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Carg01482 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01482
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc finger CCCH domain-containing protein 15 homolog
Genome locationCarg_Chr15:3751689..3752992
RNA-Seq ExpressionCarg01482
SyntenyCarg01482
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0005829 - cytosol (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0062416.1 zinc finger CCCH domain-containing protein 15-like protein isoform X2 [Cucumis melo var. makuwa]2.1e-0781.58Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
KAG7016537.1 hypothetical protein SDJN02_21646, partial [Cucurbita argyrosperma subsp. argyrosperma]8.8e-30100Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIMERNEGTGGLGSDSIQERRNFIENIPEGSRVHL
        MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIMERNEGTGGLGSDSIQERRNFIENIPEGSRVHL
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIMERNEGTGGLGSDSIQERRNFIENIPEGSRVHL
TYK26566.1 zinc finger CCCH domain-containing protein 15-like protein isoform X2 [Cucumis melo var. makuwa]2.1e-0781.58Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
XP_022939418.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita moschata]1.3e-0994.74Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
XP_022992866.1 zinc finger CCCH domain-containing protein 15 homolog [Cucurbita maxima]1.5e-0892.11Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        M AEEAAMEQEKLASRNPRTIPITETQFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
TrEMBL top hitse value%identityAlignment
A0A1S3CCP9 zinc finger CCCH domain-containing protein 15 homolog isoform X25.0e-0778.95Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MG EEAAMEQEKL+  NPRT+PITE QFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
A0A5A7V7M2 Zinc finger CCCH domain-containing protein 15-like protein isoform X21.0e-0781.58Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
A0A5D3DS90 Zinc finger CCCH domain-containing protein 15-like protein isoform X21.0e-0781.58Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKL+  NPRT+PITE QFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
A0A6J1FLL2 zinc finger CCCH domain-containing protein 15 homolog6.4e-1094.74Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
A0A6J1JUQ1 zinc finger CCCH domain-containing protein 15 homolog7.0e-0992.11Show/hide
Query:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
        M AEEAAMEQEKLASRNPRTIPITETQFLSWKRQK  E
Subjt:  MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIME
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGCAGAAGAAGCAGCCATGGAACAAGAGAAGCTCGCATCTCGGAATCCAAGGACGATTCCGATCACAGAGACTCAGTTCCTATCCTGGAAGAGGCAGAAGATTAT
GGAGAGGAATGAGGGGACTGGAGGATTGGGTTCAGACAGTATACAGGAAAGAAGAAACTTCATAGAGAACATTCCTGAAGGCTCAAGAGTCCATTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGCAGAAGAAGCAGCCATGGAACAAGAGAAGCTCGCATCTCGGAATCCAAGGACGATTCCGATCACAGAGACTCAGTTCCTATCCTGGAAGAGGCAGAAGATTAT
GGAGAGGAATGAGGGGACTGGAGGATTGGGTTCAGACAGTATACAGGAAAGAAGAAACTTCATAGAGAACATTCCTGAAGGCTCAAGAGTCCATTTATGACGATCGTTTA
AAGTTGGGGATAGGCAAACTTCTAGTGCAACAAAAAGGAGATTAGCCAAATCTTGAGATTCATGATCATTAAGGGGCTTCTAAAATGAAAAATCATAATCTTTAAGGAGA
GTAGAAGAACTGTGACTATAAGGATTAAAATAGAATGGAAAAGTACCTCATTTTGAAGGGAAAATAAAGTGGGGTAGAACAATTTGGAAAGAATTATTTCCGATCCTGAA
GTCCTACGAGAAATGAACGAGTCCCATTGCCGGTGGAAATTTTAATGAAATTGTTAAGGGGATTATTGAAATTCTGCTAGAAAATACTTGCAATATGTAAGCGGCTATCA
TTAGATTTGGAGGCTATTAATGTTCTAAATCACGTGTTTCAACAATCGACAGTGACACGGAATGCAGGTTCGATTTTGTTCGAGTCAACTGACCTGGAAGGAAACTCAAC
CATTCCACCAGTCTTTTATAAGGCGATTTGTGTGTCACTGAAGTCTGAAGCTAATGAGTTGTTGATGTTTGACATCTATCTCCAACCATCTTCTCTTATTTGCAGGATGC
TGAGGCATCTGCAAAGAGAGATGAAACAGCAAGGAAGCGTGCGGATGATATAGCCTCAGGAGCAGTGCAAATGAATGGGCGAGAGCTTTTCTTGCACCAACCATGGGTTT
TTGATAATTCTCAATATTGAGGTTGGTTTTAGATGGAAACATTGTGGTGCTACGCTTTGTGGTCTCTTGAGATATTGGTCTTTTACTTTAAAAT
Protein sequenceShow/hide protein sequence
MGAEEAAMEQEKLASRNPRTIPITETQFLSWKRQKIMERNEGTGGLGSDSIQERRNFIENIPEGSRVHL