CuGenDBv2

Gene ID	Carg01989
Organism	Cucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Description	cytochrome c oxidase assembly factor 5
Genome location	Carg_Chr04:8201024..8202594
RNA-Seq Expression	Carg01989
Synteny	Carg01989
Gene Ontology terms	GO:0033617 - mitochondrial respiratory chain complex IV assembly (biological process) GO:0005739 - mitochondrion (cellular component)
InterPro domains	IPR018793 - Cytochrome c oxidase assembly protein PET191

Homology

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GenBank top hits

e value

%identity

Alignment

ADN34196.1 hypothetical protein [Cucumis melo subsp. melo]

1.6e-25

98.28

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ

KAG7031931.1 hypothetical protein SDJN02_05973 [Cucurbita argyrosperma subsp. argyrosperma]

4.9e-30

100

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFRELLL
        MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFRELLL
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFRELLL

RZB77226.1 hypothetical protein D0Y65_035243 [Glycine soja]

8.1e-25

93.33

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQAS
        MSKSCKGLAMELVKCLSESDCVKV+ R+YKEC GEKSPCIPSECVGLRETYFNCKRGQAS
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQAS

XP_008446948.1 PREDICTED: cytochrome c oxidase assembly factor 5 [Cucumis melo]

4.3e-26

93.55

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

XP_022956695.1 cytochrome c oxidase assembly factor 5 [Cucurbita moschata]

1.9e-26

95.16

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KRS4 Uncharacterized protein

2.1e-26

93.55

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

A0A1S3BGA9 cytochrome c oxidase assembly factor 5

2.1e-26

93.55

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

A0A6J1CDL1 cytochrome c oxidase assembly factor 5

2.1e-26

93.55

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTY+ECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

A0A6J1GYH3 cytochrome c oxidase assembly factor 5

9.4e-27

95.16

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

A0A6J1IEJ6 cytochrome c oxidase assembly factor 5

9.4e-27

95.16

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

SwissProt top hits

e value

%identity

Alignment

O42921 Mitochondrial protein pet191 homolog

2.0e-05

41.07

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKR
        M +SCK +  +L  CL  SDC+ V+ ++ +EC   K   +P EC  L E Y  CKR
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKR

Arabidopsis top hits

e value

%identity

Alignment

AT1G10865.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 241 Blast hits to 241 proteins in 124 species: Archae - 0; Bacteria - 0; Metazoa - 100; Fungi - 94; Plants - 38; Viruses - 0; Other Eukaryotes - 9 (source: NCBI BLink).

7.3e-24

77.42

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR
        M+KSCKGLA ELVKCLSES CVK + R+ ++C GEKSPCIPSECVGLRETYFNCKRGQ   R
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFR

AT1G10865.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase assembly protein PET191, N-terminal (InterPro:IPR018793); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

2.8e-23

81.03

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Query:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ
        M+KSCKGLA ELVKCLSES CVK + R+ ++C GEKSPCIPSECVGLRETYFNCKRGQ
Subjt:  MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQ

Sequences

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CDS sequence

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ATGTCGAAGTCTTGCAAAGGTTTAGCGATGGAACTGGTCAAGTGTCTCAGCGAATCAGATTGTGTAAAGGTCCAGAACCGAACTTACAAGGAATGTGCTGGAGAGAAGAG
TCCTTGCATTCCTAGCGAATGCGTGGGATTAAGGGAAACATATTTCAATTGTAAAAGAGGCCAGGCAAGTTTTCGTGAACTCCTTCTCTAG

mRNA sequence

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AATTAACCTTCGTAGAAGGTCGTCACCCCTTCTTTCGCCTTATTCTTGTTCGTCGGGCGTTCACAGCAATCGGTAGTCGTCGTTTCCTCTCGCCAGTTAAGTCCTGCGAG
TAGAAAATCAGCTCGGTTGACATTTATCATTTATTGTCGAGAGGACGAAGCTGAATACTGTAAACGAAGATAATTGTGCTATTTCAAGTGAAGATTCAAGGCATAACAGG
AATCTTTGAGGTGGGTGAAATTAAGGGGAAGGATGTCGAAGTCTTGCAAAGGTTTAGCGATGGAACTGGTCAAGTGTCTCAGCGAATCAGATTGTGTAAAGGTCCAGAAC
CGAACTTACAAGGAATGTGCTGGAGAGAAGAGTCCTTGCATTCCTAGCGAATGCGTGGGATTAAGGGAAACATATTTCAATTGTAAAAGAGGCCAGGCAAGTTTTCGTGA
ACTCCTTCTCTAGCCTCATGCAGGCGTTCATTTTTTGTTTAAGTAGATCTCAATCATGCTACTGGTGCTTCAAAGTATTCTAAAATACACCTCATGATCCAACAACATGG
CAACTCGTAGTTTAAACTTTTATGTGGTATTATATAATGTAAAGATTGGTCTTAAGATAGTGGACTGTGAATAGATGATTAGTCACTTCTTTATTTTCTCATCTCATTGG
GAAGTAGAGAGAACATCTGTGGGTGAAGCTATCCAAAAGGATATCCAAAGTAATGCTATAGGTGAATGTTGGAAATTTTTCTTGGAAATATATGCTAGGATTTTTGCCC

Protein sequence

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MSKSCKGLAMELVKCLSESDCVKVQNRTYKECAGEKSPCIPSECVGLRETYFNCKRGQASFRELLL

Carg01989 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome