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Carg01763 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01763
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionprotein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Genome locationCarg_Chr04:9436416..9437432
RNA-Seq ExpressionCarg01763
SyntenyCarg01763
Gene Ontology termsGO:0010468 - regulation of gene expression (biological process)
InterPro domainsIPR039349 - Protein PLASTID REDOX INSENSITIVE 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601371.1 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.8e-93100Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_022956735.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita moschata]5.5e-8997.7Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAP--ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P SSSSLVNPFVNCTLTSSIIYRATPAP  ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAP--ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL

Query:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_022988602.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita maxima]5.7e-8694.77Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP  SSSL  PFVNCTLTSSIIYRATPA A+CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLDS
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_023513712.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X1 [Cucurbita pepo subsp. pepo]6.7e-8795.45Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP-SSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP SSSSSLV PFVNCTLTSSIIYRATPA A+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP-SSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSK---IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSK   IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSK---IFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

XP_023513727.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X2 [Cucurbita pepo subsp. pepo]1.6e-8897.11Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP-SSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP SSSSSLV PFVNCTLTSSIIYRATPA A+CVY DPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP-SSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLD

Query:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  SVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

TrEMBL top hitse value%identityAlignment
A0A1S3BEK8 uncharacterized protein LOC103489034 isoform X11.2e-7382.56Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MA Y C LVSAI VSPAK T FNGL+YPTF  S   S V P VNCTLTSS+IYRATP  A+ VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND DS
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        VV+VCSKIF EYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A5A7SZ04 Uncharacterized protein1.2e-7382.56Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MA Y C LVSAI VSPAK T FNGL+YPTF  S   S V P VNCTLTSS+IYRATP  A+ VYP+PIPEFAEVET+KFKEQLSKKLAKDRETFGND DS
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        VV+VCSKIF EYLHVEYGGPGTL+VEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLD+DWNIW SK G K
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A6J1DB25 protein PLASTID REDOX INSENSITIVE 2-like9.2e-6677.98Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MA + C L+ A AV PAK TCFNGL +PTFSP    SLV PFVNCT TSS  YRATP P   VYPDPIPEFAE ET+KF+E LSKKLA+DR TFGNDLD 
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISK
        VVEVCSKIF EYLHVEYGGP TLLVEPFTNMFIALNERKLPGA LAARTSLLWAQN+LD DW IW SK
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISK

A0A6J1GYK9 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X12.6e-8997.7Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAP--ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTF P SSSSLVNPFVNCTLTSSIIYRATPAP  ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAP--ATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDL

Query:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  DSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

A0A6J1JDH3 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like isoform X12.7e-8694.77Show/hide
Query:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS
        MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSP  SSSL  PFVNCTLTSSIIYRATPA A+CVY DPIPEFAEVET+KFKEQLSKKLAKDRETFGNDLDS
Subjt:  MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDS

Query:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK
        VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLA RTSLLWAQNYLDHDWNIWISKRGLK
Subjt:  VVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK

SwissProt top hitse value%identityAlignment
B6UFC7 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic2.9e-2448.54Show/hide
Query:  YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDW
        +PDPIPEFAE ET KF+E ++ +L + +E  FG+ ++ +V+VC++I   +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+  +D DW
Subjt:  YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGNDLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDW

Query:  NIW
          W
Subjt:  NIW

Q6H612 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic1.9e-2339.64Show/hide
Query:  AIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCV-------------YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGN
        A AV+PA       LN P  + S+SSS  +  +  ++   +  RA P PA  V             +PDPIPEFA  ET KFKE +  +L + ++  FG 
Subjt:  AIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCV-------------YPDPIPEFAEVETKKFKEQLSKKLAKDRET-FGN

Query:  DLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW
         ++ +V+VC++I   +L  +Y GPGTLLV PF +M   + ER LPGAP AAR ++ WA+  +D DW  W
Subjt:  DLDSVVEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW

Q9XIK0 Protein PLASTID REDOX INSENSITIVE 2, chloroplastic2.1e-2743.29Show/hide
Query:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV
        S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A   +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +
Subjt:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV

Query:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW
        V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Subjt:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW

Arabidopsis top hitse value%identityAlignment
AT1G10522.1 unknown protein1.5e-2843.29Show/hide
Query:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV
        S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A   +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +
Subjt:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV

Query:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW
        V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Subjt:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW

AT1G10522.2 unknown protein1.5e-2843.29Show/hide
Query:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV
        S+ C L   I  SPA  +C   +    F      + V  F   +L+    + RA    A   +PDPIPEFAE ET+KF++ +  KL+K R+ F + +D +
Subjt:  SYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLT-SSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSV

Query:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW
        V VC++IF  +L  EYGGPGTLLV PF +M   LNER+LPG P AAR ++ WAQ+++D DW  W
Subjt:  VEVCSKIFSEYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTCCCCTTCTTCTTCTTCTTC
CCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAGAAG
TTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGATATTTAGT
GAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGCTGC
AAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTCCTACAGTTGCGTTCTGGTTTCAGCCATTGCAGTTTCTCCCGCCAAGACTACATGCTTCAACGGACTTAATTATCCAACATTTTCCCCTTCTTCTTCTTCTTC
CCTTGTAAACCCCTTTGTTAATTGTACCTTAACTTCTTCCATCATATACAGAGCAACTCCGGCCCCGGCCACCTGCGTTTACCCTGATCCGATACCGGAGTTTGCAGAAG
TTGAAACCAAGAAATTTAAGGAGCAGTTATCGAAGAAGCTAGCGAAGGATCGCGAGACGTTTGGGAACGACCTCGATTCGGTTGTGGAGGTTTGCTCAAAGATATTTAGT
GAATATTTGCATGTGGAGTACGGAGGTCCTGGGACATTATTAGTGGAGCCTTTCACTAATATGTTTATTGCTCTAAACGAGAGGAAATTACCTGGAGCGCCTTTGGCTGC
AAGAACTTCGCTTCTATGGGCTCAAAACTATCTAGATCACGATTGGAACATTTGGATCTCAAAACGAGGGCTCAAATGA
Protein sequenceShow/hide protein sequence
MASYSCVLVSAIAVSPAKTTCFNGLNYPTFSPSSSSSLVNPFVNCTLTSSIIYRATPAPATCVYPDPIPEFAEVETKKFKEQLSKKLAKDRETFGNDLDSVVEVCSKIFS
EYLHVEYGGPGTLLVEPFTNMFIALNERKLPGAPLAARTSLLWAQNYLDHDWNIWISKRGLK