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Carg01703 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01703
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionzinc-finger homeodomain protein 9-like
Genome locationCarg_Chr04:9737682..9737954
RNA-Seq ExpressionCarg01703
SyntenyCarg01703
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0000976 - transcription regulatory region sequence-specific DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsIPR006456 - ZF-HD homeobox protein, Cys/His-rich dimerisation domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601431.1 Zinc-finger homeodomain protein 11, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4798.89Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA
        MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA

KAG7032214.1 Zinc-finger homeodomain protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma]8.4e-49100Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA
        MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA

XP_008446349.1 PREDICTED: zinc-finger homeodomain protein 9 [Cucumis melo]3.6e-2372.97Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP
        M++SY++CLKNHAA VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFH          R Y+PYRL  P
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP

XP_022957280.1 zinc-finger homeodomain protein 9-like [Cucurbita moschata]2.6e-2696.67Show/hide
Query:  MVVSYRDCLKNHAAT-VGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPY
        MVVSYRDCLKNHAAT VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFHRHYHPY
Subjt:  MVVSYRDCLKNHAAT-VGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPY

XP_038892725.1 zinc-finger homeodomain protein 10-like [Benincasa hispida]7.2e-2475.68Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP
        MV+SYR+CLKNHAATVGGHALDGCGEFMPS TSTPTDPTSLNCAAC CHRNFH          R Y+PYRL  P
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP

TrEMBL top hitse value%identityAlignment
A0A0A0KSP2 ZF-HD homeobox domain-containing protein1.7e-2372.97Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP
        M++SY++CLKNHAA VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFH          R Y+PYRL  P
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP

A0A1S3BEV3 zinc-finger homeodomain protein 91.7e-2372.97Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP
        M++SY++CLKNHAA VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFH          R Y+PYRL  P
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP

A0A5A7SX18 Zinc-finger homeodomain protein 91.7e-2372.97Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP
        M++SY++CLKNHAA VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFH          R Y+PYRL  P
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFH----------RHYHPYRLRPP

A0A5C7HHG3 ZF-HD dimerization-type domain-containing protein4.7e-2159.6Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR------HYHP----YRLRPPHIGDIEHRSATRGNWDRKTGAQSLD
        MVVSY++CLKNHAA++GGHALDGCGEFMPS TS   DPTSL CAAC CHRNFHR      H++P    Y L PP    + HRS++    D  TG  SLD
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR------HYHP----YRLRPPHIGDIEHRSATRGNWDRKTGAQSLD

A0A6J1H040 zinc-finger homeodomain protein 9-like1.3e-2696.67Show/hide
Query:  MVVSYRDCLKNHAAT-VGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPY
        MVVSYRDCLKNHAAT VGGHALDGCGEFMPSITSTPTDPTSLNCAAC CHRNFHRHYHPY
Subjt:  MVVSYRDCLKNHAAT-VGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPY

SwissProt top hitse value%identityAlignment
Q6ER21 Zinc-finger homeodomain protein 91.5e-1970Show/hide
Query:  YRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPP
        YR+CLKNHAA++GGHALDGCGEFMPS  + P DPTSL CAAC CHRNFHR        PP
Subjt:  YRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPP

Q9FIW9 Zinc-finger homeodomain protein 104.2e-1972.22Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        ++ +Y++CLKNHAA +GGHALDGCGEFMPS +S  +DPTSL CAAC CHRNFHR
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

Q9FKJ9 Zinc-finger homeodomain protein 122.7e-1860.27Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRS
        MVV Y +CLKNHA ++GGHALDGCGEF P  T+  TDP SL C AC CHRNFHR       R P  G  +HRS
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRS

Q9LHF0 Zinc-finger homeodomain protein 94.5e-2180.77Show/hide
Query:  VSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        V+Y++CLKNHAA +GGHALDGCGEFMPS +STP+DPTSL CAAC CHRNFHR
Subjt:  VSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

Q9SEZ1 Zinc-finger homeodomain protein 113.8e-2077.78Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        M V Y++CLKNHAA +GGHALDGCGEFMPS T+T TDP+SL CAAC CHRNFHR
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

Arabidopsis top hitse value%identityAlignment
AT1G69600.1 zinc finger homeodomain 12.7e-2177.78Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        M V Y++CLKNHAA +GGHALDGCGEFMPS T+T TDP+SL CAAC CHRNFHR
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

AT3G28920.1 homeobox protein 343.2e-2280.77Show/hide
Query:  VSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        V+Y++CLKNHAA +GGHALDGCGEFMPS +STP+DPTSL CAAC CHRNFHR
Subjt:  VSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

AT5G15210.1 homeobox protein 304.3e-1971.7Show/hide
Query:  VVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        V +Y++CLKNHAA +GGHALDGCGEFMPS +    DP SL CAAC CHRNFHR
Subjt:  VVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

AT5G39760.1 homeobox protein 233.0e-2072.22Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR
        ++ +Y++CLKNHAA +GGHALDGCGEFMPS +S  +DPTSL CAAC CHRNFHR
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHR

AT5G60480.1 homeobox protein 261.9e-1960.27Show/hide
Query:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRS
        MVV Y +CLKNHA ++GGHALDGCGEF P  T+  TDP SL C AC CHRNFHR       R P  G  +HRS
Subjt:  MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCGTCTCTTACAGAGACTGCCTCAAGAACCACGCCGCCACAGTCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTTATGCCCTCGATTACCTCCACGCCCACCGA
TCCCACCTCTCTAAATTGCGCCGCCTGTTGCTGCCACCGCAACTTCCACCGCCATTACCACCCATATCGTCTCCGCCCCCCACATATTGGGGACATTGAGCACCGGAGCG
CCACCCGAGGAAATTGGGATCGGAAAACGGGTGCTCAGAGTTTGGATGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCGTCTCTTACAGAGACTGCCTCAAGAACCACGCCGCCACAGTCGGCGGCCACGCCCTCGACGGCTGCGGCGAGTTTATGCCCTCGATTACCTCCACGCCCACCGA
TCCCACCTCTCTAAATTGCGCCGCCTGTTGCTGCCACCGCAACTTCCACCGCCATTACCACCCATATCGTCTCCGCCCCCCACATATTGGGGACATTGAGCACCGGAGCG
CCACCCGAGGAAATTGGGATCGGAAAACGGGTGCTCAGAGTTTGGATGCGTAA
Protein sequenceShow/hide protein sequence
MVVSYRDCLKNHAATVGGHALDGCGEFMPSITSTPTDPTSLNCAACCCHRNFHRHYHPYRLRPPHIGDIEHRSATRGNWDRKTGAQSLDA