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Carg01908 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01908
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:8681572..8683937
RNA-Seq ExpressionCarg01908
SyntenyCarg01908
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601216.1 hypothetical protein SDJN03_06449, partial [Cucurbita argyrosperma subsp. sororia]4.8e-2198.33Show/hide
Query:  GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ
        GGSRRSRVREVAEMDEALKRWTLASAS NQNSNALEHSVGGAARSDRSVPAELSEDSITQ
Subjt:  GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ

KAG7032011.1 hypothetical protein SDJN02_06053, partial [Cucurbita argyrosperma subsp. argyrosperma]9.1e-44100Show/hide
Query:  GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQNSLIAFSKADRIKSLMMSSPMVYAIGAAYKGVHLQFSVYA
        GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQNSLIAFSKADRIKSLMMSSPMVYAIGAAYKGVHLQFSVYA
Subjt:  GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQNSLIAFSKADRIKSLMMSSPMVYAIGAAYKGVHLQFSVYA

XP_022956632.1 uncharacterized protein LOC111458305 isoform X1 [Cucurbita moschata]3.4e-1497.87Show/hide
Query:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ
        MDEALKRWTLASAS NQNSNALEHSVGGAARSDRSVPAELSEDSITQ
Subjt:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ

XP_022956633.1 uncharacterized protein LOC111458305 isoform X2 [Cucurbita moschata]3.4e-1497.87Show/hide
Query:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ
        MDEALKRWTLASAS NQNSNALEHSVGGAARSDRSVPAELSEDSITQ
Subjt:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ

TrEMBL top hitse value%identityAlignment
A0A6J1GWW6 uncharacterized protein LOC111458305 isoform X11.6e-1497.87Show/hide
Query:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ
        MDEALKRWTLASAS NQNSNALEHSVGGAARSDRSVPAELSEDSITQ
Subjt:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ

A0A6J1GXH9 uncharacterized protein LOC111458305 isoform X21.6e-1497.87Show/hide
Query:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ
        MDEALKRWTLASAS NQNSNALEHSVGGAARSDRSVPAELSEDSITQ
Subjt:  MDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
GGAGGATCGCGAAGGTCCCGAGTCAGGGAGGTCGCTGAGATGGATGAGGCCTTGAAACGATGGACACTGGCCTCCGCTTCTACCAATCAAAATTCTAATGCCTTGGAGCA
TTCCGTTGGCGGTGCTGCTCGCTCAGATCGTTCGGTTCCTGCTGAACTGTCCGAGGATTCTATCACTCAGAATTCTCTAATAGCGTTTTCTAAGGCAGATAGAATAAAAT
CGCTTATGATGTCGTCGCCCATGGTTTACGCGATTGGCGCGGCATATAAAGGCGTCCACCTTCAGTTTTCGGTCTATGCTTGA
mRNA sequenceShow/hide mRNA sequence
GGAGGATCGCGAAGGTCCCGAGTCAGGGAGGTCGCTGAGATGGATGAGGCCTTGAAACGATGGACACTGGCCTCCGCTTCTACCAATCAAAATTCTAATGCCTTGGAGCA
TTCCGTTGGCGGTGCTGCTCGCTCAGATCGTTCGGTTCCTGCTGAACTGTCCGAGGATTCTATCACTCAGAATTCTCTAATAGCGTTTTCTAAGGCAGATAGAATAAAAT
CGCTTATGATGTCGTCGCCCATGGTTTACGCGATTGGCGCGGCATATAAAGGCGTCCACCTTCAGTTTTCGGTCTATGCTTGA
Protein sequenceShow/hide protein sequence
GGSRRSRVREVAEMDEALKRWTLASASTNQNSNALEHSVGGAARSDRSVPAELSEDSITQNSLIAFSKADRIKSLMMSSPMVYAIGAAYKGVHLQFSVYA