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Carg01897 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01897
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionNuclear transport factor 2 (NTF2) family protein
Genome locationCarg_Chr04:8741299..8744274
RNA-Seq ExpressionCarg01897
SyntenyCarg01897
Gene Ontology termsNA
InterPro domainsIPR032710 - NTF2-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601231.1 Exocyst complex component EXO70A1, partial [Cucurbita argyrosperma subsp. sororia]6.8e-98100Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
XP_004135041.1 uncharacterized protein LOC101206496 isoform X2 [Cucumis sativus]3.7e-8890.66Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M G GEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+  E+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYV+EGKIVRHEDWWNKKPLLNRETV+LPMVGR LEMTRRCAMLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
XP_022957109.1 uncharacterized protein LOC111458589 [Cucurbita moschata]6.8e-98100Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
XP_022986748.1 uncharacterized protein LOC111484382 [Cucurbita maxima]1.9e-9597.25Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDP IEASSKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGK++RHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
XP_023529231.1 uncharacterized protein LOC111792126 [Cucurbita pepo subsp. pepo]4.9e-9698.35Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDPTIEA+SKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
TrEMBL top hitse value%identityAlignment
A0A0A0KUR1 Uncharacterized protein1.8e-8890.66Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M G GEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEY+  E+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYV+EGKIVRHEDWWNKKPLLNRETV+LPMVGR LEMTRRCAMLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
A0A1S3BFU1 uncharacterized protein LOC103489375 isoform X24.9e-8689.01Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFSESRIVEY  KE+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEI VDNKQHYKFLGRNIDLESLIKLYV+EGKIVRHEDWWNKKPLLNRETV+LPMVGR LEMTRR  MLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
A0A5D3CB20 Nuclear transport factor 2 family protein4.9e-8689.01Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEIT DPTIEA +KEACD K TKR ADDIMPHILNLYGSSATPRDFEIYA DASF+DPLTRA+GVKEIKSAFYSLSKVFSESRIVEY  KE+LISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEI VDNKQHYKFLGRNIDLESLIKLYV+EGKIVRHEDWWNKKPLLNRETV+LPMVGR LEMTRR  MLATHAMM FGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
A0A6J1H109 uncharacterized protein LOC1114585893.3e-98100Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
A0A6J1JHF8 uncharacterized protein LOC1114843829.0e-9697.25Show/hide
Query:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
        M GDGEITEDP IEASSKEACD KATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP
Subjt:  MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISP

Query:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGK++RHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
Subjt:  GKHEITVDNKQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G04830.1 Nuclear transport factor 2 (NTF2) family protein3.5e-6871.1Show/hide
Query:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN
        DP  E   K AC+LK+ KRFAD IMPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SPGK EI +DN
Subjt:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN

Query:  KQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        KQHYK +GRNID+ SLIKLYV +GKIVRHEDWW+KKPL NR+TV  P+VGRV+EM RR  MLATHAMM FGKD
Subjt:  KQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
AT5G04830.2 Nuclear transport factor 2 (NTF2) family protein3.5e-6871.1Show/hide
Query:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN
        DP  E   K AC+LK+ KRFAD IMPH+LNLYGSSA   DF++YA +ASFEDPLT A GVK+IKSAFYSL KVF ES+IVEY ++E   SPGK EI +DN
Subjt:  DPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDN

Query:  KQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD
        KQHYK +GRNID+ SLIKLYV +GKIVRHEDWW+KKPL NR+TV  P+VGRV+EM RR  MLATHAMM FGKD
Subjt:  KQHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGGGAGATGGTGAAATCACAGAGGATCCAACCATTGAAGCAAGCAGCAAGGAGGCATGCGATTTGAAAGCGACGAAGCGTTTTGCCGATGATATCATGCCTCATAT
TCTCAATCTTTATGGATCTTCTGCAACGCCTCGGGATTTCGAAATCTACGCTGCCGATGCTTCATTCGAGGATCCACTGACGAGAGCTCACGGAGTGAAGGAAATCAAAT
CGGCATTTTATTCTCTGTCCAAGGTCTTTAGTGAATCAAGAATTGTGGAATACAGTGTCAAAGAGAAACTTATTTCCCCTGGAAAACACGAGATTACAGTCGATAATAAG
CAACACTACAAGTTTCTGGGAAGAAACATAGATTTGGAATCCCTCATCAAGTTGTATGTTCTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACT
TTTGAATAGAGAAACAGTGAAGTTACCAATGGTGGGTCGAGTTTTGGAAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGAGATTTGGCAAGGATTGA
mRNA sequenceShow/hide mRNA sequence
CATAATTTTTGCGGAGAGAGTTGAAAAGTAGGAGTTTAAATTTGAAAGGCCAAAAGAGTGGCCACGTTGCGCGTCATTGAAGACCAACTCAAAATGAAGTCGTGGAGCTT
CTTCAGGATTCTAGTTCTGCTTCGCAGCGAAGAAAATTGGAGCATTCTCGAAGAACCACACTCGCTCCGGATTCGTTGCTGTTCCTAAAAATGCTGGGAGATGGTGAAAT
CACAGAGGATCCAACCATTGAAGCAAGCAGCAAGGAGGCATGCGATTTGAAAGCGACGAAGCGTTTTGCCGATGATATCATGCCTCATATTCTCAATCTTTATGGATCTT
CTGCAACGCCTCGGGATTTCGAAATCTACGCTGCCGATGCTTCATTCGAGGATCCACTGACGAGAGCTCACGGAGTGAAGGAAATCAAATCGGCATTTTATTCTCTGTCC
AAGGTCTTTAGTGAATCAAGAATTGTGGAATACAGTGTCAAAGAGAAACTTATTTCCCCTGGAAAACACGAGATTACAGTCGATAATAAGCAACACTACAAGTTTCTGGG
AAGAAACATAGATTTGGAATCCCTCATCAAGTTGTATGTTCTTGAAGGAAAAATAGTTCGTCATGAGGACTGGTGGAATAAGAAACCACTTTTGAATAGAGAAACAGTGA
AGTTACCAATGGTGGGTCGAGTTTTGGAAATGACTCGCAGATGTGCGATGTTAGCAACTCATGCAATGATGAGATTTGGCAAGGATTGAACTGTACCAAACCCATCCATT
ACACTGAATCAGTATAGCTTCTCTCTTTCACTATGTAGATTTACAGTGTATCGCCTCAATGGAAATGAGAACAAAGGTTAGTACATTACTACTACAAGTTTGTATTTTCT
AAATTGTACAAGTTTGTATTCTCTAAATTTTGTTGCGATTATGATGTAAGTAGTTGATCGTTAATTCTAATGTTGTGTGAATTTTAAAAAACATTAAAGGTAGGGTGTGA
GATCCCACGTCGGTTGGAGAAAAGAACAAAGCATTATAAGGGTGTGGAAACCTCTCATAGC
Protein sequenceShow/hide protein sequence
MLGDGEITEDPTIEASSKEACDLKATKRFADDIMPHILNLYGSSATPRDFEIYAADASFEDPLTRAHGVKEIKSAFYSLSKVFSESRIVEYSVKEKLISPGKHEITVDNK
QHYKFLGRNIDLESLIKLYVLEGKIVRHEDWWNKKPLLNRETVKLPMVGRVLEMTRRCAMLATHAMMRFGKD