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Carg01909 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01909
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:8678164..8680205
RNA-Seq ExpressionCarg01909
SyntenyCarg01909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601215.1 R3H domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]6.4e-0947.12Show/hide
Query:  LVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISRFCSELY
        LVALATDNDEKLNIRINNLLGMFLQDLGRS    +  +  +A   + + V+ +  +                              ISSTSISRFCSELY
Subjt:  LVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISRFCSELY

Query:  QILS
        QIL+
Subjt:  QILS
KAG7032010.1 hypothetical protein SDJN02_06052, partial [Cucurbita argyrosperma subsp. argyrosperma]2.2e-78100Show/hide
Query:  MPAPCHLVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISR
        MPAPCHLVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISR
Subjt:  MPAPCHLVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISR

Query:  FCSELYQILSSKSGNRLHMGSSGNFTLDEQVLNIVVEKKLRLFGSSLRFSI
        FCSELYQILSSKSGNRLHMGSSGNFTLDEQVLNIVVEKKLRLFGSSLRFSI
Subjt:  FCSELYQILSSKSGNRLHMGSSGNFTLDEQVLNIVVEKKLRLFGSSLRFSI
TrEMBL top hitse value%identityAlignment
No hits found
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGCTCCCTGCCATCTGGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATATAAGAATCAACAATTTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGCAT
ACGGGAGGATATGAGCTGTGCTTGTAAGAATGCCAAAAATTTGGTGAAATGGAATGTCATGGAAGAAAGATCAGTCACACAACCCAGAGAAGATCAAACATGGGAAAAAT
GTTCGGATCAAGTGAGATCTGTTGCTGCAGCTCGAGTACCATTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTTTCG
AGCAAATCTGGGAATCGGCTACACATGGGATCGAGTGGCAATTTCACCCTTGATGAGCAGGTTCTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCT
TCGATTTTCAATCTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTGCTCCCTGCCATCTGGTTGCTCTTGCCACTGATAATGATGAAAAGTTAAATATAAGAATCAACAATTTGCTGGGAATGTTCCTGCAAGATCTTGGACGAAGCAT
ACGGGAGGATATGAGCTGTGCTTGTAAGAATGCCAAAAATTTGGTGAAATGGAATGTCATGGAAGAAAGATCAGTCACACAACCCAGAGAAGATCAAACATGGGAAAAAT
GTTCGGATCAAGTGAGATCTGTTGCTGCAGCTCGAGTACCATTTGGAAATCTCAGAATTTCGTCAACATCGATTTCTCGTTTTTGCTCTGAACTCTACCAAATCCTTTCG
AGCAAATCTGGGAATCGGCTACACATGGGATCGAGTGGCAATTTCACCCTTGATGAGCAGGTTCTGAACATTGTTGTGGAGAAGAAGTTGAGACTGTTTGGAAGTTCTCT
TCGATTTTCAATCTGATTTTTTGAAAAGATCATTGAAATTTTGTTTATTCAAGTGCTTTTCCCTTGGTTTGGCCCACTCCCCACTTGTTGAACAACCAAAAAAAGCTCCA
AATGTGGCAGTTTTTAAGCTTCAAATAGGGTATTAGTTAGTCATCTTAGTGTCAAAACGATGTGACAACAGACAAGTCGATAATAAATATTCTCCCTTTTAGGAATTCTT
TATGAAACTGGAACTCCTTGAAAACTATCGGTAATTTTTATGGGATTTATCAGTCTAAGCAGG
Protein sequenceShow/hide protein sequence
MPAPCHLVALATDNDEKLNIRINNLLGMFLQDLGRSIREDMSCACKNAKNLVKWNVMEERSVTQPREDQTWEKCSDQVRSVAAARVPFGNLRISSTSISRFCSELYQILS
SKSGNRLHMGSSGNFTLDEQVLNIVVEKKLRLFGSSLRFSI