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Carg01782 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01782
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:9339965..9342760
RNA-Seq ExpressionCarg01782
SyntenyCarg01782
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7016655.1 hypothetical protein SDJN02_21765 [Cucurbita argyrosperma subsp. argyrosperma]4.3e-0440.3Show/hide
Query:  KVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI
        K++Q   +RTA+L V++H TKIR FF E  IL K L +    ++Q +++ M+L  K  +  PK IK+
Subjt:  KVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI

KAG7032136.1 hypothetical protein SDJN02_06179, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-68100Show/hide
Query:  MKASSETSGIANREISGRVLWLLQLQHVYAAGRDVAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNL
        MKASSETSGIANREISGRVLWLLQLQHVYAAGRDVAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNL
Subjt:  MKASSETSGIANREISGRVLWLLQLQHVYAAGRDVAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNL

Query:  RPKLIKISDGEARNKSRRNDGFYRMIKLEKWVNSAK
        RPKLIKISDGEARNKSRRNDGFYRMIKLEKWVNSAK
Subjt:  RPKLIKISDGEARNKSRRNDGFYRMIKLEKWVNSAK

PON74615.1 LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_050220 [Parasponia andersonii]5.6e-0437.7Show/hide
Query:  IIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI
        ++RT +L+V +HL+++R FFLE G+L ++  MA+G++V+   + +VL  +P +L P+L+++
Subjt:  IIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI

XP_020547618.1 uncharacterized protein LOC110011590 [Sesamum indicum]2.0e-0940.82Show/hide
Query:  REISGRVLWLLQLQHVYAAGRD---VAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI
        R  S + ++L   + V    R+   VAW +FK++Q   +RT NL++ +H  KIRSFFLEP IL  N  +A+  +VQ V + MVL  K K L P+L+++
Subjt:  REISGRVLWLLQLQHVYAAGRD---VAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI

TrEMBL top hitse value%identityAlignment
A0A2P5DMU3 Uncharacterized protein2.7e-0437.7Show/hide
Query:  IIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI
        ++RT +L+V +HL+++R FFLE G+L ++  MA+G++V+   + +VL  +P +L P+L+++
Subjt:  IIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCATCAAGTGAAACAAGTGGAATAGCCAATCGTGAAATATCTGGACGGGTACTTTGGCTCCTCCAGCTTCAGCATGTGTATGCGGCGGGCAGGGATGTTGCATG
GAATATCTTCAAGGTTACTCAAGCAAGGATTATAAGGACTGCCAATTTGCAAGTCACTGAGCATCTGACGAAGATCAGAAGCTTCTTCCTTGAGCCTGGCATTCTCCAAA
AGAACCTTTTCATGGCTATCGGATACATGGTTCAATTTGTCTATCAGTTCATGGTTCTCGGTGCGAAGCCGAAGAACCTGAGACCAAAGCTCATCAAGATTAGTGATGGT
GAGGCAAGGAATAAGAGCAGGAGGAATGATGGGTTTTATAGGATGATAAAGCTGGAAAAGTGGGTCAATTCAGCAAAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGCATCAAGTGAAACAAGTGGAATAGCCAATCGTGAAATATCTGGACGGGTACTTTGGCTCCTCCAGCTTCAGCATGTGTATGCGGCGGGCAGGGATGTTGCATG
GAATATCTTCAAGGTTACTCAAGCAAGGATTATAAGGACTGCCAATTTGCAAGTCACTGAGCATCTGACGAAGATCAGAAGCTTCTTCCTTGAGCCTGGCATTCTCCAAA
AGAACCTTTTCATGGCTATCGGATACATGGTTCAATTTGTCTATCAGTTCATGGTTCTCGGTGCGAAGCCGAAGAACCTGAGACCAAAGCTCATCAAGATTAGTGATGGT
GAGGCAAGGAATAAGAGCAGGAGGAATGATGGGTTTTATAGGATGATAAAGCTGGAAAAGTGGGTCAATTCAGCAAAGTAA
Protein sequenceShow/hide protein sequence
MKASSETSGIANREISGRVLWLLQLQHVYAAGRDVAWNIFKVTQARIIRTANLQVTEHLTKIRSFFLEPGILQKNLFMAIGYMVQFVYQFMVLGAKPKNLRPKLIKISDG
EARNKSRRNDGFYRMIKLEKWVNSAK