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Carg01545 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01545
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionE3 ubiquitin ligase BIG BROTHER-related-like
Genome locationCarg_Chr15:3387590..3387892
RNA-Seq ExpressionCarg01545
SyntenyCarg01545
Gene Ontology termsGO:0051603 - proteolysis involved in cellular protein catabolic process (biological process)
GO:0005839 - proteasome core complex (cellular component)
GO:0140096 - catalytic activity, acting on a protein (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578952.1 Proteasome subunit beta type-3-A, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4091Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF
        MALAMQQQEHEMPYTTLGTIES        D DEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF

KAG7016474.1 hypothetical protein SDJN02_21583, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-46100Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF
        MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF

XP_004149804.1 E3 ubiquitin ligase BIG BROTHER-related [Cucumis sativus]3.7e-0533.33Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNAS-------------------------------------------------
        MALAMQQQEHE+ YTTL TI SD +EDE+        SDSNSNNGLDTNA+                                                 
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNAS-------------------------------------------------

Query:  ----------------------------------------FQVEYEDSEELAALPCEHPYHS
                                                 QVEY+D EELAALPCEHPYHS
Subjt:  ----------------------------------------FQVEYEDSEELAALPCEHPYHS

XP_022993933.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita maxima]2.9e-1039.35Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------
        MALAMQQQEHEM YTTLGTIES        D DEDERSDSNSNNGLDTNAS                                                 
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------

Query:  ----------------------------------QVEYEDSEELAALPCEHPYHS
                                          QVEYED EELAALPCEHPYHS
Subjt:  ----------------------------------QVEYEDSEELAALPCEHPYHS

XP_023551485.1 E3 ubiquitin ligase BIG BROTHER-related-like [Cucurbita pepo subsp. pepo]4.5e-1140.26Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------
        MALAMQQQEHEM YTTLGTIES      D DEDEDERSDSNSNNGLDTNAS                                                 
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------

Query:  ---------------------------------QVEYEDSEELAALPCEHPYHS
                                         QVEYED E+LAALPCEHPYHS
Subjt:  ---------------------------------QVEYEDSEELAALPCEHPYHS

TrEMBL top hitse value%identityAlignment
A0A0A0KFS4 RING-type domain-containing protein1.8e-0533.33Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNAS-------------------------------------------------
        MALAMQQQEHE+ YTTL TI SD +EDE+        SDSNSNNGLDTNA+                                                 
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNAS-------------------------------------------------

Query:  ----------------------------------------FQVEYEDSEELAALPCEHPYHS
                                                 QVEY+D EELAALPCEHPYHS
Subjt:  ----------------------------------------FQVEYEDSEELAALPCEHPYHS

A0A1S3CT85 E3 ubiquitin ligase BIG BROTHER-related-like1.5e-0465.45Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVE
        MALAMQQQEHEM YTTL TI S+ +EDE         SDSNSNNGL+TNA+ Q E
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVE

A0A5D3CF09 E3 ubiquitin ligase BIG BROTHER-related-like1.5e-0465.45Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVE
        MALAMQQQEHEM YTTL TI S+ +EDE         SDSNSNNGL+TNA+ Q E
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVE

A0A6J1CJH0 E3 ubiquitin ligase BIG BROTHER-related2.6e-0434.64Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDE---------------------------------------DEDEDEDERSDSN--------------------
        MALAMQQQEHE  YT L TIESD DEDE                                       DED DEDE  D +                    
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDE---------------------------------------DEDEDEDERSDSN--------------------

Query:  ---------------------SNNGLDTNASFQVEYEDSEELAALPCEHPYHS
                             + +G+D     QVEYED EELAALPCEHPYHS
Subjt:  ---------------------SNNGLDTNASFQVEYEDSEELAALPCEHPYHS

A0A6J1K3Q9 E3 ubiquitin ligase BIG BROTHER-related-like1.4e-1039.35Show/hide
Query:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------
        MALAMQQQEHEM YTTLGTIES        D DEDERSDSNSNNGLDTNAS                                                 
Subjt:  MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASF------------------------------------------------

Query:  ----------------------------------QVEYEDSEELAALPCEHPYHS
                                          QVEYED EELAALPCEHPYHS
Subjt:  ----------------------------------QVEYEDSEELAALPCEHPYHS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGACGAAGACGAAGACGAAGACGAAGACGAAGACGAAGACGAAAG
GTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAT
TCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCTTGGCAATGCAGCAGCAGGAGCATGAGATGCCCTATACGACGCTTGGGACCATCGAAAGTGACGAAGACGAAGACGAAGACGAAGACGAAGACGAAGACGAAAG
GTCTGATTCCAATAGCAACAATGGTCTCGACACCAATGCCTCCTTCCAAGTTGAATATGAGGATAGTGAAGAATTGGCTGCCCTTCCTTGTGAGCATCCTTACCATTCAT
TCAGAGTGTATAGTAAAATGGGTTCAAATCAAAAGGGTTTGTCCAATATGTGGCACAGAAGTTTCATCCCCCAAGCCTTCTAA
Protein sequenceShow/hide protein sequence
MALAMQQQEHEMPYTTLGTIESDEDEDEDEDEDEDERSDSNSNNGLDTNASFQVEYEDSEELAALPCEHPYHSFRVYSKMGSNQKGLSNMWHRSFIPQAF