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Carg01558 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01558
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr15:3318001..3318818
RNA-Seq ExpressionCarg01558
SyntenyCarg01558
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016461.1 hypothetical protein SDJN02_21570, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-52100Show/hide
Query:  MIIPRALVALQDFIFSNKECATLNSGADLTSRVPVCRLPSPCPLSHTFSENEPENNRERDIYQPQFDVQLTNTTVEILFRLSISLSFDLVSIGKRLCPSV
        MIIPRALVALQDFIFSNKECATLNSGADLTSRVPVCRLPSPCPLSHTFSENEPENNRERDIYQPQFDVQLTNTTVEILFRLSISLSFDLVSIGKRLCPSV
Subjt:  MIIPRALVALQDFIFSNKECATLNSGADLTSRVPVCRLPSPCPLSHTFSENEPENNRERDIYQPQFDVQLTNTTVEILFRLSISLSFDLVSIGKRLCPSV

Query:  FASSCSVL
        FASSCSVL
Subjt:  FASSCSVL
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATCATTCCACGAGCATTAGTAGCGTTACAGGATTTCATATTTTCAAACAAAGAATGCGCAACTTTGAACTCGGGTGCGGACCTAACCAGCCGAGTACCCGTCTGTCG
CCTTCCCTCCCCTTGCCCATTGTCTCACACCTTCTCTGAGAACGAACCAGAAAACAACAGAGAGCGAGACATTTATCAGCCTCAGTTCGATGTGCAGTTAACGAACACCA
CCGTCGAAATTCTCTTCCGCCTCTCAATTTCCCTCTCATTCGATTTGGTTTCCATCGGCAAACGGTTATGTCCCTCCGTTTTTGCTTCCAGCTGTTCGGTTCTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGATCATTCCACGAGCATTAGTAGCGTTACAGGATTTCATATTTTCAAACAAAGAATGCGCAACTTTGAACTCGGGTGCGGACCTAACCAGCCGAGTACCCGTCTGTCG
CCTTCCCTCCCCTTGCCCATTGTCTCACACCTTCTCTGAGAACGAACCAGAAAACAACAGAGAGCGAGACATTTATCAGCCTCAGTTCGATGTGCAGTTAACGAACACCA
CCGTCGAAATTCTCTTCCGCCTCTCAATTTCCCTCTCATTCGATTTGGTTTCCATCGGCAAACGGTTATGTCCCTCCGTTTTTGCTTCCAGCTGTTCGGTTCTTTAA
Protein sequenceShow/hide protein sequence
MIIPRALVALQDFIFSNKECATLNSGADLTSRVPVCRLPSPCPLSHTFSENEPENNRERDIYQPQFDVQLTNTTVEILFRLSISLSFDLVSIGKRLCPSVFASSCSVL