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Carg02012 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02012
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
DescriptionF-box protein At2g35280-like
Genome locationCarg_Chr04:8050552..8050988
RNA-Seq ExpressionCarg02012
SyntenyCarg02012
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601104.1 putative F-box protein, partial [Cucurbita argyrosperma subsp. sororia]9.8e-3965.91Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGMAYLKLSAQK Y EACYVYGIILY TSLED GVKFLKICE                        NKISL E D G +R C++VVKN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RI WD ND DDYYGEH CEACKWNEE
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

KAG6601109.1 Carbamoyl-phosphate synthase small chain, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.3e-4275.61Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGMAYLKLSAQKSYLEACYVYGIILYPTSLED GVKF KICE                        NKISL E+DFGGRRNCKSVVKNS
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHA
        CKKKVKRIRWDGNDGDDYYGEHA
Subjt:  CKKKVKRIRWDGNDGDDYYGEHA

KAG7031908.1 hypothetical protein SDJN02_05950, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-59100Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICENKISLLEEDFGGRRNCKSVVKNSCKKKVKRIRWDGNDGDDYYGEHAC
        MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICENKISLLEEDFGGRRNCKSVVKNSCKKKVKRIRWDGNDGDDYYGEHAC
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICENKISLLEEDFGGRRNCKSVVKNSCKKKVKRIRWDGNDGDDYYGEHAC

Query:  EACKWNEENREL
        EACKWNEENREL
Subjt:  EACKWNEENREL

XP_022990439.1 uncharacterized protein LOC111487294 [Cucurbita maxima]4.0e-4065.91Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGM YLKL AQK Y E CYVY IILY TSLED GVKFLKICE                        N I L E+DFG RR C+SVVKN+
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RIRWDGNDGDDYYGEH CEACKWNEE
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

XP_023549584.1 putative F-box protein At1g67623 [Cucurbita pepo subsp. pepo]9.8e-3965.91Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGMAYLKLSAQK Y EACYVYGIILY  SLED GVKFLKICE                        NKISL E+D   +R C+SVVKN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RI WDGND DDYYGEH CEACKWNEE
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

TrEMBL top hitse value%identityAlignment
A0A6J1GYN4 putative F-box protein At1g676236.4e-3661.36Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGMAYLKLSAQK Y +ACYVYGIILY  S+ED GVKFLKICE                        NKI +LE D   RR C+SV+KN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+R  WD ND DDYYGEH CEACKWN E
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

A0A6J1GZQ6 F-box protein At2g35280-like1.1e-3561.36Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGMAYLKLSAQK Y +ACYVYGIILY TS+ED GVKFLKICE                        NKI +LE D   RR C+SV+KN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        C+K V+RI  D ND DDYYGEH CEACKWN E
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

A0A6J1H022 putative F-box protein At1g676231.5e-3763.64Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFT+ REASGMAYLKLSAQK Y EACYVYGIILY  S ED GVKFLKICE                        NKISL ++D   +R C+SVVKN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RI WDGND DDYYGEH CEACKWNEE
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

A0A6J1JRX4 putative F-box protein At1g676231.6e-3459.09Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGM YLK+SAQK Y EACYVYGIILY TS+ED GVKFLKICE                        NKIS+ E+    RR C++V+KN 
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RI WD ND D+YYGE+ CEACKWN E
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

A0A6J1JS19 uncharacterized protein LOC1114872941.9e-4065.91Show/hide
Query:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS
        ML+FFTH REASGM YLKL AQK Y E CYVY IILY TSLED GVKFLKICE                        N I L E+DFG RR C+SVVKN+
Subjt:  MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICE------------------------NKISLLEEDFGGRRNCKSVVKNS

Query:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE
        CKK V+RIRWDGNDGDDYYGEH CEACKWNEE
Subjt:  CKKKVKRIRWDGNDGDDYYGEHACEACKWNEE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGAAATTCTTCACTCATGGTAGAGAAGCTTCTGGAATGGCATATCTTAAGCTTTCTGCCCAAAAAAGCTACCTGGAAGCTTGTTATGTATATGGCATCATTTTGTA
CCCAACGAGTTTGGAGGATGCGGGAGTGAAGTTCTTGAAGATTTGTGAGAACAAGATTTCTTTGTTGGAAGAGGATTTTGGTGGCCGGAGGAACTGTAAGAGTGTAGTTA
AGAATAGTTGTAAGAAGAAAGTGAAAAGAATTAGATGGGATGGGAACGATGGAGATGATTATTATGGAGAACACGCGTGCGAAGCGTGTAAATGGAATGAGGAAAACCGG
GAGTTATGA
mRNA sequenceShow/hide mRNA sequence
ATGCTGAAATTCTTCACTCATGGTAGAGAAGCTTCTGGAATGGCATATCTTAAGCTTTCTGCCCAAAAAAGCTACCTGGAAGCTTGTTATGTATATGGCATCATTTTGTA
CCCAACGAGTTTGGAGGATGCGGGAGTGAAGTTCTTGAAGATTTGTGAGAACAAGATTTCTTTGTTGGAAGAGGATTTTGGTGGCCGGAGGAACTGTAAGAGTGTAGTTA
AGAATAGTTGTAAGAAGAAAGTGAAAAGAATTAGATGGGATGGGAACGATGGAGATGATTATTATGGAGAACACGCGTGCGAAGCGTGTAAATGGAATGAGGAAAACCGG
GAGTTATGA
Protein sequenceShow/hide protein sequence
MLKFFTHGREASGMAYLKLSAQKSYLEACYVYGIILYPTSLEDAGVKFLKICENKISLLEEDFGGRRNCKSVVKNSCKKKVKRIRWDGNDGDDYYGEHACEACKWNEENR
EL