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Carg01917 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01917
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:8639623..8640117
RNA-Seq ExpressionCarg01917
SyntenyCarg01917
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601207.1 hypothetical protein SDJN03_06440, partial [Cucurbita argyrosperma subsp. sororia]1.1e-6297.69Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSS SF LFKFPLHY ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQ
        IKWAELLIDPDPDNILAVALTGLLAWASVQ
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQ

KAG7032002.1 hypothetical protein SDJN02_06044, partial [Cucurbita argyrosperma subsp. argyrosperma]1.1e-78100Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_022957096.1 uncharacterized protein LOC111458579 [Cucurbita moschata]2.7e-7798.78Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHY ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGS GDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_022993576.1 uncharacterized protein LOC111489528 [Cucurbita maxima]5.2e-7395.12Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSL SSSSPF LSTRS LSF LFKFPLHY ESQI GKRKRF ALASNNDNGLGGNIKEREGERNGAKGS GDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

XP_023549272.1 uncharacterized protein LOC111807677 [Cucurbita pepo subsp. pepo]1.1e-7597.56Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSL SSSSPFSLSTRSSLSF LFKFPLHY ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNG DDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

TrEMBL top hitse value%identityAlignment
A0A1S3BFX0 uncharacterized protein LOC1034894071.2e-5176.79Show/hide
Query:  TMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYL----ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAK-GSNGDDDLRKERG
        TMLGFLTIP+Q KISPSL S     S+S+ SSL   L+KFPLH+     +  I   R+RFTA ASN +   GG+IKEREGERNGAK  SNG DDL+KERG
Subjt:  TMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYL----ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAK-GSNGDDDLRKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A5D3CD16 Uncharacterized protein4.7e-5176.65Show/hide
Query:  MLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYL----ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAK-GSNGDDDLRKERGP
        MLGFLTIP+Q KISPSL S     S+S+ SSL   L+KFPLH+     +  I   R+RFTA ASN +   GG+IKEREGERNGAK  SNG DDL+KERGP
Subjt:  MLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYL----ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAK-GSNGDDDLRKERGP

Query:  VFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        VFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  VFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1CF05 uncharacterized protein LOC1110101205.5e-5275.6Show/hide
Query:  MLGFLTIPYQWKISP--SLPSSSSPFSLSTRSSLSFSLFKFPLHY----LESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERG
        MLGF T+P QW  +    L S+ +P S S  S  +   FKF LHY      SQIP  R RFTA + N DNGLGGNIKEREGER GAKGSNG DDL+KERG
Subjt:  MLGFLTIPYQWKISP--SLPSSSSPFSLSTRSSLSFSLFKFPLHY----LESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERG

Query:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  PVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1GYA2 uncharacterized protein LOC1114585791.3e-7798.78Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHY ESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGS GDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

A0A6J1JWP5 uncharacterized protein LOC1114895282.5e-7395.12Show/hide
Query:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN
        MTMLGFLTIPYQWKISPSL SSSSPF LSTRS LSF LFKFPLHY ESQI GKRKRF ALASNNDNGLGGNIKEREGERNGAKGS GDDDLRKERGPVFN
Subjt:  MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFN

Query:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
        IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL
Subjt:  IKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G40045.1 unknown protein1.6e-1656.19Show/hide
Query:  LASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFI
        L +N  NG   + KE  G  N    ++  +  +K++   F+ KW ELL +PD DN +AV L G+L WAS+QVL QLFFIS AILVAALKYSFIAALLIFI
Subjt:  LASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFNIKWAELLIDPDPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFI

Query:  LITLL
        L+TLL
Subjt:  LITLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCCCTTCATCTTCATCACCTTTTTCCCTCTCAACGAGATCTTCCCTCTCCTTTTC
ACTCTTCAAATTCCCTCTCCATTACTTGGAATCTCAAATTCCTGGTAAACGCAAAAGATTCACGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGAAATATCAAGG
AGAGAGAAGGAGAAAGAAATGGAGCGAAGGGCTCCAATGGCGACGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCG
GATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGTTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCT
TAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG
mRNA sequenceShow/hide mRNA sequence
ATGACAATGTTAGGGTTTCTTACTATCCCATACCAATGGAAGATTTCCCCATCTCTCCCTTCATCTTCATCACCTTTTTCCCTCTCAACGAGATCTTCCCTCTCCTTTTC
ACTCTTCAAATTCCCTCTCCATTACTTGGAATCTCAAATTCCTGGTAAACGCAAAAGATTCACGGCGTTGGCGAGTAATAACGACAATGGATTGGGCGGAAATATCAAGG
AGAGAGAAGGAGAAAGAAATGGAGCGAAGGGCTCCAATGGCGACGATGACTTGAGGAAAGAACGAGGGCCGGTTTTCAATATCAAATGGGCTGAACTCTTAATCGATCCG
GATCCTGATAACATCTTGGCCGTGGCGTTGACTGGCTTGCTTGCTTGGGCAAGTGTTCAGGTTTTGTGGCAGTTATTCTTCATCTCTTTGGCTATTTTAGTGGCTGCTCT
TAAGTACTCTTTTATTGCTGCGCTTCTTATTTTCATTCTAATTACATTACTATAG
Protein sequenceShow/hide protein sequence
MTMLGFLTIPYQWKISPSLPSSSSPFSLSTRSSLSFSLFKFPLHYLESQIPGKRKRFTALASNNDNGLGGNIKEREGERNGAKGSNGDDDLRKERGPVFNIKWAELLIDP
DPDNILAVALTGLLAWASVQVLWQLFFISLAILVAALKYSFIAALLIFILITLL