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Carg01927 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01927
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptioncyclin-dependent protein kinase inhibitor SMR1-like
Genome locationCarg_Chr04:8552263..8552655
RNA-Seq ExpressionCarg01927
SyntenyCarg01927
Gene Ontology termsGO:0032875 - regulation of DNA endoreduplication (biological process)
GO:0045839 - negative regulation of mitotic nuclear division (biological process)
GO:0005634 - nucleus (cellular component)
InterPro domainsIPR040389 - Cyclin-dependent protein kinase inhibitor SMR


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_011655851.1 cyclin-dependent protein kinase inhibitor SMR1 [Cucumis sativus]4.5e-5178.36Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFV
        MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R+D  DGGAEEL CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFV
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFV

Query:  EIVSREEIEPYFTSSFDHENRVKKSAKISFCECK
        EIV R+EIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  EIVSREEIEPYFTSSFDHENRVKKSAKISFCECK

XP_022957068.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita moschata]2.2e-66100Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPYFTSSFDHENRVKKSAKISFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

XP_022992922.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita maxima]1.1e-6599.23Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGG EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPYFTSSFDHENRVKKSAKISFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

XP_023531359.1 cyclin-dependent protein kinase inhibitor SMR1-like [Cucurbita pepo subsp. pepo]7.1e-6598.46Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKER D IDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPYFTSSFDHENRVKKSAKISFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

XP_038893025.1 cyclin-dependent protein kinase inhibitor SMR1-like [Benincasa hispida]9.0e-5281.54Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLE+VRRP IKLQIP P +SMA DHGGVIIQK+RI + +   EELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVEIV+
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

TrEMBL top hitse value%identityAlignment
A0A0A0KRI0 Uncharacterized protein2.2e-5178.36Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFV
        MST+LDLRRTLLE+VRRP IKLQIP P +S +     DHGGVIIQK+R+D  DGGAEEL CRTPTSAENKIP V QCPPAPRKRKRPP+CRRRL+ELEFV
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMA----ADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFV

Query:  EIVSREEIEPYFTSSFDHENRVKKSAKISFCECK
        EIV R+EIEPY  SSFDHE+RV+KSAK SFCECK
Subjt:  EIVSREEIEPYFTSSFDHENRVKKSAKISFCECK

A0A1S3BFF9 cyclin-dependent protein kinase inhibitor SMR1-like8.2e-5178.95Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSS--MAADHGGVIIQKERID-NIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVE
        MST+LDLRRTLLE+VRRP IKLQIP P ++  M  D GGVIIQK+RID   DGGAEELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVE
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSS--MAADHGGVIIQKERID-NIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVE

Query:  IVSREEIEPYFTSSFDHENRVKKSAKISFCECK
        IV R+EIEPY  +SFDHE+RV+KSAK SFCECK
Subjt:  IVSREEIEPYFTSSFDHENRVKKSAKISFCECK

A0A5D3CD68 Cyclin-dependent protein kinase inhibitor SMR1-like8.2e-5178.95Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSS--MAADHGGVIIQKERID-NIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVE
        MST+LDLRRTLLE+VRRP IKLQIP P ++  M  D GGVIIQK+RID   DGGAEELCCRTPTSAENKIP V+QCPPAPRKRKRPP+CRRRL+ELEFVE
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSS--MAADHGGVIIQKERID-NIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVE

Query:  IVSREEIEPYFTSSFDHENRVKKSAKISFCECK
        IV R+EIEPY  +SFDHE+RV+KSAK SFCECK
Subjt:  IVSREEIEPYFTSSFDHENRVKKSAKISFCECK

A0A6J1GZ63 cyclin-dependent protein kinase inhibitor SMR1-like1.1e-66100Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPYFTSSFDHENRVKKSAKISFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

A0A6J1JRA3 cyclin-dependent protein kinase inhibitor SMR1-like5.3e-6699.23Show/hide
Query:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
        MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGG EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS
Subjt:  MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVS

Query:  REEIEPYFTSSFDHENRVKKSAKISFCECK
        REEIEPYFTSSFDHENRVKKSAKISFCECK
Subjt:  REEIEPYFTSSFDHENRVKKSAKISFCECK

SwissProt top hitse value%identityAlignment
Q29Q81 Cyclin-dependent protein kinase inhibitor SMR66.6e-0553.85Show/hide
Query:  EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLI
        EE C  TPT+ E KIP +L+CPPAPRKR+    CR  ++
Subjt:  EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLI

Q9LPP4 Cyclin-dependent protein kinase inhibitor SMR12.4e-0733.7Show/hide
Query:  KERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK
        K + D  D   ++L C TPTS E+KIP V+  PP P ++ RPP             +C+R+L+      I++REEI+ +F+S ++  +   K
Subjt:  KERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK

Q9LZ60 Cyclin-dependent protein kinase inhibitor SMR34.3e-0443.59Show/hide
Query:  EELCCRTPTSAENKIPVV--LQCPPAPRKRK--RPPTCRRRLIELEFVE---IVSREEIEPYFTSSFDHENRVKKSAK
        EE  C+TPTS+++KIP V    CPPAPRK K  R    +R+L  +  V    I    EIE +F    D + R+KKS K
Subjt:  EELCCRTPTSAENKIPVV--LQCPPAPRKRK--RPPTCRRRLIELEFVE---IVSREEIEPYFTSSFDHENRVKKSAK

Arabidopsis top hitse value%identityAlignment
AT1G60783.1 unknown protein5.7e-0458.62Show/hide
Query:  EELCCRTPTSAENKIPVVLQCPPAPRKRK
        E+LC  TPT+   +IP V+ CPPAP+KRK
Subjt:  EELCCRTPTSAENKIPVVLQCPPAPRKRK

AT2G37610.1 unknown protein3.3e-0453.85Show/hide
Query:  RTPTSAENKIPVVLQCPPAPRKRK------RPPTCRRRL
        +TPT  EN+IP+V +CPPAP KR       R   CRRRL
Subjt:  RTPTSAENKIPVVLQCPPAPRKRK------RPPTCRRRL

AT3G10525.1 LOSS OF GIANT CELLS FROM ORGANS1.7e-0833.7Show/hide
Query:  KERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK
        K + D  D   ++L C TPTS E+KIP V+  PP P ++ RPP             +C+R+L+      I++REEI+ +F+S ++  +   K
Subjt:  KERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPP-------------TCRRRLIELEFVEIVSREEIEPYFTSSFDHENRVKK

AT5G02420.1 unknown protein3.0e-0543.59Show/hide
Query:  EELCCRTPTSAENKIPVV--LQCPPAPRKRK--RPPTCRRRLIELEFVE---IVSREEIEPYFTSSFDHENRVKKSAK
        EE  C+TPTS+++KIP V    CPPAPRK K  R    +R+L  +  V    I    EIE +F    D + R+KKS K
Subjt:  EELCCRTPTSAENKIPVV--LQCPPAPRKRK--RPPTCRRRLIELEFVE---IVSREEIEPYFTSSFDHENRVKKSAK

AT5G40460.1 unknown protein4.7e-0653.85Show/hide
Query:  EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLI
        EE C  TPT+ E KIP +L+CPPAPRKR+    CR  ++
Subjt:  EELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTACAGACCTCGATCTCCGACGGACTTTGTTGGAAGTCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGGCCGTTGTCATCAATGGCAGCCGATCACGGCGG
TGTGATAATTCAGAAAGAGAGAATTGATAACATCGACGGCGGCGCTGAAGAATTATGCTGCCGCACGCCGACATCAGCAGAGAACAAGATTCCAGTGGTGCTACAATGTC
CGCCGGCGCCGCGGAAACGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATCGAGCTTGAATTCGTGGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTTACTTCG
AGTTTCGATCACGAAAACAGAGTAAAAAAATCTGCTAAAATAAGCTTCTGCGAGTGTAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTACAGACCTCGATCTCCGACGGACTTTGTTGGAAGTCGTCCGCCGTCCGGCGATCAAGCTTCAAATTCCACGGCCGTTGTCATCAATGGCAGCCGATCACGGCGG
TGTGATAATTCAGAAAGAGAGAATTGATAACATCGACGGCGGCGCTGAAGAATTATGCTGCCGCACGCCGACATCAGCAGAGAACAAGATTCCAGTGGTGCTACAATGTC
CGCCGGCGCCGCGGAAACGGAAGAGACCTCCGACTTGTAGAAGAAGACTAATCGAGCTTGAATTCGTGGAGATCGTGAGTAGAGAAGAGATCGAACCGTATTTTACTTCG
AGTTTCGATCACGAAAACAGAGTAAAAAAATCTGCTAAAATAAGCTTCTGCGAGTGTAAATGA
Protein sequenceShow/hide protein sequence
MSTDLDLRRTLLEVVRRPAIKLQIPRPLSSMAADHGGVIIQKERIDNIDGGAEELCCRTPTSAENKIPVVLQCPPAPRKRKRPPTCRRRLIELEFVEIVSREEIEPYFTS
SFDHENRVKKSAKISFCECK