CuGenDBv2

Gene ID	Carg01426
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	protein TIC 40, chloroplastic-like isoform X1
Genome location	Carg_Chr15:4066542..4073139
RNA-Seq Expression	Carg01426
Synteny	Carg01426
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR006636 - Heat shock chaperonin-binding IPR041243 - STI1 domain

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6579066.1 Protein TIC 40, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

6.5e-210

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Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVK ETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVE   NGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

KAG7016592.1 Protein TIC 40, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]

6.8e-215

100

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  VR
        VR
Subjt:  VR

XP_022938458.1 protein TIC 40, chloroplastic-like isoform X1 [Cucurbita moschata]

7.5e-214

99.75

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASA NRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

XP_022938459.1 protein TIC 40, chloroplastic-like isoform X2 [Cucurbita moschata]

3.8e-210

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASA NRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVE   NGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

XP_023550294.1 protein TIC 40, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]

3.2e-209

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Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLA SRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVS PPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNT MSNSTQPFGSPF VPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVK ETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQP VEFPQNGAASKQAFNGSEGSQFSRK GKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CIG9 protein TIC 40, chloroplastic isoform X1

1.4e-189

88.78

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTS PKF+FL YSS SSISTP+RTNQLC +RRL+ SRIK PPRILASA+NRR NHRI+VAERFA+VSSSTTSN+SSSVGVPSVS+PPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQN+ MSN     GSPF +PPTFATGT V+PSVSE AASIDVTATKVE+EPVTNVK  TE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKE+ATD DVSKSAQP+ E PQNGAASKQA+ GS+GSQFSRKPG  LSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWD RLMDSLKNFDLSSPEVKQQFDQIG+TPEEVISK+MANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

A0A6J1FE53 protein TIC 40, chloroplastic-like isoform X2

1.9e-210

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASA NRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVE   NGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

A0A6J1FIY5 protein TIC 40, chloroplastic-like isoform X1

3.6e-214

99.75

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASA NRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

A0A6J1JYZ5 protein TIC 40, chloroplastic-like isoform X2

8.1e-206

97.51

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNT MSNSTQPFGSPF VPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVK ETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQ  VE   NGAASKQAFNGSEGSQFSRK GKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

A0A6J1K0V5 protein TIC 40, chloroplastic-like isoform X1

1.6e-209

98.25

Show/hide

Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
        MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVG

Query:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE
        SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNT MSNSTQPFGSPF VPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVK ETE
Subjt:  SPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETE

Query:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
        NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQ  VEFPQNGAASKQAFNGSEGSQFSRK GKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET
Subjt:  NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPET

Query:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE
        FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSI KYQNDKE
Subjt:  FKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKE

Query:  V
        V
Subjt:  V

SwissProt top hits

e value

%identity

Alignment

Q8GT66 Protein TIC 40, chloroplastic

1.6e-102

55.69

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Query:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILA-SAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYV
        M+ LNLAL SSPK + LG+SS+ ++ +  ++      R  A S   +  R  + S  N +S    V A  FAS+SSS    E++SVGV     PPP S V
Subjt:  MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILA-SAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYV

Query:  GSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAV-------------SPSVSETAASIDVTATK
        GSPLFW+G+GVG SALF+ VAS +KKYAMQQAFK+MM QMN+QN    +     G PF  P   A+G A              + S S++  ++D+ ATK
Subjt:  GSPLFWVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAV-------------SPSVSETAASIDVTATK

Query:  VE---DEPVTNVKRETE-NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVS---KSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMME
        VE     P  NVK E E   E KK AFVDVSPEET QK+ F E   D D S   K A+   E  QNG   KQ F  S  S   RK    LSV+A+EKMME
Subjt:  VE---DEPVTNVKRETE-NMEAKKFAFVDVSPEETDQKSPFKEEATDTDVS---KSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMME

Query:  DPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQ
        DPTVQ+M+YP+LPEEMRNP TFKWMMQNP YRQQLE MLNNM G  +WD R+MD+LKNFDL+SP+VKQQFDQIG++P+EVISK+MANP++AMAFQNPRVQ
Subjt:  DPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQ

Query:  AAIMDCSQNPLSIAKYQNDKEV
        AAIMDCSQNP+SI KYQNDKEV
Subjt:  AAIMDCSQNPLSIAKYQNDKEV

Q9FMD5 Protein TIC 40, chloroplastic

1.3e-99

53.21

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Query:  SSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAER----FASVSSSTTSNESSSVGVPSVSVPPP-SSYVGSPLF
        SSPK + +G + TSS+  PT  ++   +  L  S+I    +  + +    +   IVV ++    FAS+ SS+   +++SV  PSV VPPP SS +GSPLF
Subjt:  SSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAER----FASVSSSTTSNESSSVGVPSVSVPPP-SSYVGSPLF

Query:  WVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSE---TAASIDVTATKVE-------------
        W+GVGVGLSALF++V S LKKYAMQ A KTMM+QMN+QN+Q +NS  P GSPF  P    T  A SP  S+   + A++DVTATKVE             
Subjt:  WVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSE---TAASIDVTATKVE-------------

Query:  ----DEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKE--EATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQF--SRKPGKTLSVEAVEKMMED
            D+P   ++   E  E K +AF D+SPEET ++SPF    E ++T+  K  +   +  QNGA        SE  Q     K G  LSVEA+EKMMED
Subjt:  ----DEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKE--EATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQF--SRKPGKTLSVEAVEKMMED

Query:  PTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQA
        PTVQKM+YP+LPEEMRNPETFKWM++NP YRQQL++MLNNMSGS +WD R+ D+LKNFDL+SPEVKQQF+QIG+TPEEVISK+M NP++AMAFQNPRVQA
Subjt:  PTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQA

Query:  AIMDCSQNPLSIAKYQNDKEV
        A+M+CS+NP++I KYQNDKEV
Subjt:  AIMDCSQNPLSIAKYQNDKEV

Arabidopsis top hits

e value

%identity

Alignment

AT5G16620.1 hydroxyproline-rich glycoprotein family protein

9.1e-101

53.21

Show/hide

Query:  SSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAER----FASVSSSTTSNESSSVGVPSVSVPPP-SSYVGSPLF
        SSPK + +G + TSS+  PT  ++   +  L  S+I    +  + +    +   IVV ++    FAS+ SS+   +++SV  PSV VPPP SS +GSPLF
Subjt:  SSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAER----FASVSSSTTSNESSSVGVPSVSVPPP-SSYVGSPLF

Query:  WVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSE---TAASIDVTATKVE-------------
        W+GVGVGLSALF++V S LKKYAMQ A KTMM+QMN+QN+Q +NS  P GSPF  P    T  A SP  S+   + A++DVTATKVE             
Subjt:  WVGVGVGLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSE---TAASIDVTATKVE-------------

Query:  ----DEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKE--EATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQF--SRKPGKTLSVEAVEKMMED
            D+P   ++   E  E K +AF D+SPEET ++SPF    E ++T+  K  +   +  QNGA        SE  Q     K G  LSVEA+EKMMED
Subjt:  ----DEPVTNVKRETENMEAKKFAFVDVSPEETDQKSPFKE--EATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQF--SRKPGKTLSVEAVEKMMED

Query:  PTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQA
        PTVQKM+YP+LPEEMRNPETFKWM++NP YRQQL++MLNNMSGS +WD R+ D+LKNFDL+SPEVKQQF+QIG+TPEEVISK+M NP++AMAFQNPRVQA
Subjt:  PTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDRLMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQA

Query:  AIMDCSQNPLSIAKYQNDKEV
        A+M+CS+NP++I KYQNDKEV
Subjt:  AIMDCSQNPLSIAKYQNDKEV

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGATAGGCTCAATTTAGCACTAACATCTTCTCCCAAATTTGTTTTCCTCGGATATTCTTCTACTTCTTCTATATCTACTCCCACTAGAACCAATCAATTATGTGGAAG
CAGGCGCTTGGCAAGGTCCAGGATTAAGTATCCTCCCAGAATTCTTGCTTCTGCTGTTAATCGTCGATCCAACCACCGTATCGTCGTGGCTGAACGGTTTGCAAGTGTTT
CTTCTTCGACTACTAGCAATGAATCGTCTTCTGTTGGTGTTCCATCAGTATCTGTTCCTCCTCCCTCCTCATATGTAGGGTCGCCTCTCTTTTGGGTTGGCGTTGGTGTT
GGGCTTTCAGCATTATTTACATGGGTGGCTTCTTATTTAAAGAAATATGCAATGCAACAAGCTTTCAAGACGATGATGTCTCAAATGAATTCTCAAAACACCCAGATGAG
TAATTCTACACAACCATTTGGATCACCTTTTGCAGTACCTCCGACATTTGCGACTGGAACGGCAGTTTCTCCATCTGTTTCTGAAACTGCTGCATCAATTGATGTAACTG
CAACAAAAGTTGAAGATGAGCCAGTTACTAATGTCAAACGTGAGACAGAGAACATGGAAGCAAAGAAGTTTGCTTTTGTAGACGTTTCTCCTGAAGAAACTGACCAAAAG
AGTCCATTCAAAGAAGAAGCCACAGACACCGATGTTTCAAAGAGTGCTCAGCCTTCTGTGGAATTTCCACAGAATGGAGCTGCTTCAAAGCAGGCATTTAACGGTTCAGA
GGGATCACAATTCAGCCGAAAACCTGGCAAAACCTTATCAGTGGAAGCTGTGGAGAAAATGATGGAAGATCCGACAGTGCAAAAGATGATATATCCCCATCTGCCCGAGG
AGATGAGAAATCCAGAAACATTCAAGTGGATGATGCAAAATCCATTATATCGTCAACAATTAGAAGAAATGCTTAACAATATGAGTGGAAGCCCTCAATGGGACGATCGC
CTCATGGATTCTTTGAAAAACTTTGATCTTAGCAGCCCCGAAGTTAAGCAGCAATTTGATCAAATTGGGATGACACCTGAAGAAGTTATTTCAAAAATGATGGCCAATCC
TGAAATCGCAATGGCATTCCAAAATCCAAGAGTTCAAGCAGCCATCATGGATTGTTCACAAAATCCACTGAGCATAGCGAAGTATCAAAATGACAAAGAGGTACGTTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MDRLNLALTSSPKFVFLGYSSTSSISTPTRTNQLCGSRRLARSRIKYPPRILASAVNRRSNHRIVVAERFASVSSSTTSNESSSVGVPSVSVPPPSSYVGSPLFWVGVGV
GLSALFTWVASYLKKYAMQQAFKTMMSQMNSQNTQMSNSTQPFGSPFAVPPTFATGTAVSPSVSETAASIDVTATKVEDEPVTNVKRETENMEAKKFAFVDVSPEETDQK
SPFKEEATDTDVSKSAQPSVEFPQNGAASKQAFNGSEGSQFSRKPGKTLSVEAVEKMMEDPTVQKMIYPHLPEEMRNPETFKWMMQNPLYRQQLEEMLNNMSGSPQWDDR
LMDSLKNFDLSSPEVKQQFDQIGMTPEEVISKMMANPEIAMAFQNPRVQAAIMDCSQNPLSIAKYQNDKEVR

Carg01426 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome