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Carg01333 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01333
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGlutamate decarboxylase
Genome locationCarg_Chr15:4681930..4682187
RNA-Seq ExpressionCarg01333
SyntenyCarg01333
Gene Ontology termsGO:0006536 - glutamate metabolic process (biological process)
GO:0004351 - glutamate decarboxylase activity (molecular function)
GO:0030170 - pyridoxal phosphate binding (molecular function)
InterPro domainsIPR010107 - Glutamate decarboxylase
IPR015424 - Pyridoxal phosphate-dependent transferase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579168.1 Glutamate decarboxylase 4, partial [Cucurbita argyrosperma subsp. sororia]8.8e-4098.81Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
        MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLR+VIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG

KAG7016685.1 Glutamate decarboxylase 2, partial [Cucurbita argyrosperma subsp. argyrosperma]3.6e-41100Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGY
        MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGY
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGY

XP_008466806.1 PREDICTED: glutamate decarboxylase 4-like [Cucumis melo]2.1e-3387.8Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DI+KVL ELD+LPP K+
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN

XP_022939390.1 glutamate decarboxylase-like [Cucurbita moschata]8.8e-4098.81Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
        MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLR+VIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG

XP_031740882.1 glutamate decarboxylase 4 [Cucumis sativus]2.1e-3390.12Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNK
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DIVKVL ELD+LPP K
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNK

TrEMBL top hitse value%identityAlignment
A0A0A0KLK1 Glutamate decarboxylase1.0e-3390.12Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNK
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DIVKVL ELD+LPP K
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNK

A0A1S3CS98 Glutamate decarboxylase1.0e-3387.8Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DI+KVL ELD+LPP K+
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN

A0A5D3BBG3 Glutamate decarboxylase1.0e-3387.8Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DI+KVL ELD+LPP K+
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN

A0A6J1FMK3 Glutamate decarboxylase4.3e-4098.81Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
        MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLR+VIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG

A0A6J1JP71 Glutamate decarboxylase1.3e-3389.29Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG
        MGVPVVAFSLKDR+RHDEFEVSEMLRRFGW+VPAYPMPEGAKHVSVLR+VIREDFSRTLA RLV DIVKVL ELD+LPP KN G
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMG

SwissProt top hitse value%identityAlignment
Q07346 Glutamate decarboxylase6.2e-2870.73Show/hide
Query:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN
        +GVP+VAFSLKD  +H+EFE+SE LRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV+DI KVL ELD+LP   N
Subjt:  MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKN

Q42472 Glutamate decarboxylase 22.8e-2872.94Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG
        GVPVVAFSLKD + H+EFE+SEMLRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV DI KVL ELD+LP   +K MG
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG

Q42521 Glutamate decarboxylase 15.8e-2671.43Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD + H EFE+S+MLRR+GW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV DI KV+ ELD LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP

Q9ZPS3 Glutamate decarboxylase 42.0e-2674.03Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD +RH+EFEV+  LRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA RLV D  KVL ELD+LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP

Q9ZPS4 Glutamate decarboxylase 31.0e-2776.62Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD +RH+EFEV+EMLRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA RLV D  KVL ELD+LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP

Arabidopsis top hitse value%identityAlignment
AT1G65960.1 glutamate decarboxylase 22.0e-2972.94Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG
        GVPVVAFSLKD + H+EFE+SEMLRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV DI KVL ELD+LP   +K MG
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG

AT1G65960.2 glutamate decarboxylase 22.0e-2972.94Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG
        GVPVVAFSLKD + H+EFE+SEMLRRFGW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV DI KVL ELD+LP   +K MG
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPP--NKNMG

AT2G02000.1 glutamate decarboxylase 37.5e-2976.62Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD +RH+EFEV+EMLRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA RLV D  KVL ELD+LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP

AT2G02010.1 glutamate decarboxylase 41.4e-2774.03Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD +RH+EFEV+  LRRFGW+VPAY MP  A+HV+VLR+VIREDFSRTLA RLV D  KVL ELD+LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP

AT5G17330.1 glutamate decarboxylase4.1e-2771.43Show/hide
Query:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP
        GVP+VAFSLKD + H EFE+S+MLRR+GW+VPAY MP  A+H++VLR+VIREDFSRTLA RLV DI KV+ ELD LP
Subjt:  GVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTCGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAAT
GCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTATGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGACGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGC
TAGACAGTCTTCCACCAAATAAGAACATGGGGTATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGAGTCCCCGTGGTGGCGTTCAGTCTCAAAGACAGAACTCGCCACGACGAATTCGAGGTGTCAGAAATGTTACGACGGTTCGGGTGGATGGTGCCGGCGTATCCAAT
GCCAGAGGGGGCCAAGCATGTGTCAGTTCTTCGTATGGTGATTAGAGAAGATTTCTCTCGCACCCTTGCGGGACGTCTTGTGCAGGACATCGTGAAGGTTCTGGGAGAGC
TAGACAGTCTTCCACCAAATAAGAACATGGGGTATTAA
Protein sequenceShow/hide protein sequence
MGVPVVAFSLKDRTRHDEFEVSEMLRRFGWMVPAYPMPEGAKHVSVLRMVIREDFSRTLAGRLVQDIVKVLGELDSLPPNKNMGY