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Carg01429 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01429
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionGRIP and coiled-coil domain-containing protein 1
Genome locationCarg_Chr15:4038833..4042037
RNA-Seq ExpressionCarg01429
SyntenyCarg01429
Gene Ontology termsGO:0006979 - response to oxidative stress (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6579058.1 hypothetical protein SDJN03_23506, partial [Cucurbita argyrosperma subsp. sororia]8.4e-3198.63Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSRSGNEPSGGGFLKAVFRLLKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_008463128.1 PREDICTED: uncharacterized protein LOC103501353 [Cucumis melo]5.6e-2789.04Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSR+G++ SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_022938472.1 uncharacterized protein LOC111444698 [Cucurbita moschata]2.9e-31100Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_022993749.1 uncharacterized protein LOC111489659 [Cucurbita maxima]4.6e-2994.52Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA AGGRSRSGNEPSGGGFLK VFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
XP_023549700.1 uncharacterized protein LOC111808120 [Cucurbita pepo subsp. pepo]3.9e-2894.52Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSRS NE SGGGFLKAVFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
TrEMBL top hitse value%identityAlignment
A0A0A0KPT8 Uncharacterized protein3.0e-2687.67Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GR R+G + SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A1S3CK24 uncharacterized protein LOC1035013532.7e-2789.04Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARA GRSR+G++ SGGGFLKA FR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1CIZ9 uncharacterized protein LOC1110117897.4e-2582.19Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MAR GGRSR+GN+ +  GFLKAV R LKM EFEILF+LFF+VAFI+FKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1FE48 uncharacterized protein LOC1114446981.4e-31100Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
A0A6J1K0Z3 uncharacterized protein LOC1114896592.2e-2994.52Show/hide
Query:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
        MA AGGRSRSGNEPSGGGFLK VFR LKM EFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
Subjt:  MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G14430.1 unknown protein6.9e-1561.11Show/hide
Query:  FLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF
        F+ +VF   ++ EFEILFVLF ++ +++FKDLTSRPEYN+ILV+KP G D+WPF
Subjt:  FLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPF

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCGGGCAGGTGGTCGGAGCAGGAGTGGGAACGAACCGTCGGGGGGAGGGTTTCTTAAGGCGGTTTTCAGATTATTGAAGATGGTGGAGTTTGAGATCCTTTTCGT
TCTCTTCTTCATCGTGGCTTTTATCGTTTTTAAAGATCTCACATCAAGGCCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGTTTTGATATGTGGCCATTCCAGT
AA
mRNA sequenceShow/hide mRNA sequence
AATCGAAATCTGAATAAAATAAACTTCTGAATTTGCTTCGAATTATCTATTGATCGTTGAAGAGAAATCGGTGTTCGTCAAAAGCGGCAGTCGTCGTCGGTGGCGATGGC
TCGGGCAGGTGGTCGGAGCAGGAGTGGGAACGAACCGTCGGGGGGAGGGTTTCTTAAGGCGGTTTTCAGATTATTGAAGATGGTGGAGTTTGAGATCCTTTTCGTTCTCT
TCTTCATCGTGGCTTTTATCGTTTTTAAAGATCTCACATCAAGGCCAGAGTACAATCAGATCCTTGTAAAGAAGCCTGAGGGTTTTGATATGTGGCCATTCCAGTAAATT
CTTGACCTTGCATTCATGTAATCTGAAATATTCACTCCACTTTCTAACTTTGTGTCTTTTTATGATGATGTAAAAATGTTCGTCGATGTAGACGTTACATCTATACTGTC
GTACGTTCGAAAGATTGTAAAGTAAATATTGGTTTTAGAAATGATTTGGA
Protein sequenceShow/hide protein sequence
MARAGGRSRSGNEPSGGGFLKAVFRLLKMVEFEILFVLFFIVAFIVFKDLTSRPEYNQILVKKPEGFDMWPFQ