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Carg01842 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01842
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCLAVATA3/ESR (CLE)-related protein 43
Genome locationCarg_Chr04:9047284..9047595
RNA-Seq ExpressionCarg01842
SyntenyCarg01842
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsIPR040274 - CLAVATA3/ESR (CLE)-related protein 27/43


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573960.1 CLAVATA3/ESR (CLE)-related protein 27, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2565.45Show/hide
Query:  MCTRRIATSSSSSFALLIFILWVSQIWV-CSHCQARASRIF-----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAF-DRHRRDEGFEDSKRR
        MCTRRIA  +SSSFA+LI ILWVSQIWV C   QARASRIF     PPPPPHT D T         +AN   ELL+KYFK +AF D HR  EGF DSKR+
Subjt:  MCTRRIATSSSSSFALLIFILWVSQIWV-CSHCQARASRIF-----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAF-DRHRRDEGFEDSKRR

Query:  IPSCPDPLHN
        IPSCPDPLHN
Subjt:  IPSCPDPLHN

KAG6601288.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. sororia]1.1e-52100Show/hide
Query:  MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
        MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
Subjt:  MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

KAG7032076.1 CLAVATA3/ESR (CLE)-related protein 43, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-52100Show/hide
Query:  MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
        MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
Subjt:  MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

KGN52083.1 hypothetical protein Csa_008231 [Cucumis sativus]1.9e-3370.27Show/hide
Query:  MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIF----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKR
        M  RRI TSSSSS    FA+LI ILWVSQIWVC HCQARASRIF    PPPPPH AD +L+G++K     NA+ +LL+KYF G+AFDRHR DEGFEDSKR
Subjt:  MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIF----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKR

Query:  RIPSCPDPLHN
        +IPSCPDPLHN
Subjt:  RIPSCPDPLHN

XP_022150497.1 uncharacterized protein LOC111018633 [Momordica charantia]1.1e-2364.36Show/hide
Query:  MCTRRIA--TSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCP
        MCTRRIA  +SS+SSFA+LI ILWVSQIWVC HCQARASRI PPP        LTGD K+  +A+ + EL++KY +G+A DRH   EGFEDSKRR+PSC 
Subjt:  MCTRRIA--TSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCP

Query:  D
        D
Subjt:  D

TrEMBL top hitse value%identityAlignment
A0A067GNI3 Uncharacterized protein1.4e-1347.12Show/hide
Query:  RRIATSSSSSF----ALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPD
        R + +SSSSSF    A+L+ I+ V QIWVC  CQ  A RIF  P        +T + K    +  E +L+RKYF G AF+  R ++G  D KRR+PSCPD
Subjt:  RRIATSSSSSF----ALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPD

Query:  PLHN
        PLHN
Subjt:  PLHN

A0A0A0KR66 Uncharacterized protein9.4e-3470.27Show/hide
Query:  MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIF----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKR
        M  RRI TSSSSS    FA+LI ILWVSQIWVC HCQARASRIF    PPPPPH AD +L+G++K     NA+ +LL+KYF G+AFDRHR DEGFEDSKR
Subjt:  MCTRRIATSSSSS----FALLIFILWVSQIWVCSHCQARASRIF----PPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKR

Query:  RIPSCPDPLHN
        +IPSCPDPLHN
Subjt:  RIPSCPDPLHN

A0A2C9UKL3 Uncharacterized protein1.2e-1240.78Show/hide
Query:  TRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPP--PPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
        +RR    SSS   L++F+++V QIWVCS C+A A RIFP     P+     ++       N +++ +L  K+F G+ +  +   +GFE++KRR+PSCPDP
Subjt:  TRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPP--PPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

A0A2C9VNI0 Uncharacterized protein1.9e-1344.66Show/hide
Query:  TRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPP--PPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP
        +RR    SSS  AL++F++++ QIWVCS C+A A RIFP    P       +T       N   +++LLRK+F G+A   +   +GFE++KRR+PSCPDP
Subjt:  TRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPP--PPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDP

Query:  LHN
        LHN
Subjt:  LHN

A0A6J1DAV9 uncharacterized protein LOC1110186335.2e-2464.36Show/hide
Query:  MCTRRIA--TSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCP
        MCTRRIA  +SS+SSFA+LI ILWVSQIWVC HCQARASRI PPP        LTGD K+  +A+ + EL++KY +G+A DRH   EGFEDSKRR+PSC 
Subjt:  MCTRRIA--TSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCP

Query:  D
        D
Subjt:  D

SwissProt top hitse value%identityAlignment
Q6IWB1 CLAVATA3/ESR (CLE)-related protein 434.0e-0532.97Show/hide
Query:  SFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDPLHN
        +F++ + ++ + QIW+    + +   +         +T +T   K N N + +R L ++YFKG++F  +  +  FEDS RRIPS PD LHN
Subjt:  SFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDPLHN

Arabidopsis top hitse value%identityAlignment
AT1G25425.1 CLAVATA3/ESR-RELATED 432.8e-0632.97Show/hide
Query:  SFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDPLHN
        +F++ + ++ + QIW+    + +   +         +T +T   K N N + +R L ++YFKG++F  +  +  FEDS RRIPS PD LHN
Subjt:  SFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDPLHN

AT3G25905.1 CLAVATA3/ESR-RELATED 271.6e-0430.93Show/hide
Query:  SSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRR--DEGFEDSKRRIPSCPDPLHN
        SS ++  L++ +L       C + +  A RIFP  P               +    E +L++KYF    F        +G  +SKR +PSCPDPLHN
Subjt:  SSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRR--DEGFEDSKRRIPSCPDPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTACCAGAAGAATCGCCACTTCCTCCTCCTCTTCTTTTGCCCTGCTAATTTTCATCCTCTGGGTGTCACAGATTTGGGTTTGCTCTCACTGCCAAGCTAGAGCTTC
ACGGATTTTTCCTCCGCCGCCGCCGCACACGGCGGACACAACACTCACTGGCGACCAAAAATACAACGCCAACGCCAACGCCGAAAGAGAACTTCTCCGAAAATACTTCA
AGGGAAAGGCCTTCGATCGACATCGCCGCGATGAAGGATTCGAAGACAGCAAACGGAGAATACCCAGTTGTCCGGATCCTCTTCATAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGTACCAGAAGAATCGCCACTTCCTCCTCCTCTTCTTTTGCCCTGCTAATTTTCATCCTCTGGGTGTCACAGATTTGGGTTTGCTCTCACTGCCAAGCTAGAGCTTC
ACGGATTTTTCCTCCGCCGCCGCCGCACACGGCGGACACAACACTCACTGGCGACCAAAAATACAACGCCAACGCCAACGCCGAAAGAGAACTTCTCCGAAAATACTTCA
AGGGAAAGGCCTTCGATCGACATCGCCGCGATGAAGGATTCGAAGACAGCAAACGGAGAATACCCAGTTGTCCGGATCCTCTTCATAATTAG
Protein sequenceShow/hide protein sequence
MCTRRIATSSSSSFALLIFILWVSQIWVCSHCQARASRIFPPPPPHTADTTLTGDQKYNANANAERELLRKYFKGKAFDRHRRDEGFEDSKRRIPSCPDPLHN