CuGenDBv2

Gene ID	Carg01533
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	zinc_ribbon_15 domain-containing protein
Genome location	Carg_Chr15:3459735..3460073
RNA-Seq Expression	Carg01533
Synteny	Carg01533
Gene Ontology terms	NA
InterPro domains	IPR031493 - Zinc-ribbon 15

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6578964.1 hypothetical protein SDJN03_23412, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-62

99.11

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKSGAGRC+NCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        NFSFCPFCGSSL
Subjt:  NFSFCPFCGSSL

KAG7016486.1 hypothetical protein SDJN02_21595, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.7e-62

100

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        NFSFCPFCGSSL
Subjt:  NFSFCPFCGSSL

XP_022939102.1 uncharacterized protein LOC111445104 [Cucurbita moschata]

1.0e-59

96.43

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKS AGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFP SFSPPPISDQSTPPA  SRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        NFSFCPFCGSSL
Subjt:  NFSFCPFCGSSL

XP_022992997.1 uncharacterized protein LOC111489157 [Cucurbita maxima]

1.7e-59

95.54

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKS AGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFP+SFSPPPISDQSTPPA LSRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCPFCG SL
Subjt:  NFSFCPFCGSSL

XP_038884584.1 uncharacterized protein LOC120075351 [Benincasa hispida]

2.2e-54

86.61

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGL+QQVRQ++KS AGRCINCNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQSFSPPPISDQS P A L R L CRSCN+VVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCP+CGSSL
Subjt:  NFSFCPFCGSSL

TrEMBL top hits

e value

%identity

Alignment

A0A1S3CRV3 uncharacterized protein LOC103504060

8.9e-54

89.29

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKSGA RCINC+SPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQS SPP  SDQS P A LSR LRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCP+CGSSL
Subjt:  NFSFCPFCGSSL

A0A5A7V2D0 zinc_ribbon_15 domain-containing protein

8.9e-54

89.29

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKSGA RCINC+SPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNC LFFPQS SPP  SDQS P A LSR LRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCP+CGSSL
Subjt:  NFSFCPFCGSSL

A0A6J1FFV9 uncharacterized protein LOC111445104

4.9e-60

96.43

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKS AGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFP SFSPPPISDQSTPPA  SRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        NFSFCPFCGSSL
Subjt:  NFSFCPFCGSSL

A0A6J1HEV4 uncharacterized protein LOC111462885

3.1e-54

87.5

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVR LLK+GAGRCI+CNSPADLV+YEKVLKLFFVPVWRWPGKEPLMHCNNC LFFP+SFSPPPISDQ  P A L R LRC SCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCPFCGSSL
Subjt:  NFSFCPFCGSSL

A0A6J1JRI4 uncharacterized protein LOC111489157

8.3e-60

95.54

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGLEQQVRQLLKS AGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFP+SFSPPPISDQSTPPA LSRTLRCRSCNKVVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
        +FSFCPFCG SL
Subjt:  NFSFCPFCGSSL

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT1G44414.1 unknown protein

8.3e-44

68.75

Show/hide

Query:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP
        MFFFFVGGL QQVRQ+LKSGAG CI C S ADLV Y+KV+KLFFVPVWRWPGK+PL+HC +C+LFFPQS SPPP+S              CR C++VVEP
Subjt:  MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEP

Query:  NFSFCPFCGSSL
         F FCPFCGSSL
Subjt:  NFSFCPFCGSSL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTTCTTCTTCTTCGTCGGGGGTTTGGAGCAACAAGTTCGCCAGCTCCTCAAATCCGGCGCCGGCCGGTGCATAAACTGTAACTCGCCGGCCGATCTCGTTAACTACGA
GAAAGTTCTGAAGCTCTTCTTTGTTCCGGTGTGGCGGTGGCCGGGAAAAGAGCCACTGATGCACTGCAACAACTGTAATCTCTTTTTTCCTCAGTCGTTCTCTCCGCCGC
CAATTTCCGATCAATCGACGCCACCAGCCACTCTTTCAAGGACCCTTCGTTGCCGTTCATGTAACAAAGTAGTGGAGCCCAACTTCAGTTTCTGCCCTTTCTGTGGTTCT
TCCTTGTAA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MFFFFVGGLEQQVRQLLKSGAGRCINCNSPADLVNYEKVLKLFFVPVWRWPGKEPLMHCNNCNLFFPQSFSPPPISDQSTPPATLSRTLRCRSCNKVVEPNFSFCPFCGS
SL

Carg01533 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome