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Carg01677 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01677
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description40S ribosomal protein S25
Genome locationCarg_Chr15:2610099..2611509
RNA-Seq ExpressionCarg01677
SyntenyCarg01677
Gene Ontology termsGO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR004977 - Ribosomal protein S25


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ABK21138.1 unknown [Picea sitchensis]1.4e-4595.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPK+KL+TPSILSDRLRINGSLAR+AIKDLMARGSIRMIS+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

RWR82322.1 40S ribosomal protein S25-3 [Cinnamomum micranthum f. kanehirae]1.8e-4595.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKP KSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLL+EAPK+KL+TPSILSDRLRINGSLARRAIKDLMARGSIRMIS+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

XP_006424223.1 40S ribosomal protein S25-3 [Citrus clementina]1.4e-4595.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIRMIS+H+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

XP_008442240.1 PREDICTED: 40S ribosomal protein S25-2 [Cucumis melo]1.8e-4595.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIR+IS+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

XP_022938725.1 40S ribosomal protein S25-3 [Cucurbita moschata]1.5e-47100Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATNA
        IYTRATNA
Subjt:  IYTRATNA

TrEMBL top hitse value%identityAlignment
A0A067ESG8 40S ribosomal protein S256.6e-4695.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIRMIS+H+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

A0A6J1FKK8 40S ribosomal protein S257.1e-48100Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATNA
        IYTRATNA
Subjt:  IYTRATNA

A0A6J1JTT0 40S ribosomal protein S257.1e-48100Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATNA
        IYTRATNA
Subjt:  IYTRATNA

A9NKH7 40S ribosomal protein S256.6e-4695.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPK+KL+TPSILSDRLRINGSLAR+AIKDLMARGSIRMIS+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

V4RSB2 40S ribosomal protein S256.6e-4695.33Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDKAPPP+SKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAIKDLMARGSIRMIS+H+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

SwissProt top hitse value%identityAlignment
P46301 40S ribosomal protein S259.2e-4586.92Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKK +APPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFD+++YDKLLSEAPK+KL+TPS+LSDRLRI+GSLAR+AI+DLMARGSIRM+S+H+SQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

Q8GYL5 40S ribosomal protein S25-31.7e-4690.65Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAI++LMA+G+IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

Q9SIK2 40S ribosomal protein S25-21.1e-4588.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

Q9SIW5 40S ribosomal protein S25-19.2e-4588.68Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKL+SEAPKFKL+TPSILSDRLRINGSLAR+AI+DLM +G+IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRAT
        I TRAT
Subjt:  IYTRAT

Q9T029 40S ribosomal protein S25-48.3e-4688.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+++HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

Arabidopsis top hitse value%identityAlignment
AT2G21580.1 Ribosomal protein S25 family protein7.7e-4788.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

AT2G21580.2 Ribosomal protein S25 family protein5.5e-4587.85Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQ +YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

AT4G34555.1 Ribosomal protein S25 family protein1.2e-4790.65Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLLSEAPKFKL+TPSILSDRLRINGSLARRAI++LMA+G+IRM+S+HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRAT+
Subjt:  IYTRATN

AT4G39200.1 Ribosomal protein S25 family protein5.9e-4788.79Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQA+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+++HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN

AT4G39200.2 Ribosomal protein S25 family protein4.2e-4587.85Show/hide
Query:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ
        MAPKKDK PPPSSKPAKSGGGKQ KKKWSKGKQKEKVNNMVLFDQA+YDKLL+EAPKFKL+TPSILSDR+RINGSLARRAI++LMA+G IRM+++HSSQQ
Subjt:  MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQ

Query:  IYTRATN
        IYTRATN
Subjt:  IYTRATN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCACCAAAGAAGGATAAGGCTCCTCCACCGTCCTCCAAGCCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAAGGCAAGCAAAAGGAGAAGGT
GAACAACATGGTTTTATTTGATCAGGCAAGTTATGATAAGCTCCTTTCTGAAGCTCCCAAGTTCAAGCTGGTCACTCCGTCTATCCTTTCTGATAGGTTGAGGATCAATG
GGTCGCTCGCACGAAGAGCAATTAAGGATTTGATGGCACGGGGTTCCATCAGGATGATATCGTCTCACTCCAGTCAGCAGATCTATACAAGAGCAACCAACGCCTAA
mRNA sequenceShow/hide mRNA sequence
ATTCCCTCCTTTCTATTCCGATCGAAACCTCTGCAACTCGTTCCCTCAAACCCTAGAAATCAAATCTCATGGCACCAAAGAAGGATAAGGCTCCTCCACCGTCCTCCAAG
CCCGCTAAATCTGGTGGAGGAAAGCAGAAGAAGAAGAAATGGAGCAAAGGCAAGCAAAAGGAGAAGGTGAACAACATGGTTTTATTTGATCAGGCAAGTTATGATAAGCT
CCTTTCTGAAGCTCCCAAGTTCAAGCTGGTCACTCCGTCTATCCTTTCTGATAGGTTGAGGATCAATGGGTCGCTCGCACGAAGAGCAATTAAGGATTTGATGGCACGGG
GTTCCATCAGGATGATATCGTCTCACTCCAGTCAGCAGATCTATACAAGAGCAACCAACGCCTAAGGCTATGGCACGGGGTTCATATGAACTCTTTCCTGGAAGGCCATG
GTTATGTAGTTCCCTTCCCATTTTGCAATTCCGAATTTTGTCCATTGATGAAATTATCTTTTAGTCCGTTCCAATGGCTGGATGATCTTTTAATGTGATGTGGTCTTTTA
TTTGTTAATCAGGTTTTTCGCGATTTGGTCTTTATTCGTTAATTGGGTTTGGGTAGTTCGTTTTTTTTTTTT
Protein sequenceShow/hide protein sequence
MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQASYDKLLSEAPKFKLVTPSILSDRLRINGSLARRAIKDLMARGSIRMISSHSSQQIYTRATNA