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Carg01911 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01911
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCopper transport protein like
Genome locationCarg_Chr04:8669939..8672078
RNA-Seq ExpressionCarg01911
SyntenyCarg01911
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006121 - Heavy metal-associated domain, HMA
IPR036163 - Heavy metal-associated domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573880.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3089.02Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWED+AP A+    AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

KAG6601214.1 Copper transport protein ATX1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-34100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAA

XP_008446769.1 PREDICTED: copper transport protein ATX1-like [Cucumis melo]1.2e-3091.46Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWEDDA AA A T A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

XP_022956634.1 copper transport protein ATX1-like [Cucurbita moschata]6.3e-35100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

XP_023541206.1 copper transport protein ATX1-like [Cucurbita pepo subsp. pepo]2.5e-3191.46Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWED+APAA+   VAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

TrEMBL top hitse value%identityAlignment
A0A1S3BFW4 copper transport protein ATX1-like6.0e-3191.46Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWEDDA AA A T A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

A0A5A7SZ31 Copper transport protein ATX1-like6.0e-3191.46Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGV+TFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWEDDA AA A T A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

A0A6J1FZY8 copper transport protein ATX1-like1.0e-3089.02Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAV+RVLGKLEGVETFDIDIDAQKVTVKGNV RDVVFQTVSKTGKKTAYWED+APA +    AAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

A0A6J1GZL9 copper transport protein ATX1-like3.1e-35100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

A0A6J1JL25 copper transport protein ATX1-like3.1e-35100Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
        MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA

SwissProt top hitse value%identityAlignment
B3H6D0 Heavy metal-associated isoprenylated plant protein 453.3e-1049.18Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW

F4JZL7 Heavy metal-associated isoprenylated plant protein 331.4e-0847.69Show/hide
Query:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW
        QT VLKV + C GC   VK++L K+EGV T  ID +  KVTV GNV   V+ + + K+GK    W
Subjt:  QTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW

O82089 Copper transport protein CCH2.3e-2476.71Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKTGKKT+YW  +A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPA

Q84J88 Heavy metal-associated isoprenylated plant protein 368.1e-0940.62Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW

Q94BT9 Copper transport protein ATX12.3e-2472.37Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA

Arabidopsis top hitse value%identityAlignment
AT1G66240.1 homolog of anti-oxidant 11.7e-2572.37Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA
        MSQT VL+VAM+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA

AT1G66240.2 homolog of anti-oxidant 11.9e-2171.21Show/hide
Query:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA
        M+C+GCVGAVKRVLGK+EGVE+FD+DI  QKVTVKGNV  D V QTV+KTGKKTA+WE +   A A
Subjt:  MSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASA

AT3G56240.1 copper chaperone1.7e-2576.71Show/hide
Query:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPA
        M+QT VLKV MSCQGCVGAV RVLGK+EGVE+FDIDI  QKVTVKGNV  + VFQTVSKTGKKT+YW  +A A
Subjt:  MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPA

AT3G56891.1 Heavy metal transport/detoxification superfamily protein2.3e-1149.18Show/hide
Query:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW
        L V M C+GC   V+R + KL+GV+T +ID+D QKVTV G V R+ V + V +TG+   YW
Subjt:  LKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW

AT5G27690.1 Heavy metal transport/detoxification superfamily protein5.7e-1040.62Show/hide
Query:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW
        T VL+V++ C+GC   +K++L K++GV T +ID+  QKVTV GNV  +++ + + K G+    W
Subjt:  TTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCAGTCAAAAGGGTCTTGGGGAAACTGGAAGGTGTCGAGACATTTGACATCGATAT
AGATGCTCAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAACTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAG
CATCTGCCCAGACTGTGGCTGCTGCTTAA
mRNA sequenceShow/hide mRNA sequence
TATTATAAATTTCGGTTGACCCGACCCATTAGACAGAGTCTATTAAAGCCCCGTGAAAGCCCGGCAAAATCCAGTAGCGTAGAGATCGGCGAGGGCGAATTTTCGATTGC
ATTTTCGTTCGTTTCTCTTCTGAATTTCTGTAATCTGTAACGATGTCTCAGACTACTGTCCTCAAGGTTGCTATGTCATGTCAGGGCTGTGTTGGAGCAGTCAAAAGGGT
CTTGGGGAAACTGGAAGGTGTCGAGACATTTGACATCGATATAGATGCTCAAAAGGTGACTGTGAAAGGCAATGTGAGTCGCGATGTAGTTTTCCAAACCGTTTCGAAAA
CTGGGAAGAAGACTGCCTACTGGGAAGACGACGCCCCAGCAGCATCTGCCCAGACTGTGGCTGCTGCTTAAAATTTACTCCATGGAAATTTTCTGTTCATTGCGTAAGGT
CTTTGCTTCCTGAAGCTAATAATGTTGTAATAGTACGTGAACTTGGCAATTTAGTCTTGTAATATTTTTATTGGAGCGTCTTTTGCATGACCTTCTACCTTAAAACTTAT
CTATATTCTACCCATACGTTTTTGTTTTGCCCCAATTGTTTCATTTTGACCTTTGCTTTTGAGATGATTGATGAATTAATGAAGAATGCCTTCCATGGCTTCTTCTTGTT
G
Protein sequenceShow/hide protein sequence
MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETFDIDIDAQKVTVKGNVSRDVVFQTVSKTGKKTAYWEDDAPAASAQTVAAA