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Carg01354 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01354
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein COP1 SUPPRESSOR 2-like
Genome locationCarg_Chr15:4542993..4544202
RNA-Seq ExpressionCarg01354
SyntenyCarg01354
Gene Ontology termsNA
InterPro domainsIPR010756 - Telomere length and silencing protein 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579146.1 Protein COP1 SUPPRESSOR 2, partial [Cucurbita argyrosperma subsp. sororia]3.1e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

KAG7016664.1 hypothetical protein SDJN02_21774, partial [Cucurbita argyrosperma subsp. argyrosperma]1.3e-63100Show/hide
Query:  MWVFSTDIYEVCSTARCSICDRFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTE
        MWVFSTDIYEVCSTARCSICDRFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTE
Subjt:  MWVFSTDIYEVCSTARCSICDRFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTE

Query:  AAGQRQAATDEFMLERFRKRERHRGMRR
        AAGQRQAATDEFMLERFRKRERHRGMRR
Subjt:  AAGQRQAATDEFMLERFRKRERHRGMRR

XP_022938620.1 protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita moschata]3.1e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

XP_022993503.1 protein COP1 SUPPRESSOR 2-like isoform X1 [Cucurbita maxima]3.1e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

XP_023549511.1 protein COP1 SUPPRESSOR 2 [Cucurbita pepo subsp. pepo]3.1e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

TrEMBL top hitse value%identityAlignment
A0A6J1CX27 uncharacterized protein C9orf78 homolog4.6e-4694.34Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSS+SADYFHRGRDYAEKLRR+HPELYK R+LQ+DGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HR MRR
Subjt:  HRGMRR

A0A6J1E915 protein COP1 SUPPRESSOR 2-like1.2e-4695.28Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSS+SADYFHRGRDYAEKLRREHPELYK RNLQ+DGSGSKPTD+GTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HR MRR
Subjt:  HRGMRR

A0A6J1FKA0 protein COP1 SUPPRESSOR 2-like isoform X11.5e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

A0A6J1JM60 protein COP1 SUPPRESSOR 2-like1.2e-4695.28Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSS+SADYFHRGRDYAEKLRREHPELYK RNLQ+DGSGSKPTD+GTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HR MRR
Subjt:  HRGMRR

A0A6J1K2G2 protein COP1 SUPPRESSOR 2-like isoform X11.5e-49100Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
        FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATDEFMLERFRKRER

Query:  HRGMRR
        HRGMRR
Subjt:  HRGMRR

SwissProt top hitse value%identityAlignment
F4HVZ5 Protein COP1 SUPPRESSOR 22.1e-3269.64Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLER
        +KLKNIEETEAAKKLLQE+R +GR KSEFSIPSS+SADYF RG+DYAEKLRREHPELYK R   Q DG  +KP     T+   ++   RQAATD+ MLER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLER

Query:  FRKRERHRGMRR
        FRKRER+R MRR
Subjt:  FRKRERHRGMRR

Arabidopsis top hitse value%identityAlignment
AT1G02330.1 CONTAINS InterPro DOMAIN/s: Hepatocellular carcinoma-associated antigen 59 (InterPro:IPR010756); Has 1239 Blast hits to 998 proteins in 204 species: Archae - 4; Bacteria - 71; Metazoa - 421; Fungi - 109; Plants - 87; Viruses - 5; Other Eukaryotes - 542 (source: NCBI BLink).1.5e-3369.64Show/hide
Query:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLER
        +KLKNIEETEAAKKLLQE+R +GR KSEFSIPSS+SADYF RG+DYAEKLRREHPELYK R   Q DG  +KP     T+   ++   RQAATD+ MLER
Subjt:  FKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGR-NLQEDGSGSKP-----TDTGTEAAGQRQAATDEFMLER

Query:  FRKRERHRGMRR
        FRKRER+R MRR
Subjt:  FRKRERHRGMRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGTATTTTCCACTGACATTTATGAAGTGTGTTCAACTGCTCGTTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCT
TTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAA
GAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACTGAT
GAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGGTATTTTCCACTGACATTTATGAAGTGTGTTCAACTGCTCGTTGCTCTATTTGTGACAGATTCAAGTTGAAGAACATTGAAGAAACCGAGGCTGCAAAAAAGCT
TTTGCAGGAGAAGAGATTTGTGGGTCGGTCAAAATCAGAGTTTAGCATCCCCTCAAGTTTTAGTGCTGATTATTTCCACCGGGGCAGGGATTATGCTGAAAAACTTAGAA
GAGAACATCCTGAGCTATACAAGGGTAGAAATTTGCAAGAGGATGGTTCTGGTTCCAAACCAACTGATACTGGCACAGAGGCTGCAGGACAAAGGCAGGCTGCCACTGAT
GAGTTCATGCTAGAACGCTTCCGGAAACGGGAACGCCATCGTGGTATGCGGAGGTAACATATTTCTCGGACTGCTGTTTCTCCAGAATAGGAAGTGACCTACTTGATAAG
TTAAGCATCAAGGATAAAGGTTTTGGTCGTACAAATATTCTTTCACATCATGATGGCCATCTCAGGACCTCGGGTTAGAGAGGAAATGAAATCCATTCTTAGTTCATAGT
TGTGAAGTCGGCTGACTGACTTATGATTCAAAGAGAGTTTTGGATATACTATCTACTTGTGTCTTAGTCTAGCCTCTTTGTGTTACTTTTTAGGTTTTTCAGCTTTCATG
TACTAGTGCAGAGATAGGTCAAAAGATGTGGAAAGAAAACGTCCTTTTATGGTGACGTTGAGATATTGAGAACATGAACGATACCGATGAAGGAAAATTGTAGACGATAT
GTTATTAGATGATGTCTTAGCTAATTAATTCCAGTTTTATTATGTTACTCTATTCTATCTCTTTTGTTAGTATTGTGATGCAACATAAACTATAAGATAAGAAACAATGG
TAACTAAGGTACATTACTTTAGGTTTATTGTGAAACTATTTTCC
Protein sequenceShow/hide protein sequence
MWVFSTDIYEVCSTARCSICDRFKLKNIEETEAAKKLLQEKRFVGRSKSEFSIPSSFSADYFHRGRDYAEKLRREHPELYKGRNLQEDGSGSKPTDTGTEAAGQRQAATD
EFMLERFRKRERHRGMRR