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Carg01347 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01347
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:4570764..4571240
RNA-Seq ExpressionCarg01347
SyntenyCarg01347
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579153.1 Meiosis regulator and mRNA stability factor 1, partial [Cucurbita argyrosperma subsp. sororia]1.0e-56100Show/hide
Query:  MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG
        MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG
Subjt:  MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG

Query:  ATVIDDAQQLV
        ATVIDDAQQLV
Subjt:  ATVIDDAQQLV
KAG7016671.1 hypothetical protein SDJN02_21781, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-56100Show/hide
Query:  MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG
        MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG
Subjt:  MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGG

Query:  ATVIDDAQQLV
        ATVIDDAQQLV
Subjt:  ATVIDDAQQLV
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGCAGTGGATCAGCTTGAAGAAGTCAGCCAGCGGATCCAACATGGTGCCATTCTCAAGCTTCTCTTTTCTTTTCTATTCTCCCTAGATATGGATGAAGCTCCTAA
AATGTTCTTGTCTAGTTGTATTACAGTAGGTTGCTGTACTCTGTCTGCTTATGGGATTGATCTGCCTGATTTTGGGATGGGTCATGTTAACATTGATGCCTTTTCTTTCA
CCCAGCCGTCTAAATTGGTTCAATCATTCAAAAGTGATCAATCATTGGTGTGGTGGCGGCCAACTACTTCCTACGGCGGCGCAACTGTTATTGACGACGCCCAACAACTG
GTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGGCAGTGGATCAGCTTGAAGAAGTCAGCCAGCGGATCCAACATGGTGCCATTCTCAAGCTTCTCTTTTCTTTTCTATTCTCCCTAGATATGGATGAAGCTCCTAA
AATGTTCTTGTCTAGTTGTATTACAGTAGGTTGCTGTACTCTGTCTGCTTATGGGATTGATCTGCCTGATTTTGGGATGGGTCATGTTAACATTGATGCCTTTTCTTTCA
CCCAGCCGTCTAAATTGGTTCAATCATTCAAAAGTGATCAATCATTGGTGTGGTGGCGGCCAACTACTTCCTACGGCGGCGCAACTGTTATTGACGACGCCCAACAACTG
GTGTGA
Protein sequenceShow/hide protein sequence
MPAVDQLEEVSQRIQHGAILKLLFSFLFSLDMDEAPKMFLSSCITVGCCTLSAYGIDLPDFGMGHVNIDAFSFTQPSKLVQSFKSDQSLVWWRPTTSYGGATVIDDAQQL
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