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Carg01590 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01590
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein MKS1-like
Genome locationCarg_Chr15:3138983..3139474
RNA-Seq ExpressionCarg01590
SyntenyCarg01590
Gene Ontology termsGO:0005634 - nucleus (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008889 - VQ
IPR039607 - VQ motif-containing protein 8/17/18/20/21/25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578908.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia]7.5e-88100Show/hide
Query:  MSSSLCSSTPNAMAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERV
        MSSSLCSSTPNAMAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERV
Subjt:  MSSSLCSSTPNAMAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERV

Query:  GHGILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLHN
        GHGILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLHN
Subjt:  GHGILSPTPGLLPPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLHN

XP_022939148.1 protein MKS1-like [Cucurbita moschata]1.7e-7998.67Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL
        MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQG ERVGHGILSPTPGLL
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL

Query:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
        PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFS SLDFFQNFPDLH
Subjt:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH

XP_022993351.1 protein MKS1-like [Cucurbita maxima]2.0e-7796.67Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL
        MAERKE+QLQGPRPAALKITKDSHKIGKPPHRPVIIY+VSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTN  GAERVGHGILSPTPGLL
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL

Query:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
        PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFS SLDFFQNFPDLH
Subjt:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH

XP_023551504.1 protein MKS1-like [Cucurbita pepo subsp. pepo]6.3e-7998Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL
        MAERKE+QLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHH PNTTMIMSTNHQGAERVGHGILSPTPGLL
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL

Query:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
        PPIP NIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
Subjt:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH

XP_038885910.1 protein MKS1-like [Benincasa hispida]1.1e-4968.64Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGK--------PPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDS--HHPPNTTMIMSTN--HQGAERV
        M ERKE+ LQGPRPAALKITKDSHKI K        PPHRPVIIYTVSPK+IHT+PT+FKDLVQRLTG +PSS +    HP + +M M+TN   QG ERV
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGK--------PPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDS--HHPPNTTMIMSTN--HQGAERV

Query:  GHGILSPTPGLLPPIPANIFTPTPPQSA------ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH
        GHGILSPTPGLLPPI +NIFTP PPQ+A      + SP T FF+D SPIA N FSSSLDFF QNFPD H
Subjt:  GHGILSPTPGLLPPIPANIFTPTPPQSA------ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH

TrEMBL top hitse value%identityAlignment
A0A0A0KI80 VQ domain-containing protein1.7e-4563.48Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSS-------HDSHHPPNTTMIMST-----
        M E+KELQLQGPRP+ALKITKDSHKI KP      PHRPVIIYTVSPK+IHTDPT+FKDLVQRLTGH   PSS       HD H PP+   I +T     
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSS-------HDSHHPPNTTMIMST-----

Query:  NHQGAER-VGHGILSPTPGLLPPIPANIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH
        +  G +R + HGILSPTPGLLPPI + IF P PPQ      + +L+ LT FF DLSPIA N FSSSLDFF QNFPD H
Subjt:  NHQGAER-VGHGILSPTPGLLPPIPANIFTPTPPQ------SAELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH

A0A1S3B4N1 protein MKS1-like3.0e-4260.92Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSSHDSH-----HPP------NTTMIMSTNHQ
        ++++LQLQGPRP+ALKITKDSHKI KP      PHRPVIIYTVSPK+IHTDPTQFKDLVQRLTGH   PSS  +H     HPP        T  +     
Subjt:  ERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSSHDSH-----HPP------NTTMIMSTNHQ

Query:  GAER-VGHGILSPTPGLLPPIPANIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH
        G +R + HGILSPTPGLLPPI   IF+  PPQ+A     +L+ LT FF DLSPI  N FS SLDFF QNFPD H
Subjt:  GAER-VGHGILSPTPGLLPPIPANIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH

A0A5A7UZA1 Protein MKS1-like5.5e-4462.5Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSSHDSH-----HPP------NTTMIMSTN
        M E+KELQLQGPRP+ALKITKDSHKI KP      PHRPVIIYTVSPK+IHTDPTQFKDLVQRLTGH   PSS  +H     HPP        T  +   
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKP------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH--KPSSHDSH-----HPP------NTTMIMSTN

Query:  HQGAER-VGHGILSPTPGLLPPIPANIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH
          G +R + HGILSPTPGLLPPI   IF+  PPQ+A     +L+ LT FF DLSPI  N FS SLDFF QNFPD H
Subjt:  HQGAER-VGHGILSPTPGLLPPIPANIFTPTPPQSA-----ELSPLTHFFRDLSPIAPNRFSSSLDFF-QNFPDLH

A0A6J1FKV1 protein MKS1-like8.1e-8098.67Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL
        MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQG ERVGHGILSPTPGLL
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL

Query:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
        PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFS SLDFFQNFPDLH
Subjt:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH

A0A6J1JW33 protein MKS1-like9.9e-7896.67Show/hide
Query:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL
        MAERKE+QLQGPRPAALKITKDSHKIGKPPHRPVIIY+VSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTN  GAERVGHGILSPTPGLL
Subjt:  MAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLL

Query:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH
        PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFS SLDFFQNFPDLH
Subjt:  PPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLH

SwissProt top hitse value%identityAlignment
F4HWF9 Nuclear speckle RNA-binding protein B2.1e-0833.33Show/hide
Query:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIM
        GP+P  LK+  DSHKI                          +PP  PV IYTV+P++IHT P  F  LVQRLTG          SS  +  P +T+ ++
Subjt:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIM

Query:  STNHQGAERVGHGILSPTPGLLPPIPANI
         T+        HG++SP         ANI
Subjt:  STNHQGAERVGHGILSPTPGLLPPIPANI

Q8LGD5 Protein MKS18.2e-1333.14Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIGKP-----------------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLT--------------------------
        ++++LQ+ GPRP+ L + KDSHKI KP                 P  PV+IY VSPKV+H   ++F ++VQRLT                          
Subjt:  ERKELQLQGPRPAALKITKDSHKIGKP-----------------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLT--------------------------

Query:  ------GHKPSSHDSHHPPNTTMIMSTNHQGAERVGH--GILSPTPGLLPPIPANIFTPTPPQSAELSP
              G +P++ D     NT M      + AE  G+  GILSP+P LLP     IF+P   Q    SP
Subjt:  ------GHKPSSHDSHHPPNTTMIMSTNHQGAERVGH--GILSPTPGLLPPIPANIFTPTPPQSAELSP

Q9CA36 VQ motif-containing protein 8, chloroplastic9.7e-0648.44Show/hide
Query:  QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYTVSPKVIHTDPTQFKDLVQRLTG
        ++ G RP++LK+  +SH I K         PH    PVIIY  SPKVIHT    F  LVQRLTG
Subjt:  QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYTVSPKVIHTDPTQFKDLVQRLTG

Q9LS54 VQ motif-containing protein 204.7e-0847.76Show/hide
Query:  PRPAALKITKDSHKIGKP-----------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHD
        P P  LK+ KDSH I KP           P  PVIIYT +P++IHT+P  F  LVQ+LTG   S  D
Subjt:  PRPAALKITKDSHKIGKP-----------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHD

Arabidopsis top hitse value%identityAlignment
AT1G21320.1 nucleotide binding;nucleic acid binding1.5e-0933.33Show/hide
Query:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIM
        GP+P  LK+  DSHKI                          +PP  PV IYTV+P++IHT P  F  LVQRLTG          SS  +  P +T+ ++
Subjt:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGH-------KPSSHDSHHPPNTTMIM

Query:  STNHQGAERVGHGILSPTPGLLPPIPANI
         T+        HG++SP         ANI
Subjt:  STNHQGAERVGHGILSPTPGLLPPIPANI

AT1G21326.1 VQ motif-containing protein2.1e-1129.44Show/hide
Query:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHH-------PPNTTMIM
        GPRP  LK+  DSHKI                          +PP  PVIIYTVSP++IHT P  F  LVQRLTG   +S  S         P + + ++
Subjt:  GPRPAALKITKDSHKI-------------------------GKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHH-------PPNTTMIM

Query:  STNH--------------------------------------------------QGAERVGH---GILSPTPGLLPPIPANIFT---PTPPQSAELSPLT
         T+H                                                  QG ER      GILSP P  LP +  + F+   PT PQ       +
Subjt:  STNH--------------------------------------------------QGAERVGH---GILSPTPGLLPPIPANIFT---PTPPQSAELSPLT

Query:  HFFRDLSPI---APNRFS--SSLDFFQNFPD
         FF D + I   +P++    SS+D F NF D
Subjt:  HFFRDLSPI---APNRFS--SSLDFFQNFPD

AT1G68450.1 VQ motif-containing protein6.9e-0748.44Show/hide
Query:  QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYTVSPKVIHTDPTQFKDLVQRLTG
        ++ G RP++LK+  +SH I K         PH    PVIIY  SPKVIHT    F  LVQRLTG
Subjt:  QLQGPRPAALKITKDSHKIGKP--------PH---RPVIIYTVSPKVIHTDPTQFKDLVQRLTG

AT3G18360.1 VQ motif-containing protein3.3e-0947.76Show/hide
Query:  PRPAALKITKDSHKIGKP-----------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHD
        P P  LK+ KDSH I KP           P  PVIIYT +P++IHT+P  F  LVQ+LTG   S  D
Subjt:  PRPAALKITKDSHKIGKP-----------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHD

AT3G18690.1 MAP kinase substrate 15.8e-1433.14Show/hide
Query:  ERKELQLQGPRPAALKITKDSHKIGKP-----------------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLT--------------------------
        ++++LQ+ GPRP+ L + KDSHKI KP                 P  PV+IY VSPKV+H   ++F ++VQRLT                          
Subjt:  ERKELQLQGPRPAALKITKDSHKIGKP-----------------PHRPVIIYTVSPKVIHTDPTQFKDLVQRLT--------------------------

Query:  ------GHKPSSHDSHHPPNTTMIMSTNHQGAERVGH--GILSPTPGLLPPIPANIFTPTPPQSAELSP
              G +P++ D     NT M      + AE  G+  GILSP+P LLP     IF+P   Q    SP
Subjt:  ------GHKPSSHDSHHPPNTTMIMSTNHQGAERVGH--GILSPTPGLLPPIPANIFTPTPPQSAELSP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCTCTTTGTTCTTCAACACCTAATGCCATGGCTGAAAGAAAAGAGCTTCAACTCCAAGGTCCCCGTCCCGCTGCCCTCAAGATCACCAAAGACTCCCACAA
GATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACA
AACCCTCCTCCCATGACTCTCACCATCCACCCAATACGACGATGATTATGAGTACCAATCATCAAGGAGCAGAGAGGGTAGGTCACGGAATATTATCGCCAACGCCAGGG
TTGCTGCCGCCGATTCCAGCGAATATTTTCACTCCGACGCCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCAAATCG
ATTCTCGTCGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTGCATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCTCTTTGTTCTTCAACACCTAATGCCATGGCTGAAAGAAAAGAGCTTCAACTCCAAGGTCCCCGTCCCGCTGCCCTCAAGATCACCAAAGACTCCCACAA
GATCGGCAAGCCGCCGCACCGGCCCGTCATCATCTACACCGTCTCCCCCAAGGTCATCCACACCGACCCTACTCAATTCAAGGACTTGGTCCAGCGTCTCACTGGCCACA
AACCCTCCTCCCATGACTCTCACCATCCACCCAATACGACGATGATTATGAGTACCAATCATCAAGGAGCAGAGAGGGTAGGTCACGGAATATTATCGCCAACGCCAGGG
TTGCTGCCGCCGATTCCAGCGAATATTTTCACTCCGACGCCGCCGCAGTCAGCTGAGCTCAGCCCTCTTACCCACTTTTTTCGGGATCTTAGCCCCATAGCTCCAAATCG
ATTCTCGTCGTCGCTAGATTTCTTCCAAAACTTCCCTGATTTGCATAATTAA
Protein sequenceShow/hide protein sequence
MSSSLCSSTPNAMAERKELQLQGPRPAALKITKDSHKIGKPPHRPVIIYTVSPKVIHTDPTQFKDLVQRLTGHKPSSHDSHHPPNTTMIMSTNHQGAERVGHGILSPTPG
LLPPIPANIFTPTPPQSAELSPLTHFFRDLSPIAPNRFSSSLDFFQNFPDLHN