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Carg01950 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01950
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionCytochrome c oxidase assembly protein cox16
Genome locationCarg_Chr04:8425447..8426640
RNA-Seq ExpressionCarg01950
SyntenyCarg01950
Gene Ontology termsGO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR020164 - Cytochrome c oxidase assembly protein COX16


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031970.1 hypothetical protein SDJN02_06012, partial [Cucurbita argyrosperma subsp. argyrosperma]1.0e-72100Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

XP_022956367.1 uncharacterized protein LOC111458129 [Cucurbita moschata]5.5e-6392.2Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

XP_022969704.1 uncharacterized protein LOC111468648 [Cucurbita maxima]1.6e-6291.49Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

XP_023533207.1 uncharacterized protein LOC111795161 [Cucurbita pepo subsp. pepo]1.2e-6291.49Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMF+RWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

XP_038891357.1 uncharacterized protein LOC120080793 isoform X2 [Benincasa hispida]1.4e-5885.82Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTE KK  S NNA R+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKV+DDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTD+TS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

TrEMBL top hitse value%identityAlignment
A0A1S4DWC3 uncharacterized protein LOC103489460 isoform X11.2e-5885.82Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMG+STE KK  SA+NAAR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQE+VDINNYEYKRIP+PTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

A0A5A7SXX4 Cytochrome c oxidase assembly protein cox164.4e-5076.81Show/hide
Query:  TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLE
        TEAGMG+STE KK  SA+NAAR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMR+ALSRTGPIDA+   ++ ++
Subjt:  TEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLE

Query:  EELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        +             ALQE+VDINNYEYKRIP+PTDRTS
Subjt:  EELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

A0A6J1CBH5 uncharacterized protein LOC1110100641.1e-5380.85Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTS E GM QS E  K  SA N AR+SPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGP+DAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKV+IN+YEYKRIPKP+ RTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

A0A6J1GWL5 uncharacterized protein LOC1114581292.7e-6392.2Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

A0A6J1HX89 uncharacterized protein LOC1114686487.8e-6391.49Show/hide
Query:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
        MTSTEAG+GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI
Subjt:  MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNI

Query:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        SLEEEL           ALQEKVDINNYEYKRIPKPTDRTS
Subjt:  SLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G14145.1 unknown protein3.4e-4260.84Show/hide
Query:  MTSTEAGM--GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK
        MT+ E G    +S+      +     + S + F+RWGRRHPF+RYGLPMISLTV GA+GLG LLQGSKDIAKVKDDQEWEI E RKALSRTGP+DAYKPK
Subjt:  MTSTEAGM--GQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPK

Query:  NISLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS
        N S+E+EL+          A+QEKVDIN YEYK+IPK  +  S
Subjt:  NISLEEELEGITLIHCNSFALQEKVDINNYEYKRIPKPTDRTS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTCTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAG
ACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACCGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATG
ATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTTGAGGGTATTACT
CTTATTCATTGCAACTCATTTGCTTTACAAGAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACCAGCACTGAGGCAGGAATGGGTCAGTCTACAGAACAAAAGAAGAGTGTCTCTGCCAACAATGCAGCTCGGTCGTCTCCATCCATGTTTAGAAGATGGGGTAGAAG
ACACCCATTTATCAGATATGGACTTCCAATGATCTCTCTCACCGTGCTTGGGGCAGTTGGTCTTGGTCATCTCTTGCAAGGAAGTAAAGATATTGCAAAGGTGAAAGATG
ATCAAGAATGGGAGATCACTGAGATGAGAAAAGCCCTGTCAAGAACGGGACCTATTGACGCGTATAAGCCGAAAAATATATCGTTAGAAGAAGAACTTGAGGGTATTACT
CTTATTCATTGCAACTCATTTGCTTTACAAGAGAAGGTAGACATCAACAACTATGAATACAAGAGAATTCCAAAGCCCACTGATCGAACATCCTGAAAATTAGCCCTCCA
AAAGTTGCATACAACACCAGTTCAGGTATTTTGTATCCTCACTTGTAATTCCTTTTGAAGATTATGAATAAACATCCTTTTCGAATGAGCAGAATGTTCCCTTTTTTGAG
TTTTGTTTCAACCTTTTGGAATTTTTTATGCTCATCTTTTCTCTACATATTGCTGTGACCTCTTTGTTTCAACCTTTTTATGCTTATTTATTTAATTGTTTTTTTGTAAA
AAAAATTATTGTTTTTAATTTTAGAAACGATAATAAAATTGTGACTTT
Protein sequenceShow/hide protein sequence
MTSTEAGMGQSTEQKKSVSANNAARSSPSMFRRWGRRHPFIRYGLPMISLTVLGAVGLGHLLQGSKDIAKVKDDQEWEITEMRKALSRTGPIDAYKPKNISLEEELEGIT
LIHCNSFALQEKVDINNYEYKRIPKPTDRTS