+FYPLE+NPQH H
Subjt:  HHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAH

Query:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEE
        VSSEDLEEILEFVFVRELEDSIQNEM+LLSRI+GIKNFVPDSQS+G SE D+VSSS+ EENDDDD+VGND+D AEDLGFDMKKQKLR TDEMDYEDDS+E
Subjt:  VSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEE

Query:  ELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI
        ELN K  SAGFESEVDQGDE +ITNDD M+I KD+TSE+QTEI DVSKSN KGKT KT+NKKKK AK EFSRKDYDRAIFV+AKGNHFEVHFKF NEPHI
Subjt:  ELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKK-AKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHI

Query:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET
        LLTQ+AQ+TAQKVSIQSSGKIIRCQQITCKEGQVIYHGN++K RK +K EEKEK+PA+QTTGVDF+ LWELQDELD RYIYSNDIHAML+TYGVEAARET
Subjt:  LLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARET

Query:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
        ++REI+NIFSSYGISVNIRHLTL+ADYMTHSGGYRPM+RLGGIA+SISPFSRMTFETA++FIVQAA+HGE+D LETPSARICLGLP KMGTGSFDLMQKI
Subjt:  IIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

Query:  DV
        +V
Subjt:  DV

A0A6J1FEE5 DNA-directed RNA polymerase subunit0.0e+0098.99Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS AKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSS+REENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
         SAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGND KVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

A0A6J1I5C4 DNA-directed RNA polymerase subunit0.0e+0098.82Show/hide
Query:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
        L  NCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNS AKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG
Subjt:  LFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRG

Query:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
        EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL
Subjt:  EMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDL

Query:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
        EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSS+REENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE
Subjt:  EEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKE

Query:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ
         SAGFESEVDQGDEADITNDDTMEIVKDATSEDQT IIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFV+AKGNHFEVHFKFTNEPHILLTQIAQ
Subjt:  RSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQ

Query:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
        RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN
Subjt:  RTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRN

Query:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
        IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV
Subjt:  IFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV

SwissProt top hitse value%identityAlignment
O35134 DNA-directed RNA polymerase I subunit RPA13.9e-6834.13Show/hide
Query:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLRE-GYSMDDAKCLANKLKKITVADII
        LL+ K+  SL  PGE VG+LAAQSIGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +IKTP+M+ P+ +   ++   K L  +L ++ + +++
Subjt:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLRE-GYSMDDAKCLANKLKKITVADII

Query:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND
        + +++        KR    +Y+L  +F P     Q   +  ED+   +E  F + L ++I+ +    S    + +    +  K L++++    S+REE  
Subjt:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND

Query:  DDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTS
        D+++ GN +D  AE+   D    K+K +  +E+DYE + E E          E E +  +E +I  D     V      D+ E + + +  S  K  +  
Subjt:  DDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTS

Query:  NKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKVPAL
        ++ + A++        R I    +   F   +++  E  +      +    K++   S  +     ++     ++Y    I   +       + EK   L
Subjt:  NKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKVPAL

Query:  QTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETA
         T G++   L++  + LD R +YSNDIHAM  TYG+EAA   I +EI+++F+ YGI+V+ RHL+L+ADYM   G Y+P+NR  GI  S SP  +MTFET+
Subjt:  QTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETA

Query:  ARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
         +F+ QA   G  D L++PSA + +G  VK GTG F+L Q +
Subjt:  ARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

O54889 DNA-directed RNA polymerase I subunit RPA13.6e-6633.76Show/hide
Query:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL-REGYSMDDAKCLANKLKKITVADII
        LL+ K+  SL  PGE VG+LAAQSIGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +IKTP+M+ P+     ++   K L  +L ++ + +++
Subjt:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL-REGYSMDDAKCLANKLKKITVADII

Query:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND
        + +++        K+    +Y+L  +F P     Q   +  ED+   +E  F + L ++I+ +    S    +      +  K L +++    + REE  
Subjt:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND

Query:  DDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTS
        D+++ GN +D  AE+   D    K+K +  +E+DYE  SEEE   +E     E E  +G+ A  T++            D+ E   + + +S+    + S
Subjt:  DDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTS

Query:  NKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKVPAL
          +         +  +R I    + + F   +++  E  +      +    K++   S  +     ++     ++Y    I   +       + EK   L
Subjt:  NKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKVPAL

Query:  QTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETA
         T G++   L++  + LD R +YSNDIHA+  TYG+EAA   I +EI+++F+ YGI+V+ RHL+L+ADYM   G Y+P+NR  GI  S SP  +MTFET+
Subjt:  QTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETA

Query:  ARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
         +F+ QA   G  D L++PSA + +G  VK GTG F+L Q +
Subjt:  ARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

O95602 DNA-directed RNA polymerase I subunit RPA14.8e-6633.03Show/hide
Query:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCP-LREGYSMDDAKCLANKLKKITVADII
        LL+ K+  SL +PGE VG+LAAQSIGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM AS +IKTP+M+ P L    ++   K L  +L ++ + +++
Subjt:  LLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCP-LREGYSMDDAKCLANKLKKITVADII

Query:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNF-VPDSQSKGLSESDKVSSSEREEN
        + ++V      + K+    +Y+L  +F P     Q   +  ED+   +E  F + L +SI+ +    ++ S  +N     +  + L  + ++  S  E+ 
Subjt:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNF-VPDSQSKGLSESDKVSSSEREEN

Query:  DDDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKT
         D+++ G+ +D  AE+   D    K+K +  +E+DYE + EE           E E ++ D+ D+  +          +++Q E + +            
Subjt:  DDDDDVGNDLDV-AEDLGFDMK--KQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKT

Query:  SNKKKKAKSEFSR--KDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKV
        +  +K   S+  +  +  +R +    + + F   +++  E  +      +    K++   S  +     ++   G VIY    I   +       + EK 
Subjt:  SNKKKKAKSEFSR--KDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIK--VRKNIKPEEKEKV

Query:  PALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTF
          L T G++   L++  + LD R +YSNDIHA+  TYG+EAA   I +EI+++F+ YGI+V+ RHL+L+ADYM   G Y+P+NR  GI  + SP  +MTF
Subjt:  PALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTF

Query:  ETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
        ET+ +F+ QA   G  D L +PSA + +G  V+ GTG F+L Q +
Subjt:  ETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

P91875 DNA-directed RNA polymerase I subunit RPA14.3e-6734.48Show/hide
Query:  PSVLQEKAEVIYNSLAK----------DKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILM
        P+V   K ++ Y S+++           + P L  K+    ++  K + SLA PGEPVG++AAQSIGEPSTQMTLNTFH AGRGEMNVTLGIPRL+EILM
Subjt:  PSVLQEKAEVIYNSLAK----------DKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILM

Query:  TASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSI
         AS +IKTP M  P++ G     A+ L   L  +T+A+++E + V+       +R     Y +  +F P E   +   V  + + + +   F ++L  +I
Subjt:  TASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSI

Query:  QNEMLLLSRISGI-----KNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED-DSEEELNVKERSAGFESEVD
          ++   SR + I     K          L   D+V  S+ + NDDD    ND D A  +     K K R TDE DY+D D  EEL+             
Subjt:  QNEMLLLSRISGI-----KNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED-DSEEELNVKERSAGFESEVD

Query:  QGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQS
             D  +DD      +A  ED  E         KG+    ++   KA       D  +A +   K NH     K       L  +  +     +  + 
Subjt:  QGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQS

Query:  SGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVN
        +GK +   Q+   +  +IY GND                 L+T G++   +++    LD   +YSNDIHA+ +TYG+EAA + I++E+ N+F  YGI+V+
Subjt:  SGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVN

Query:  IRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI
         RHL+LIADYMT  G ++P++R  G+  S SP  +M+FE++ +F+  AA  G  D L +PS+R+ +GLPV+ GTG+F+L+ KI
Subjt:  IRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKI

Q9SVY0 DNA-directed RNA polymerase I subunit 16.2e-16754.62Show/hide
Query:  IRSYLFLFQNCEMIYQK-SHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDK--APGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTL
        I  +  L  N +M+ QK S       + YI++LP  L++ AE    ++  ++  A    ++++ ++L+++K+ +SLAQPGEPVGVLAAQS+GEPSTQMTL
Subjt:  IRSYLFLFQNCEMIYQK-SHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDK--APGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTL

Query:  NTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQ
        NTFH AGRGEMNVTLGIPRLQEILMTA+ +IKTPIMTCPL +G + +DA  + ++L+KITVADII+SME++VVP++  + E+CSI+KL+I  Y  E  P+
Subjt:  NTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQ

Query:  HAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSES-DKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED
        H  ++ ED EE +  VF+R+LED+I+  M +L RI GI N V    +   +++ D VS  + E++ DDD  G ++D   DLG D +KQK + TDEMDYE+
Subjt:  HAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSES-DKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED

Query:  DSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKF-TN
        +SE+E N     +G E       E D  N+DT E+ K+ T E Q E ++  K     K  K  +KKK+ K  F R   DR IFV  +G  FEVHFKF T+
Subjt:  DSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKF-TN

Query:  EPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEA
        +PHILL QIAQ+TAQKV IQ+SGKI RC    C + QVIYHG++ K R+ I  +EK+  PAL  +GVDF  LWE QD+LD RY+YSN IH ML  +GVEA
Subjt:  EPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEA

Query:  ARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL
        ARETIIREI ++F SYGISV+IRHL LIADYMT SGGYRPM+R+GGIA+S SPF RMTFETA +FIVQAA +GE DTLETPSARICLGLP   GTG FDL
Subjt:  ARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL

Query:  MQKIDV
        MQ++++
Subjt:  MQKIDV

Arabidopsis top hitse value%identityAlignment
AT3G57660.1 nuclear RNA polymerase A14.4e-16854.62Show/hide
Query:  IRSYLFLFQNCEMIYQK-SHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDK--APGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTL
        I  +  L  N +M+ QK S       + YI++LP  L++ AE    ++  ++  A    ++++ ++L+++K+ +SLAQPGEPVGVLAAQS+GEPSTQMTL
Subjt:  IRSYLFLFQNCEMIYQK-SHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDK--APGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTL

Query:  NTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQ
        NTFH AGRGEMNVTLGIPRLQEILMTA+ +IKTPIMTCPL +G + +DA  + ++L+KITVADII+SME++VVP++  + E+CSI+KL+I  Y  E  P+
Subjt:  NTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQ

Query:  HAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSES-DKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED
        H  ++ ED EE +  VF+R+LED+I+  M +L RI GI N V    +   +++ D VS  + E++ DDD  G ++D   DLG D +KQK + TDEMDYE+
Subjt:  HAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSES-DKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYED

Query:  DSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKF-TN
        +SE+E N     +G E       E D  N+DT E+ K+ T E Q E ++  K     K  K  +KKK+ K  F R   DR IFV  +G  FEVHFKF T+
Subjt:  DSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKF-TN

Query:  EPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEA
        +PHILL QIAQ+TAQKV IQ+SGKI RC    C + QVIYHG++ K R+ I  +EK+  PAL  +GVDF  LWE QD+LD RY+YSN IH ML  +GVEA
Subjt:  EPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEA

Query:  ARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL
        ARETIIREI ++F SYGISV+IRHL LIADYMT SGGYRPM+R+GGIA+S SPF RMTFETA +FIVQAA +GE DTLETPSARICLGLP   GTG FDL
Subjt:  ARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL

Query:  MQKIDV
        MQ++++
Subjt:  MQKIDV

AT4G35800.1 RNA polymerase II large subunit2.1e-2124.77Show/hide
Query:  LENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL--REGYSMDDAKCLANKLKKITVADII
        +E+++L SL  PGE +G +AAQSIGEP+TQMTLNTFH+AG    NVTLG+PRL+EI+  A + IKTP ++  L      S + AK +   L+  T+  + 
Subjt:  LENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQDIKTPIMTCPL--REGYSMDDAKCLANKLKKITVADII

Query:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND
        ++ EV   P                       +P  + +  ED E +  +  + + + S       L RI   +  + D   K LS +D       E +D
Subjt:  ESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREEND

Query:  DDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKK
        D   +                          + DD+ ++L ++ R        D+G + ++         +D ++ED   +                   
Subjt:  DDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKK

Query:  KKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEE----KEKVPALQ
        KK +S                                +LT++A R      I    K+   Q                 VRK+   EE      +   L 
Subjt:  KKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEE----KEKVPALQ

Query:  TTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAA
        T GV+   +    +++D +   SN +  +++  G+EA R  ++ E+R + S  G  VN RHL ++ D MT+ G    + R G   +   P  R +FE   
Subjt:  TTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAA

Query:  RFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL
          ++ AA + E D L   +  I LG    +GTG  +L
Subjt:  RFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDL

AT5G60040.1 nuclear RNA polymerase C11.3e-2622.8Show/hide
Query:  YQKSHHQPDSFNQYINELPSVLQEKA----EVIYNSLAKDKAPGLGQK--DDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEM
        + KS    D+F + + E  S+L  K+    +V+Y      KA G+  K  + F+++   +Y     + G  +G + AQSIGEP TQMTL TFH AG   M
Subjt:  YQKSHHQPDSFNQYINELPSVLQEKA----EVIYNSLAKDKAPGLGQK--DDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEM

Query:  NVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEE
        N+T G+PR+ EI+  AS++I TP+++  L     +  A+ +  +++K T+  + ES+EV +   S   R I                            +
Subjt:  NVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEE

Query:  ILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERS
        I+E   +     S++N +L   RI                          + ND+D                     +R  D                  
Subjt:  ILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERS

Query:  AGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRT
                                   T  D T ++D S++                                    HF +H      P+I++  I  +T
Subjt:  AGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRT

Query:  AQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIF
         ++V +     + + +QI            D K +  +  E    +  + T G++ +T              SN++  + +T G+EAAR TII EI  + 
Subjt:  AQKVSIQSSGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIF

Query:  SSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID
         ++G+S++IRH+ L+AD MT+ G    + R G      S   + +FE     +  AA  G+VD +E  +  + +G+P+K+GTG   ++Q+ D
Subjt:  SSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID

AT5G60040.2 nuclear RNA polymerase C11.4e-2522.41Show/hide
Query:  YQKSHHQPDSFNQYINELPSVLQEKA----EVIYNSLAKDKAPGLGQK--DDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEM
        + KS    D+F + + E  S+L  K+    +V+Y      KA G+  K  + F+++   +Y     + G  +G + AQSIGEP TQMTL TFH AG   M
Subjt:  YQKSHHQPDSFNQYINELPSVLQEKA----EVIYNSLAKDKAPGLGQK--DDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEM

Query:  NVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEE
        N+T G+PR+ EI+  AS++I TP+++  L     +  A+ +  +++K T+  + ES+EV +   S   R I                            +
Subjt:  NVTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEE

Query:  ILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERS
        I+E   +     S++N +L   RI                          + ND+D                     +R  D                  
Subjt:  ILEFVFVRELEDSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERS

Query:  AGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRT
                                   T  D T ++D S++                                    HF +H      P+I++  I  +T
Subjt:  AGFESEVDQGDEADITNDDTMEIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRT

Query:  AQKVSIQS------SGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIR
         ++V +        +  II C +  C                         +  + T G++ +T              SN++  + +T G+EAAR TII 
Subjt:  AQKVSIQS------SGKIIRCQQITCKEGQVIYHGNDIKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIR

Query:  EIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID
        EI  +  ++G+S++IRH+ L+AD MT+ G    + R G      S   + +FE     +  AA  G+VD +E  +  + +G+P+K+GTG   ++Q+ D
Subjt:  EIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPFSRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKID


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAGATCATACCTATTTTTATTTCAGAACTGCGAAATGATCTACCAAAAAAGTCATCATCAGCCTGACAGCTTTAATCAATACATCAATGAGCTGCCTTCAGTTCT
TCAAGAGAAAGCAGAAGTCATATATAATTCCCTTGCGAAGGATAAGGCTCCTGGTCTGGGACAAAAAGATGACTTTATCAGGCTGCTGGAGAATAAGTACCTGTCAAGTC
TTGCACAGCCTGGAGAACCAGTTGGTGTACTCGCTGCTCAGTCTATCGGAGAGCCATCAACACAAATGACGTTGAACACATTTCATCATGCTGGGCGTGGTGAGATGAAT
GTGACTCTTGGAATTCCCCGCCTTCAAGAGATTTTGATGACTGCTTCACAAGATATTAAGACACCAATTATGACATGCCCATTGCGAGAGGGCTACTCAATGGATGATGC
AAAGTGTCTTGCTAATAAGTTGAAGAAGATTACAGTAGCTGACATAATAGAAAGTATGGAAGTAACTGTTGTGCCATTTTCGCAACGGAAGCGAGAGATATGCAGTATTT
ATAAGCTTGAAATAAGATTTTACCCACTTGAAAGTAATCCACAGCATGCTCATGTATCTTCAGAAGATTTGGAAGAAATTTTGGAATTTGTGTTCGTTAGGGAGTTGGAA
GATTCAATCCAAAATGAAATGCTCTTACTATCACGAATTAGTGGTATAAAAAATTTTGTGCCCGACTCACAATCAAAGGGTTTGAGTGAAAGCGATAAAGTAAGTAGCTC
AGAACGTGAAGAAAATGATGATGATGATGATGTTGGCAATGACTTAGATGTTGCTGAAGATCTTGGTTTTGACATGAAAAAACAAAAACTTCGAACTACTGATGAGATGG
ATTATGAAGATGATTCGGAAGAGGAACTCAATGTGAAAGAACGGTCCGCAGGATTTGAAAGTGAAGTTGATCAAGGTGATGAGGCTGATATAACCAATGATGATACGATG
GAAATTGTTAAAGACGCTACATCTGAGGATCAGACTGAGATAATAGATGTCTCAAAGTCCAATTCGAAAGGGAAAACAACCAAAACATCAAACAAAAAGAAGAAAGCTAA
ATCTGAATTCTCCAGAAAGGATTATGATAGAGCAATTTTTGTGTCAGCGAAGGGAAATCATTTTGAAGTCCATTTTAAGTTTACCAATGAACCTCATATTTTACTGACGC
AGATTGCTCAGAGAACGGCCCAGAAGGTGTCTATCCAAAGCTCTGGCAAAATCATCCGCTGTCAACAAATTACTTGCAAGGAAGGTCAGGTAATCTACCACGGGAATGAT
ATTAAGGTAAGAAAGAATATCAAACCAGAGGAAAAGGAAAAAGTTCCTGCATTGCAGACGACTGGAGTCGACTTTAAGACGCTCTGGGAGTTACAAGATGAGCTTGATGC
TAGATATATATATTCCAATGACATTCATGCCATGCTACAAACATATGGAGTGGAAGCGGCTAGGGAAACAATAATAAGAGAAATTCGAAACATTTTCAGTTCATATGGGA
TATCAGTCAATATTAGACATCTAACTCTAATTGCTGATTATATGACTCATTCTGGTGGGTACCGACCAATGAATCGATTAGGAGGCATAGCCGACTCAATATCTCCTTTC
AGTCGAATGACTTTTGAGACGGCTGCAAGGTTCATTGTTCAAGCTGCATACCATGGGGAAGTAGACACCTTGGAAACTCCATCTGCTAGGATCTGTCTTGGTTTGCCAGT
AAAGATGGGAACCGGTAGTTTTGATTTGATGCAGAAAATCGATGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAGATCATACCTATTTTTATTTCAGAACTGCGAAATGATCTACCAAAAAAGTCATCATCAGCCTGACAGCTTTAATCAATACATCAATGAGCTGCCTTCAGTTCT
TCAAGAGAAAGCAGAAGTCATATATAATTCCCTTGCGAAGGATAAGGCTCCTGGTCTGGGACAAAAAGATGACTTTATCAGGCTGCTGGAGAATAAGTACCTGTCAAGTC
TTGCACAGCCTGGAGAACCAGTTGGTGTACTCGCTGCTCAGTCTATCGGAGAGCCATCAACACAAATGACGTTGAACACATTTCATCATGCTGGGCGTGGTGAGATGAAT
GTGACTCTTGGAATTCCCCGCCTTCAAGAGATTTTGATGACTGCTTCACAAGATATTAAGACACCAATTATGACATGCCCATTGCGAGAGGGCTACTCAATGGATGATGC
AAAGTGTCTTGCTAATAAGTTGAAGAAGATTACAGTAGCTGACATAATAGAAAGTATGGAAGTAACTGTTGTGCCATTTTCGCAACGGAAGCGAGAGATATGCAGTATTT
ATAAGCTTGAAATAAGATTTTACCCACTTGAAAGTAATCCACAGCATGCTCATGTATCTTCAGAAGATTTGGAAGAAATTTTGGAATTTGTGTTCGTTAGGGAGTTGGAA
GATTCAATCCAAAATGAAATGCTCTTACTATCACGAATTAGTGGTATAAAAAATTTTGTGCCCGACTCACAATCAAAGGGTTTGAGTGAAAGCGATAAAGTAAGTAGCTC
AGAACGTGAAGAAAATGATGATGATGATGATGTTGGCAATGACTTAGATGTTGCTGAAGATCTTGGTTTTGACATGAAAAAACAAAAACTTCGAACTACTGATGAGATGG
ATTATGAAGATGATTCGGAAGAGGAACTCAATGTGAAAGAACGGTCCGCAGGATTTGAAAGTGAAGTTGATCAAGGTGATGAGGCTGATATAACCAATGATGATACGATG
GAAATTGTTAAAGACGCTACATCTGAGGATCAGACTGAGATAATAGATGTCTCAAAGTCCAATTCGAAAGGGAAAACAACCAAAACATCAAACAAAAAGAAGAAAGCTAA
ATCTGAATTCTCCAGAAAGGATTATGATAGAGCAATTTTTGTGTCAGCGAAGGGAAATCATTTTGAAGTCCATTTTAAGTTTACCAATGAACCTCATATTTTACTGACGC
AGATTGCTCAGAGAACGGCCCAGAAGGTGTCTATCCAAAGCTCTGGCAAAATCATCCGCTGTCAACAAATTACTTGCAAGGAAGGTCAGGTAATCTACCACGGGAATGAT
ATTAAGGTAAGAAAGAATATCAAACCAGAGGAAAAGGAAAAAGTTCCTGCATTGCAGACGACTGGAGTCGACTTTAAGACGCTCTGGGAGTTACAAGATGAGCTTGATGC
TAGATATATATATTCCAATGACATTCATGCCATGCTACAAACATATGGAGTGGAAGCGGCTAGGGAAACAATAATAAGAGAAATTCGAAACATTTTCAGTTCATATGGGA
TATCAGTCAATATTAGACATCTAACTCTAATTGCTGATTATATGACTCATTCTGGTGGGTACCGACCAATGAATCGATTAGGAGGCATAGCCGACTCAATATCTCCTTTC
AGTCGAATGACTTTTGAGACGGCTGCAAGGTTCATTGTTCAAGCTGCATACCATGGGGAAGTAGACACCTTGGAAACTCCATCTGCTAGGATCTGTCTTGGTTTGCCAGT
AAAGATGGGAACCGGTAGTTTTGATTTGATGCAGAAAATCGATGTCTGATGAGTCCCTTTGGTCTCATATCTTGAGTTTTGAGTTATTTGATCGACTAATTTAATCACCC
ATCAATTAATTAGTTGTCATTGGAAGAGATTGTCTGCAGTGTGTAGAATTTGGATGCTACAAGATTTTGTATTATTAGCTTATAGTTGTATTATTTATAGTGTTTACATG
TAGAAACGAACATGCAAGGATGTTGAAAAGTCCAAAAAAATGGCACAAAATTTTGTCCCGTTGAGAAATACTTGGATTGTAATTAGTATTTTATCGACATGATATTCTGA
ACAGTCCTCTACTAGTTATCAAATCTGAACAGTCCTCTACTAGTTATCAAAT
Protein sequenceShow/hide protein sequence
MIRSYLFLFQNCEMIYQKSHHQPDSFNQYINELPSVLQEKAEVIYNSLAKDKAPGLGQKDDFIRLLENKYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMN
VTLGIPRLQEILMTASQDIKTPIMTCPLREGYSMDDAKCLANKLKKITVADIIESMEVTVVPFSQRKREICSIYKLEIRFYPLESNPQHAHVSSEDLEEILEFVFVRELE
DSIQNEMLLLSRISGIKNFVPDSQSKGLSESDKVSSSEREENDDDDDVGNDLDVAEDLGFDMKKQKLRTTDEMDYEDDSEEELNVKERSAGFESEVDQGDEADITNDDTM
EIVKDATSEDQTEIIDVSKSNSKGKTTKTSNKKKKAKSEFSRKDYDRAIFVSAKGNHFEVHFKFTNEPHILLTQIAQRTAQKVSIQSSGKIIRCQQITCKEGQVIYHGND
IKVRKNIKPEEKEKVPALQTTGVDFKTLWELQDELDARYIYSNDIHAMLQTYGVEAARETIIREIRNIFSSYGISVNIRHLTLIADYMTHSGGYRPMNRLGGIADSISPF
SRMTFETAARFIVQAAYHGEVDTLETPSARICLGLPVKMGTGSFDLMQKIDV