CuGenDBv2

Gene ID	Carg01382
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	U3 small nucleolar ribonucleoprotein protein IMP4
Genome location	Carg_Chr15:4382745..4388967
RNA-Seq Expression	Carg01382
Synteny	Carg01382
Gene Ontology terms	GO:0006364 - rRNA processing (biological process) GO:0016363 - nuclear matrix (cellular component) GO:0032040 - small-subunit processome (cellular component) GO:0034457 - Mpp10 complex (cellular component) GO:0003729 - mRNA binding (molecular function) GO:0030515 - snoRNA binding (molecular function) GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domains	IPR007109 - Brix domain IPR044281 - U3 snoRNP protein/Ribosome production factor 1

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579112.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. sororia]

3.5e-199

100

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Query:  HPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPT
        HPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPT
Subjt:  HPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPT

Query:  ELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRG
        ELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRG
Subjt:  ELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRG

Query:  VPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK
        VPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK
Subjt:  VPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAK

Query:  SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  SIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

KAG7016636.1 U3 small nucleolar ribonucleoprotein IMP4, partial [Cucurbita argyrosperma subsp. argyrosperma]

3.1e-200

100

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Query:  MIHPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPF
        MIHPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPF
Subjt:  MIHPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPF

Query:  PTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEH
        PTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEH
Subjt:  PTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEH

Query:  RGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG
        RGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG
Subjt:  RGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGG

Query:  AKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        AKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  AKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

XP_022939256.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita moschata]

1.6e-164

100

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

XP_022993779.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Cucurbita maxima]

1.4e-163

99.66

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

XP_038907229.1 U3 small nucleolar ribonucleoprotein protein IMP4 [Benincasa hispida]

1.7e-161

97.6

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CPI1 U3 small nucleolar ribonucleoprotein protein IMP4

8.2e-162

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG

A0A5D3BJ53 U3 small nucleolar ribonucleoprotein IMP4

8.2e-162

97.6

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELED+LTAVPRTHIDDEYANAS++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEI+DKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG
        RTAN+LKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR FLG
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLG

A0A6J1DUL2 U3 small nucleolar ribonucleoprotein protein IMP4

7.6e-160

95.9

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKP PTELRNEEAALRKEIELEDD TAVPRTHIDDEYAN S++DPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVI+EIIETCRAHEFTDVILVHEHRGVPDGLI+SHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        RTAN+LKHLFPVPKPDTKRV+TFANQSDYISFRHHIYEK GG KSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKR+FLGD
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

A0A6J1FFE4 U3 small nucleolar ribonucleoprotein protein IMP4

7.9e-165

100

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

A0A6J1K117 U3 small nucleolar ribonucleoprotein protein IMP4

6.7e-164

99.66

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK GGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

SwissProt top hits

e value

%identity

Alignment

Q0VD01 U3 small nucleolar ribonucleoprotein protein IMP4

6.8e-89

56.16

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  ER   E+K K+R ALEE +  PTELR E  AL+  +E +D        H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GT  EA PH+I++ F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL
        R +++L++LFPVPK D++RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T  KR FL
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL

Q5PQR5 U3 small nucleolar ribonucleoprotein protein IMP4

8.9e-89

55.82

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL
        R +++L++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL

Q5R947 U3 small nucleolar ribonucleoprotein protein IMP4

1.5e-88

55.82

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL
        R +++L++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL

Q8VHZ7 U3 small nucleolar ribonucleoprotein protein IMP4

8.9e-89

55.82

Show/hide

Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R + EKK +++ ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL
        R +++L++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL

Q96G21 U3 small nucleolar ribonucleoprotein protein IMP4

1.5e-88

55.82

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        MLRR  RLRREYLYRK+ E  +R   E+K ++R ALEE +  PTELR E  AL+  +E +D       +H+DDEY  A   DPK++ITTSRDPS+ L  F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
        AKELK+VFP AQRMNRG   +  ++  C+A+  TD+++VHEHRG P GLI+SHLPFGPTAYF L NVV RH+I D   +GTM EA PH+I + F+++LG+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL
        R +++L++LFPVPK D+ RV+TFANQ DYISFRHH+Y+K    +++EL E+GPRFEL+LY I+LGT++Q   A  EW   PY  T +KR FL
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQ-TEAQNEWVIRPYMKTTKKRQFL

Arabidopsis top hits

e value

%identity

Alignment

AT1G63780.1 Ribosomal RNA processing Brix domain protein

5.1e-132

75.51

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Query:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF
        M RR +RL++EY+YRKSLEG ER +YE+KR IREAL+EGKP PTELRN EA LR+EI+LED  TAVPR+HIDDEYANA++ DPKIL+TTSR+PSAPL +F
Subjt:  MLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAALRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQF

Query:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE
         KELK VFPN+QR+NRG QVI+EIIET R+H+FTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRH+I DKK++G MPE YPH+I NNFTT++G+
Subjt:  AKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGE

Query:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD
        R  N+LKH+FP PK D KR+VTF+NQSDYISFR+H+Y+K  GG KSIELKEIGPRFELRLYQ+KLGTV+Q EA+ EWVIRPYM T+KKR+F+G+
Subjt:  RTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEK-HGGAKSIELKEIGPRFELRLYQIKLGTVDQTEAQNEWVIRPYMKTTKKRQFLGD

AT4G01560.1 Ribosomal RNA processing Brix domain protein

4.7e-37

36.31

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Query:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPFPTEL---------RNEEAALR-KEIELEDDLTAVPRTHIDDEY--ANASQIDPKILITT
        +R  +Y K    K+    EK++KIR        ALE G+  P ++          ++E   R  + EL  D+ A       DE+      +I PK+L+TT
Subjt:  RREYLYRKSLEGKERLLYEKKRKIR-------EALEEGKPFPTEL---------RNEEAALR-KEIELEDDLTAVPRTHIDDEY--ANASQIDPKILITT

Query:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHI
         R  S        EL  V PN+    RG   + +I+E     +FT +I+VH +R  PD L+I  LP GPTA+F L N+V R +IK+    G      P +
Subjt:  SRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYFGLLNVVTRHEIKDKKAMGTMPEAYPHI

Query:  ILNNFTTKLGERTANVLKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWV
        +LNNFTT+LG R     + LFP P P+   +RVVTF NQ D+I FRHH Y           G  ++I+  L+E GPRF L+L  ++ GT D    + EWV
Subjt:  ILNNFTTKLGERTANVLKHLFPVPKPD--TKRVVTFANQSDYISFRHHIY--------EKHGGAKSIE--LKEIGPRFELRLYQIKLGTVDQTEAQNEWV

Query:  IRPYMKTTKKRQFL
         +P M T+++R FL
Subjt:  IRPYMKTTKKRQFL

Sequences

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CDS sequence

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ATGATCCACCCCTCCCTCCCATCGACAGTCGCTGCACCCTGCTCCGCCTCACGCTGCTCGCCGCTCGCCGCGCGTTACTATAATTGCCGCTACTTCTCCGATTCCGTGAC
GCATCGGCCACCGTCTTTCTTCGAGTTCTTATTATTCAATACTCTAGGTGAGGATTTGGCGGCAATGTTGCGAAGAAACATTCGGCTGAGGAGGGAGTATTTGTACAGAA
AGAGTTTAGAAGGCAAGGAACGTTTGCTTTATGAGAAGAAGCGGAAGATTAGAGAAGCCCTAGAAGAGGGAAAACCTTTTCCTACTGAACTCCGGAATGAGGAGGCGGCA
CTTCGTAAAGAAATTGAACTCGAGGATGATCTCACAGCAGTCCCAAGGACACACATTGATGATGAGTACGCAAATGCTTCACAAATTGATCCTAAAATTTTGATTACTAC
ATCTCGGGATCCAAGTGCACCTTTGACCCAGTTTGCAAAGGAATTAAAAATTGTTTTTCCCAATGCACAACGAATGAATCGTGGTGGTCAGGTGATTGCAGAGATTATAG
AGACCTGCCGAGCTCACGAATTTACAGATGTTATATTAGTTCATGAACATCGTGGTGTGCCAGATGGTTTAATTATTAGTCACCTTCCTTTTGGTCCAACTGCATATTTT
GGATTGTTGAATGTGGTTACAAGACATGAAATTAAGGATAAAAAAGCTATGGGAACGATGCCTGAGGCCTATCCACACATAATTTTGAACAATTTTACCACGAAGTTGGG
TGAAAGAACGGCCAATGTCTTAAAGCATCTATTTCCTGTGCCGAAGCCAGATACCAAACGTGTGGTTACTTTTGCTAATCAGTCTGACTATATTTCATTCAGGCATCATA
TTTATGAGAAGCATGGAGGTGCTAAATCAATTGAGCTGAAGGAGATTGGTCCACGGTTTGAATTGCGATTGTACCAGATAAAGTTAGGAACTGTTGACCAAACGGAAGCT
CAGAATGAATGGGTGATTAGACCATACATGAAAACAACCAAGAAACGCCAGTTCCTTGGTGATTGA

mRNA sequence

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Protein sequence

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MIHPSLPSTVAAPCSASRCSPLAARYYNCRYFSDSVTHRPPSFFEFLLFNTLGEDLAAMLRRNIRLRREYLYRKSLEGKERLLYEKKRKIREALEEGKPFPTELRNEEAA
LRKEIELEDDLTAVPRTHIDDEYANASQIDPKILITTSRDPSAPLTQFAKELKIVFPNAQRMNRGGQVIAEIIETCRAHEFTDVILVHEHRGVPDGLIISHLPFGPTAYF
GLLNVVTRHEIKDKKAMGTMPEAYPHIILNNFTTKLGERTANVLKHLFPVPKPDTKRVVTFANQSDYISFRHHIYEKHGGAKSIELKEIGPRFELRLYQIKLGTVDQTEA
QNEWVIRPYMKTTKKRQFLGD

Carg01382 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome