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Carg01912 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01912
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description60S acidic ribosomal protein P2-like
Genome locationCarg_Chr04:8666780..8668573
RNA-Seq ExpressionCarg01912
SyntenyCarg01912
Gene Ontology termsGO:0002182 - cytoplasmic translational elongation (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain
IPR044076 - Ribosomal protein P2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004150488.1 60S acidic ribosomal protein P2-4 [Cucumis sativus]5.1e-4391.23Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGN++PSAKDLKDILGSVGAEVDE++I LL+S+VKGKDITELIASGREKLASVPSGGGAAVAVAA GGGGGAAAPA AE+KKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_008446770.1 PREDICTED: 60S acidic ribosomal protein P2-4-like [Cucumis melo]1.3e-4391.23Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGN SPSAKDLKDILGSVGAE+DE++IELL+S+VKGKD+TELIASGREKLASVPSGGGAAVAVAA GGGGGAAAPA AE+KKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_022957078.1 60S acidic ribosomal protein P2-1-like [Cucurbita moschata]3.4e-47100Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_022984367.1 60S acidic ribosomal protein P2-4-like [Cucurbita maxima]7.6e-4799.12Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAA+GGGGGAAAPAAAESKKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

XP_038891319.1 60S acidic ribosomal protein P2-2-like [Benincasa hispida]7.4e-4289.57Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAA-APAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLKDILGSVGAE+DE++IELL+S+VKGKD+TELIASGREKLASVPSGGGA VA AA GGGGG A APAAAESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAA-APAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

TrEMBL top hitse value%identityAlignment
A0A0A0KRE0 Uncharacterized protein2.5e-4391.23Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGN++PSAKDLKDILGSVGAEVDE++I LL+S+VKGKDITELIASGREKLASVPSGGGAAVAVAA GGGGGAAAPA AE+KKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A1S3BFW0 60S acidic ribosomal protein P2-4-like6.5e-4491.23Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGN SPSAKDLKDILGSVGAE+DE++IELL+S+VKGKD+TELIASGREKLASVPSGGGAAVAVAA GGGGGAAAPA AE+KKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A6J1FZV9 60S acidic ribosomal protein P2-2-like4.7e-4290.43Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAA-AGGGGGAAAPAAAESKKEEKVE
        MKIVAAYLLAVLGGN+SPSAKDLK+ILGSVGAEVD++KIELL+SSVKGKD+TELIASGREKLASVPSGGGAA+AVAA  GGGGG AAPAA ESKKEEKVE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAA-AGGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLFD
Subjt:  EKEESDDDMGFSLFD

A0A6J1GZ75 60S acidic ribosomal protein P2-1-like1.7e-47100Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

A0A6J1J1Z8 60S acidic ribosomal protein P2-4-like3.7e-4799.12Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAA+GGGGGAAAPAAAESKKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

SwissProt top hitse value%identityAlignment
P41099 60S acidic ribosomal protein P25.9e-3473.68Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MK++AA+LLA+LGGN SP+ +DLK IL SVGA+ D+DKIELL+S VKGKDITELIASGRE+LASVPSGGG AVA AA GGGG A A AA E KKEEK E 
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
         EESD+++GFSLFD
Subjt:  KEESDDDMGFSLFD

P46252 60S acidic ribosomal protein P2A6.5e-3377.19Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MK VAAYLLAVL GNASPSA DL  IL SVG EVD +K+ELL+S + GKDITELIA+GREK ASVP GGG  VAVAAA    G AAP AAE+KKEEKVEE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLFD
Subjt:  KEESDDDMGFSLFD

P51407 60S acidic ribosomal protein P2-19.1e-3575Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA--GGGGGAAAPAAAESKKEEKV
        MK+VAA+LLAVL G ASP+  D+KDILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  AP AAESKKEEK 
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA--GGGGGAAAPAAAESKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

Q9LXM8 60S acidic ribosomal protein P2-45.9e-3472.81Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MK+ AA+LLAVLGGNA+PSA ++KDI+G+VGA+VD + IELL+  V GKDI ELIASGREKLASVPSGGG AV+ A + GGGGAAAPA    KKE K EE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLF+
Subjt:  KEESDDDMGFSLFD

Q9SLF7 60S acidic ribosomal protein P2-24.5e-3473.04Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G ASP++ D+K ILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

Arabidopsis top hitse value%identityAlignment
AT2G27710.1 60S acidic ribosomal protein family3.2e-3573.04Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G ASP++ D+K ILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.2 60S acidic ribosomal protein family3.2e-3573.04Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G ASP++ D+K ILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27710.3 60S acidic ribosomal protein family3.2e-3573.04Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE
        MK+VAAYLLAVL G ASP++ D+K ILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGG    +AAESKKEEK E
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA-GGGGGAAAPAAAESKKEEKVE

Query:  EKEESDDDMGFSLFD
        EKEESDDDMGFSLF+
Subjt:  EKEESDDDMGFSLFD

AT2G27720.1 60S acidic ribosomal protein family6.5e-3675Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA--GGGGGAAAPAAAESKKEEKV
        MK+VAA+LLAVL G ASP+  D+KDILGSVGAE ++ +IELL+  VKGKD+ ELIA+GREKLASVPSGGG  VAVA+A  GGGGG  AP AAESKKEEK 
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAA--GGGGGAAAPAAAESKKEEKV

Query:  EEKEESDDDMGFSLFD
        EEKEESDDDMGFSLF+
Subjt:  EEKEESDDDMGFSLFD

AT3G44590.2 60S acidic ribosomal protein family4.2e-3572.81Show/hide
Query:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE
        MK+ AA+LLAVLGGNA+PSA ++KDI+G+VGA+VD + IELL+  V GKDI ELIASGREKLASVPSGGG AV+ A + GGGGAAAPA    KKE K EE
Subjt:  MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEE

Query:  KEESDDDMGFSLFD
        KEESDDDMGFSLF+
Subjt:  KEESDDDMGFSLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAATCGTAGCTGCTTATTTGCTCGCTGTTTTGGGAGGCAATGCCAGCCCTTCTGCTAAGGATTTGAAGGATATTCTCGGATCTGTTGGAGCGGAAGTTGATGAGGA
CAAAATCGAGCTTCTGATGTCTAGTGTTAAGGGTAAGGATATTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGGAGGTGCCGCTGTGG
CAGTTGCCGCTGCTGGAGGTGGTGGCGGTGCGGCTGCCCCTGCTGCTGCAGAGTCAAAGAAAGAAGAGAAGGTTGAAGAGAAGGAGGAATCAGACGATGATATGGGCTTC
AGTCTTTTCGATTAA
mRNA sequenceShow/hide mRNA sequence
AAGAATCAGAAACCCTACCTCTCGCCGCTATATAATATAATTTGAAGCCGTCGACTTCATTTACGGAACCCTAACTGAACTCTCTCATTTTCCTTCTCCTGATTCCGATT
GGCTTCTGGTAAGGATGAAAATCGTAGCTGCTTATTTGCTCGCTGTTTTGGGAGGCAATGCCAGCCCTTCTGCTAAGGATTTGAAGGATATTCTCGGATCTGTTGGAGCG
GAAGTTGATGAGGACAAAATCGAGCTTCTGATGTCTAGTGTTAAGGGTAAGGATATTACAGAGCTCATTGCATCCGGAAGAGAAAAGCTAGCATCTGTTCCTTCTGGTGG
AGGTGCCGCTGTGGCAGTTGCCGCTGCTGGAGGTGGTGGCGGTGCGGCTGCCCCTGCTGCTGCAGAGTCAAAGAAAGAAGAGAAGGTTGAAGAGAAGGAGGAATCAGACG
ATGATATGGGCTTCAGTCTTTTCGATTAAGTATAATTACAAAGTCGAATGTTCAGAGATTCTTCAAGATTTTAGATTGGAATTTTTGTTTTCACAATGTAGTCTTTTTCC
AACATTATCCCCGTGTTATGAGGAGCCGAATGTCGAATTTCTTTTCAGTTTATAAATTTAGTCTTAATTTTTTGGATGCTTTAAAACCAAACGCCTTTTTTATTATATCG
AAAACAAGGAATTGCTGCTGCTATGGCATGAATTCGAAAAATTGGAGGCCATTGTGAATTTTCTGTTGCAGTTCCCTCTCCAACAACTAAAGATCATTTGCACAATTAAT
CAAAAGAAGATTGACCCACTTTGGGTGGGGTGTCTTCTCGAGTTCTTTTGGTTCTTCACAAGGAGAAACAGCAAGG
Protein sequenceShow/hide protein sequence
MKIVAAYLLAVLGGNASPSAKDLKDILGSVGAEVDEDKIELLMSSVKGKDITELIASGREKLASVPSGGGAAVAVAAAGGGGGAAAPAAAESKKEEKVEEKEESDDDMGF
SLFD