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Carg01663 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01663
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionSHSP domain-containing protein
Genome locationCarg_Chr15:2698111..2698598
RNA-Seq ExpressionCarg01663
SyntenyCarg01663
Gene Ontology termsNA
InterPro domainsIPR002068 - Alpha crystallin/Hsp20 domain
IPR008978 - HSP20-like chaperone


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646641.1 hypothetical protein Csa_005322 [Cucumis sativus]9.3e-2356.88Show/hide
Query:  MSSQIVEQDWRD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHT
        MSSQIV QDWR+ VT+ +Q F P   +  +EE++    SMKLPGF K+RL+I LN  TR + VTGQK DGLFNI RLNER++I + C L+GV A+L + T
Subjt:  MSSQIVEQDWRD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHT

Query:  LFVTFSKKK
        L VTF K+K
Subjt:  LFVTFSKKK

KAG6578833.1 Chlorophyll(ide) b reductase NOL, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]1.1e-28100Show/hide
Query:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQD
        MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQD
Subjt:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQD

KAG7016359.1 hypothetical protein SDJN02_21467 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-53100Show/hide
Query:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV
        MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV
Subjt:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

XP_018442964.1 PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Raphanus sativus]1.2e-0636.56Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK
        TRS Q F P T+W  E  + IL + LPGF K ++++ +   TR L +TG++  G    IR  + + I  T  +D V A   D+ L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK

XP_022939359.1 uncharacterized protein LOC111445297 [Cucurbita moschata]1.1e-5097.17Show/hide
Query:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV
        MSSQIVEQDW DVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKN+LQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHD TLFV
Subjt:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

TrEMBL top hitse value%identityAlignment
A0A0A0KB53 SHSP domain-containing protein4.5e-2356.88Show/hide
Query:  MSSQIVEQDWRD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHT
        MSSQIV QDWR+ VT+ +Q F P   +  +EE++    SMKLPGF K+RL+I LN  TR + VTGQK DGLFNI RLNER++I + C L+GV A+L + T
Subjt:  MSSQIVEQDWRD-VTRSDQPFSPDTKW--AEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHT

Query:  LFVTFSKKK
        L VTF K+K
Subjt:  LFVTFSKKK

A0A397XKR4 SHSP domain-containing protein1.3e-0636.56Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK
        TR  Q F P T+W  E  + IL + LPGF K ++++ +   TR L +TG++  G    IR    I+I  T  +D V A   D+ L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK

A0A3P6EPU1 SHSP domain-containing protein1.7e-0635.48Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK
        TR  Q F P T+W  E  + IL + LPGF K ++++ +   TR L +TG++  G    IR    I++  T  +D V A   D+ L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK

A0A6J0K7J7 inactive protein RESTRICTED TEV MOVEMENT 2-like5.9e-0736.56Show/hide
Query:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK
        TRS Q F P T+W  E  + IL + LPGF K ++++ +   TR L +TG++  G    IR  + + I  T  +D V A   D+ L++  SK K
Subjt:  TRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK

A0A6J1FGX8 uncharacterized protein LOC1114452975.1e-5197.17Show/hide
Query:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV
        MSSQIVEQDW DVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKN+LQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHD TLFV
Subjt:  MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFV

Query:  TFSKKK
        TFSKKK
Subjt:  TFSKKK

SwissProt top hitse value%identityAlignment
D5K211 Inactive protein RESTRICTED TEV MOVEMENT 25.3e-0523.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +     ++ L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

D9UBX4 Inactive protein RESTRICTED TEV MOVEMENT 24.1e-0523.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +     ++ L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

D9UBX6 Inactive protein RESTRICTED TEV MOVEMENT 24.1e-0523.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +     ++ L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

D9UC01 Inactive protein RESTRICTED TEV MOVEMENT 29.1e-0523.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +      + L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

Q9M670 Protein RESTRICTED TEV MOVEMENT 24.1e-0523.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +     ++ L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

Arabidopsis top hitse value%identityAlignment
AT3G10680.1 HSP20-like chaperones superfamily protein7.2e-0529.85Show/hide
Query:  FSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSL
        F P  +W     S  L + LPGF +++++I  +  TRT+ + GQ+        R +E   + DTC +
Subjt:  FSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSL

AT5G04890.1 HSP20-like chaperones superfamily protein2.9e-0623.86Show/hide
Query:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK
        + F P ++W ++  + IL++ L GF K ++++T   +++ + VTG++        R NE  ++   C +D +     ++ L +T  K+
Subjt:  QPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKK

AT5G20970.1 HSP20-like chaperones superfamily protein5.7e-1034.04Show/hide
Query:  VTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK
        + R  Q F P T+W  E  + +L   LPGF K +L++++  ATR L +TG++  G    IR ++ I +  T  +D V A   D+ L++   K K
Subjt:  VTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGAGCCAGATCGTGGAACAAGATTGGAGAGACGTAACTCGCTCAGATCAACCGTTTTCTCCCGATACAAAATGGGCAGAAGAGGAACACAGTCGAATACTGAGCAT
GAAACTTCCAGGGTTTCCAAAGAATCGACTACAAATCACCTTGAATGCAGCAACAAGGACTCTTACCGTTACTGGACAAAAACAAGATGGTCTATTCAACATTATTCGTT
TGAACGAACGTATATCGATCGACGACACATGCTCCCTAGACGGAGTATTTGCAAGATTGCATGATCATACTCTTTTTGTTACCTTTTCCAAGAAGAAATAA
mRNA sequenceShow/hide mRNA sequence
AAAGAGAAAATTACCATTTTACCCTTCTCCTCGAATTTTTCCACCTCTTCGAACGTAAGCCGTAAAGCTCTTTCGATGTCGAGCCAGATCGTGGAACAAGATTGGAGAGA
CGTAACTCGCTCAGATCAACCGTTTTCTCCCGATACAAAATGGGCAGAAGAGGAACACAGTCGAATACTGAGCATGAAACTTCCAGGGTTTCCAAAGAATCGACTACAAA
TCACCTTGAATGCAGCAACAAGGACTCTTACCGTTACTGGACAAAAACAAGATGGTCTATTCAACATTATTCGTTTGAACGAACGTATATCGATCGACGACACATGCTCC
CTAGACGGAGTATTTGCAAGATTGCATGATCATACTCTTTTTGTTACCTTTTCCAAGAAGAAATAA
Protein sequenceShow/hide protein sequence
MSSQIVEQDWRDVTRSDQPFSPDTKWAEEEHSRILSMKLPGFPKNRLQITLNAATRTLTVTGQKQDGLFNIIRLNERISIDDTCSLDGVFARLHDHTLFVTFSKKK