; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg01374 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01374
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionProtein SIS2
Genome locationCarg_Chr15:4423787..4426173
RNA-Seq ExpressionCarg01374
SyntenyCarg01374
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579120.1 hypothetical protein SDJN03_23568, partial [Cucurbita argyrosperma subsp. sororia]6.5e-6197.79Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLE  LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
KAG7016644.1 hypothetical protein SDJN02_21754 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-64100Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
XP_022938548.1 uncharacterized protein LOC111444753 [Cucurbita moschata]7.9e-5994.85Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPV+PARAFFRPSKLSPAVRF GD SAVK LRLVTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
XP_022993784.1 uncharacterized protein LOC111489690 [Cucurbita maxima]4.4e-5793.38Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPV PARA FRPSKLSPAVRF GD SAVK LR+VTTRAGASTSSYIFAFSI FSLILVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
XP_023551003.1 uncharacterized protein LOC111808971 [Cucurbita pepo subsp. pepo]1.8e-5894.85Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPV+PARAFFRPSK  PAVRFSGD SAVK LRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
TrEMBL top hitse value%identityAlignment
A0A1S3CQ37 uncharacterized protein LOC1035034021.3e-4377.21Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MAR LISTR  FP S+LP++P RAFFRP   SP VRFS  PS  + LR+V TRAGASTSSYIFAFSIP SLIL+T LTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDE+ + DG+ ISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
A0A6J1FJ66 uncharacterized protein LOC1114447533.8e-5994.85Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPV+PARAFFRPSKLSPAVRF GD SAVK LRLVTTRAGASTSSYIFAFSIPFSL+LVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
A0A6J1HEK5 uncharacterized protein LOC1114623101.0e-5188.89Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRA FP   LP+ PARAFFRPSKLSPAVRFSGDPSA +ALR+VTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAE
        IMEEDEENKD  S I FEEKP LPRTRNRPKREAE
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAE
A0A6J1JTZ0 uncharacterized protein LOC1114874917.3e-5087.31Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAF      P+ PARAFFRPSKLSPAVRFSGDPSA + LR+VTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREA
        IMEEDEENKD  S ISFEEKP LPRTRNRPKREA
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREA
A0A6J1K146 uncharacterized protein LOC1114896902.1e-5793.38Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA
        MARLLISTRAFFPHSTLPV PARA FRPSKLSPAVRF GD SAVK LR+VTTRAGASTSSYIFAFSI FSLILVTALTALKIGDNLDKKFLEE LALNQA
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQA

Query:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
        IMEEDEENKDDGSGISFEEKP LPRTRNRPKREAEV
Subjt:  IMEEDEENKDDGSGISFEEKPGLPRTRNRPKREAEV
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31560.1 high chlorophyll fluorescence 1538.3e-1441.61Show/hide
Query:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALR--LVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALN
        MARL +S        + P S ++    P   +     +G     + +R   V TRAG STSSY+ AF+IP +LI  T  T++KI D LD+ FLE+ +ALN
Subjt:  MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALR--LVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALN

Query:  QAI--MEEDEENKDDGSGISFEEKPGLPRTRNRPKRE
        QAI   E+ E  + D S     ++P L RTRNRPKRE
Subjt:  QAI--MEEDEENKDDGSGISFEEKPGLPRTRNRPKRE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGGCTCCTTATCTCGACACGAGCCTTCTTCCCCCATTCCACTCTCCCCGTCTCTCCGGCGCGGGCGTTCTTCAGACCTTCCAAATTGTCGCCGGCGGTCAGATT
CTCCGGCGACCCATCGGCGGTTAAAGCTCTACGATTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCTATTCCGTTCTCTCTCATTCTCG
TCACTGCCCTCACCGCTCTTAAGATCGGCGATAACCTCGACAAGAAATTTCTTGAGGAGCAGCTTGCTCTTAATCAAGCCATCATGGAGGAAGATGAGGAGAACAAAGAT
GATGGTTCAGGAATATCTTTCGAAGAAAAACCAGGCCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCCGAGGTATGA
mRNA sequenceShow/hide mRNA sequence
AAATCCGTAGTCTTCAAGAGCTATGGCGAGGCTCCTTATCTCGACACGAGCCTTCTTCCCCCATTCCACTCTCCCCGTCTCTCCGGCGCGGGCGTTCTTCAGACCTTCCA
AATTGTCGCCGGCGGTCAGATTCTCCGGCGACCCATCGGCGGTTAAAGCTCTACGATTGGTGACGACTCGTGCCGGCGCCAGCACCAGCAGTTACATCTTCGCCTTCTCT
ATTCCGTTCTCTCTCATTCTCGTCACTGCCCTCACCGCTCTTAAGATCGGCGATAACCTCGACAAGAAATTTCTTGAGGAGCAGCTTGCTCTTAATCAAGCCATCATGGA
GGAAGATGAGGAGAACAAAGATGATGGTTCAGGAATATCTTTCGAAGAAAAACCAGGCCTTCCACGAACTCGCAACCGCCCTAAAAGGGAAGCCGAGGTATGAATAATTG
CTTAGTTTTTTTTGGAGGTGTTCATATGATTGGATTAGACGGCTGAGAAATGGGCAAGGAACTTGGAAACTTCCCTGTATATTGTAGATATACATTATCAATACAATAAA
ACTACCATATTGCATGTTCATTTGTTATCAAGTCTGTAACTGGTATATCATATCAATTAGAAATGACATACCAATGATATTTGAAATTGTCGGTCTGAAGCATTGAGTGT
TTTAGAAAAGTTTATTTACTTGGTAGAAATTCAATTGGCTTTTAATGCAAGATATAATGTAGTCAAGATGTAGGTGTATTTCTTACCACCTAAGCTTCTACACTCTGCAA
ATAGGCAACAAACGTTGAATGACCTCTATGTTCTGCTGTAGTTGAAATTGTTTTTGATCCCTCTCTCTCATAAATATTTACATTTCCATTAACTTTTCACTTTCTACTTT
Protein sequenceShow/hide protein sequence
MARLLISTRAFFPHSTLPVSPARAFFRPSKLSPAVRFSGDPSAVKALRLVTTRAGASTSSYIFAFSIPFSLILVTALTALKIGDNLDKKFLEEQLALNQAIMEEDEENKD
DGSGISFEEKPGLPRTRNRPKREAEV