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Carg01999 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg01999
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiontranscription factor IIIA isoform X1
Genome locationCarg_Chr04:8129590..8130504
RNA-Seq ExpressionCarg01999
SyntenyCarg01999
Gene Ontology termsNA
InterPro domainsIPR013087 - Zinc finger C2H2-type
IPR036236 - Zinc finger C2H2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7031921.1 Transcription factor IIIA, partial [Cucurbita argyrosperma subsp. argyrosperma]6.6e-46100Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

XP_022957350.1 transcription factor IIIA isoform X1 [Cucurbita moschata]1.9e-4598.88Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

XP_022957351.1 transcription factor IIIA isoform X2 [Cucurbita moschata]1.9e-4598.88Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

XP_023526833.1 transcription factor IIIA isoform X1 [Cucurbita pepo subsp. pepo]6.2e-4495.51Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLG+KP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFI +DEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

XP_023526840.1 transcription factor IIIA isoform X2 [Cucurbita pepo subsp. pepo]6.2e-4495.51Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLG+KP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFI +DEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

TrEMBL top hitse value%identityAlignment
A0A0A0KV54 Uncharacterized protein7.1e-3886.36Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEE
        MKVVHL QKP+ C FPGCGMRFGYKHVRDNHEK GQHVYTNGDFEAADEQFRSKPRGGRKRI PTVEMLIRKR+TPPSELDF+  +E+
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEE

A0A6J1GYZ5 transcription factor IIIA isoform X29.3e-4698.88Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

A0A6J1H0A5 transcription factor IIIA isoform X19.3e-4698.88Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC

A0A6J1JCM1 transcription factor IIIA isoform X21.1e-4396.67Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT-PPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT PPSELDFI MDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT-PPSELDFITMDEEC

A0A6J1JLR2 transcription factor IIIA isoform X11.1e-4396.67Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT-PPSELDFITMDEEC
        MKVVHLGQKP+ACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT PPSELDFI MDEEC
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRIT-PPSELDFITMDEEC

SwissProt top hitse value%identityAlignment
Q84MZ4 Transcription factor IIIA5.6e-2463.64Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP
        MK VH   +P+ CGFPGCGMRF YKHVR+ HE  G HVYT GDF   DE F S+PRGG KR + T EML+RKR+ PP
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP

Arabidopsis top hitse value%identityAlignment
AT1G72050.1 transcription factor IIIA4.0e-2563.64Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP
        MK VH   +P+ CGFPGCGMRF YKHVR+ HE  G HVYT GDF   DE F S+PRGG KR + T EML+RKR+ PP
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP

AT1G72050.2 transcription factor IIIA4.0e-2563.64Show/hide
Query:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP
        MK VH   +P+ CGFPGCGMRF YKHVR+ HE  G HVYT GDF   DE F S+PRGG KR + T EML+RKR+ PP
Subjt:  MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGTCGTGCATCTTGGTCAAAAACCGTATGCTTGTGGTTTCCCTGGTTGTGGCATGAGATTTGGCTACAAGCATGTTCGAGATAATCATGAGAAGAAGGGCCAGCA
TGTTTACACTAATGGGGATTTTGAAGCAGCTGATGAACAATTCCGGTCAAAGCCTAGGGGAGGGAGAAAAAGGATCCGTCCAACCGTTGAAATGCTTATAAGGAAGAGGA
TTACCCCCCCAAGTGAGTTGGATTTCATCACGATGGATGAGGAATGTTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGGTCGTGCATCTTGGTCAAAAACCGTATGCTTGTGGTTTCCCTGGTTGTGGCATGAGATTTGGCTACAAGCATGTTCGAGATAATCATGAGAAGAAGGGCCAGCA
TGTTTACACTAATGGGGATTTTGAAGCAGCTGATGAACAATTCCGGTCAAAGCCTAGGGGAGGGAGAAAAAGGATCCGTCCAACCGTTGAAATGCTTATAAGGAAGAGGA
TTACCCCCCCAAGTGAGTTGGATTTCATCACGATGGATGAGGAATGTTAACTGTCTTGTCTGGTTTGTCTTAAGGCCTCTCTACTCGAAAGGAGACAACCCCTTTTGTTC
ATTAAATGTATAGAATCTGTATTTTACAATGTAATCCCTCCCCTTACCACAAGCAAAATATAGAAGACTCGTGTACTTTTTGTGTTCATTGGCAGTAAAATCCTGGAGTT
CTTGGTTCCTGAAGAAATTCTTACATGTCTTCATGGCCTCGAGCAATGGCCAGTCGTCTGCTGTTTCACGAAGTGTTTCTTTTGGTTTCTATGAGTTCAACAAGACGTGA
GGACTTTAAATCATGGACATTGATTGTCCATATCATAACGTTGATTGCCTTGCCTAACATGTTGGCATCCCAAAATTGCAAGAAAAAGAACCTTTTGGAGAGAGAGAACG
TGTGAGCATCTTTTGACTTTTGGTTAGAATTTTTATAAATGTATAAGCCACGGATGAGGAATGTATATGTAATAAGTGCATATTCCAATCTTAGCCTCCCCATTAGGTTT
GATCGATCTGGCTCCAACTCTAGTTTGATCCGAGCTCGACCAAAGTCAAAGTTTGACC
Protein sequenceShow/hide protein sequence
MKVVHLGQKPYACGFPGCGMRFGYKHVRDNHEKKGQHVYTNGDFEAADEQFRSKPRGGRKRIRPTVEMLIRKRITPPSELDFITMDEEC