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Carg01920 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01920
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionUnknown protein
Genome locationCarg_Chr04:8596298..8596917
RNA-Seq ExpressionCarg01920
SyntenyCarg01920
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601203.1 hypothetical protein SDJN03_06436, partial [Cucurbita argyrosperma subsp. sororia]2.0e-54100Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

KAG7031999.1 hypothetical protein SDJN02_06041, partial [Cucurbita argyrosperma subsp. argyrosperma]2.0e-54100Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

XP_022957161.1 uncharacterized protein LOC111458630 [Cucurbita moschata]3.7e-5398.04Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MVDNRDIVPTNPQLTWSWSWSRNLNKLGDN+QQTSPLPPRKPNLVTLPGSEV PPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

XP_022985696.1 uncharacterized protein LOC111483672 [Cucurbita maxima]1.4e-3976.47Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MV+ RDIVPTNP++  +W W RN +K GDN+++ SP+PP+KPN+VTLPGSEV PPPPL AECKRPGKFSHPAIRW LYALGGF+IARWALK+WKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

XP_023553666.1 uncharacterized protein LOC111811149 [Cucurbita pepo subsp. pepo]4.3e-4993.14Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MVDNRDIVPT+P++T  WSWSRNLNKLGDNQQQTSPLPP+KPNLVTLPGS+VPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

TrEMBL top hitse value%identityAlignment
A0A0A0KRF3 Uncharacterized protein8.2e-1447.62Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRN----LNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSG
        M +N + +  NP+L    S+ RN    LN + D +++   LP  K  +VT+P  EV PPPP+ AE K  GKFSHPAI W L ALGGF I ++A KKWK  
Subjt:  MVDNRDIVPTNPQLTWSWSWSRN----LNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSG

Query:  EDEGK
        +DE K
Subjt:  EDEGK

A0A1S3BGK5 uncharacterized protein LOC1034894151.0e-1649.5Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        M +N++ +  NP+L  S+  + N  K+ D Q++    PP KP++VT+P S V  PPP+ AE K PGKFSHPA+ WPL ALGGFLI  WA +KW+  +DE 
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  K
        K
Subjt:  K

A0A6J1CDG9 uncharacterized protein LOC1110102184.8e-1457.5Show/hide
Query:  KLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWK----SGEDEGK
        KLGD  +  S     KPN+V +P  +V  PPPLTAE K P KFSHPAIRWPLY+LGG+LI RWA  +WK     G+D+GK
Subjt:  KLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWK----SGEDEGK

A0A6J1GYG5 uncharacterized protein LOC1114586301.8e-5398.04Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MVDNRDIVPTNPQLTWSWSWSRNLNKLGDN+QQTSPLPPRKPNLVTLPGSEV PPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

A0A6J1J8Z1 uncharacterized protein LOC1114836726.7e-4076.47Show/hide
Query:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG
        MV+ RDIVPTNP++  +W W RN +K GDN+++ SP+PP+KPN+VTLPGSEV PPPPL AECKRPGKFSHPAIRW LYALGGF+IARWALK+WKSGEDEG
Subjt:  MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEG

Query:  KN
        KN
Subjt:  KN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTTGACAACAGAGACATTGTTCCTACAAACCCTCAACTGACCTGGTCCTGGTCCTGGTCAAGAAATCTCAATAAATTAGGGGACAACCAACAACAAACTTCACCACT
GCCACCTCGGAAACCTAACCTCGTCACTCTTCCGGGATCGGAAGTGCCTCCTCCTCCGCCGTTGACGGCTGAGTGCAAGCGCCCTGGCAAGTTTTCGCATCCGGCAATCC
GGTGGCCGTTATATGCTTTGGGAGGATTCCTTATTGCGAGGTGGGCTTTGAAAAAATGGAAATCTGGGGAGGACGAAGGCAAAAACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTTGACAACAGAGACATTGTTCCTACAAACCCTCAACTGACCTGGTCCTGGTCCTGGTCAAGAAATCTCAATAAATTAGGGGACAACCAACAACAAACTTCACCACT
GCCACCTCGGAAACCTAACCTCGTCACTCTTCCGGGATCGGAAGTGCCTCCTCCTCCGCCGTTGACGGCTGAGTGCAAGCGCCCTGGCAAGTTTTCGCATCCGGCAATCC
GGTGGCCGTTATATGCTTTGGGAGGATTCCTTATTGCGAGGTGGGCTTTGAAAAAATGGAAATCTGGGGAGGACGAAGGCAAAAACTAA
Protein sequenceShow/hide protein sequence
MVDNRDIVPTNPQLTWSWSWSRNLNKLGDNQQQTSPLPPRKPNLVTLPGSEVPPPPPLTAECKRPGKFSHPAIRWPLYALGGFLIARWALKKWKSGEDEGKN