; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Carg02024 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02024
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptionmediator of RNA polymerase II transcription subunit 15a-like
Genome locationCarg_Chr04:7973277..7979487
RNA-Seq ExpressionCarg02024
SyntenyCarg02024
Gene Ontology termsGO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:0003713 - transcription coactivator activity (molecular function)
GO:0031490 - chromatin DNA binding (molecular function)
InterPro domainsIPR044661 - Mediator of RNA polymerase II transcription subunit 15a/b/c-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601093.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. sororia]2.7e-16992.22Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        DPGATIGRSEGILVECSFGAVCTLSHLIS QTSAIQ LA+H + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

KAG7031897.1 Mediator of RNA polymerase II transcription subunit 15a, partial [Cucurbita argyrosperma subsp. argyrosperma]2.9e-184100Show/hide
Query:  MEKQEGSSTRIDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVS
        MEKQEGSSTRIDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVS
Subjt:  MEKQEGSSTRIDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVS

Query:  SSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEV
        SSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEV
Subjt:  SSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEV

Query:  SICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISE
        SICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISE
Subjt:  SICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISE

Query:  YARQNGGGSFSSKYGSWEDCLHTAWS
        YARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  YARQNGGGSFSSKYGSWEDCLHTAWS

XP_022956517.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita moschata]3.1e-17092.51Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQ LA+H + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

XP_022984739.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita maxima]2.5e-16791.02Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALE+FLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        DP ATIG+SEGILVECSFGAVCTLSHLISHQTSAIQ LA+  + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISE+ARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

XP_023526658.1 mediator of RNA polymerase II transcription subunit 15a-like [Cucurbita pepo subsp. pepo]2.3e-16590.42Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRV SSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGT GSRRTRHYRCLMDCEGFDLSSLFTQRSRI ETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        D  ATIGRSEGILVECSFGAVCTLSHLIS QTSA+Q LA+H + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

TrEMBL top hitse value%identityAlignment
A0A2C9UYW6 KIX_2 domain-containing protein1.9e-5141.8Show/hide
Query:  VSTPGMSPSSLLEEVTDSDRDNDKCCVT----------PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLR-R
        + TPG+S S LL E T SD  +     T          PL+RLIK V  MSPKALSASVSDI S+V M DR++ SAP N S+ AVG DL      R++ R
Subjt:  VSTPGMSPSSLLEEVTDSDRDNDKCCVT----------PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLR-R

Query:  KCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFS--------LPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGR
         C    G  G+R+ R Y   M       +S  +   + +  P+ S+    +        +    +LLEEIR IN++LI T V I ++D+  T  G+  G 
Subjt:  KCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFS--------LPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGR

Query:  SEGILVECSFGAVCTLSHL----ISHQTSAIQNLALHF----------------VNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVI
         EG +V+CSF AV    +L     S Q S IQ L L                  V I    EDLS++A+ +F++S+RSL+ P S+ E+ARTWD+CAR VI
Subjt:  SEGILVECSFGAVCTLSHL----ISHQTSAIQNLALHF----------------VNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVI

Query:  SEYARQNGGGSFSSKYGSWEDCL
        SE+A+Q+GGGSFSSKYG+WE+CL
Subjt:  SEYARQNGGGSFSSKYGSWEDCL

A0A6J1CCM7 mediator of RNA polymerase II transcription subunit 15a-like isoform X12.2e-11364.37Show/hide
Query:  EKALENFLYP-------PIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLN
        E A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKALSAS+SDIDSIVCMTDRV+SSAPLN
Subjt:  EKALENFLYP-------PIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLN

Query:  KSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRH---------YRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIY
        KSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+W GFSLP KQ LLEEIR+INEQLI 
Subjt:  KSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRH---------YRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIY

Query:  TEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI---------------------PTGCEDLSLQAREKFNMSVRS
        T VS+CDKDM+TTD  AT  RSEGI+VECSF A+   S+ IS Q SA+Q L +H + +                     PT CE+LSL+ REKFNM VRS
Subjt:  TEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI---------------------PTGCEDLSLQAREKFNMSVRS

Query:  LAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA
        L HPFSISEVARTWD CAR+V+SE+A++NGGGSF+SKYGSWEDCLH A
Subjt:  LAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA

A0A6J1CEI3 mediator of RNA polymerase II transcription subunit 15a-like isoform X28.6e-8166.54Show/hide
Query:  EKALENFLYP-------PIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLN
        E A ++FL+         IVNDA Q EK FI+STPGMSPS+LLEEV++SDRDND C VTPLQRL+KMVNVMSPKALSAS+SDIDSIVCMTDRV+SSAPLN
Subjt:  EKALENFLYP-------PIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLN

Query:  KSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRH---------YRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIY
        KSK  +  DL GTV SRLR++CS FGG+ GSRRTRH          R +M CE +DL+S FT+RSR IETP+HS+W GFSLP KQ LLEEIR+INEQLI 
Subjt:  KSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRH---------YRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIY

Query:  TEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALH
        T VS+CDKDM+TTD  AT  RSEGI+VECSF A+   S+ IS Q SA+Q L +H
Subjt:  TEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALH

A0A6J1GWK1 mediator of RNA polymerase II transcription subunit 15a-like1.5e-17092.51Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQ LA+H + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

A0A6J1JBE6 mediator of RNA polymerase II transcription subunit 15a-like1.2e-16791.02Show/hide
Query:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
        +DFEKALE+FLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
Subjt:  IDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG

Query:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
        AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT
Subjt:  AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTT

Query:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM
        DP ATIG+SEGILVECSFGAVCTLSHLISHQTSAIQ LA+  + +                  PTGCEDLSLQAREKFNMSVRSLAHPFSISE+ARTWDM
Subjt:  DPGATIGRSEGILVECSFGAVCTLSHLISHQTSAIQNLALHFVNI------------------PTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDM

Query:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
        CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS
Subjt:  CARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS

SwissProt top hitse value%identityAlignment
F4I169 Probable mediator of RNA polymerase II transcription subunit 15b2.1e-0734Show/hide
Query:  VSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRK
        + TPG+S S LL E+T  D +                 P++RLI+ +  +SP+ALS++V DI S+V M DR++ S P   S+ + G+DL       L+ +
Subjt:  VSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRK

F4I171 Mediator of RNA polymerase II transcription subunit 15a8.6e-3835.98Show/hide
Query:  KAFIVSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASR
        ++  + TPG+S S LL+E T  D +                 P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S+ +VG DL      R
Subjt:  KAFIVSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASR

Query:  LR-RKCSRFGGTIGSRRTRHYRCLMDCE--------GFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPG-
        L+ R      G + +++ + +   M           G +        +  +E+   S+        + +LLEEI+ IN++LI T V I D D    DP  
Subjt:  LR-RKCSRFGGTIGSRRTRHYRCLMDCE--------GFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPG-

Query:  ---ATIGRSEGILVECSFGAV----CTLSHLISHQTSAIQNLALHF-VNIPTGC---------------EDLSLQAREKFNMSVRSLAHPFSISEVARTW
           ++IG  EG  V  SF AV       +HL S Q S IQ L L    + P G                EDLS +A  +FN+ +RSL+ P S+ ++A+TW
Subjt:  ---ATIGRSEGILVECSFGAV----CTLSHLISHQTSAIQNLALHF-VNIPTGC---------------EDLSLQAREKFNMSVRSLAHPFSISEVARTW

Query:  DMCARDVISEYARQNGGGSFSSKYGSWE
        D CAR VI EYA+Q GGG+FSSKYG+WE
Subjt:  DMCARDVISEYARQNGGGSFSSKYGSWE

Q9SHV7 Probable mediator of RNA polymerase II transcription subunit 15c1.7e-2228.67Show/hide
Query:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS
        P+ RLIK     SPK+L+ SVS+I S++ M D +  S P   S G     L   ++ R R   +     +  R  R    +   M  +      L +  S
Subjt:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS

Query:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSA--------------IQNL
         ++ T   S     ++    +LL+EI+  N +L+ T V ICD+D            S G +V C++  V   +    H  S               IQ L
Subjt:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSA--------------IQNL

Query:  ALHF--------------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA
         L F              ++  T     EDLS + R +F++S++  + P     +A+TW+ CAR  + EYA ++GGG+FSSKYG+WE  L  +
Subjt:  ALHF--------------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA

Arabidopsis top hitse value%identityAlignment
AT1G15770.1 unknown protein1.5e-0834Show/hide
Query:  VSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRK
        + TPG+S S LL E+T  D +                 P++RLI+ +  +SP+ALS++V DI S+V M DR++ S P   S+ + G+DL       L+ +
Subjt:  VSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRK

AT1G15780.1 unknown protein6.1e-3935.98Show/hide
Query:  KAFIVSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASR
        ++  + TPG+S S LL+E T  D +                 P++RLI+ V  +SP+ALS++VSDI S+V M DR++ SAP N S+ +VG DL      R
Subjt:  KAFIVSTPGMSPSSLLEEVTDSDRD----------NDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASR

Query:  LR-RKCSRFGGTIGSRRTRHYRCLMDCE--------GFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPG-
        L+ R      G + +++ + +   M           G +        +  +E+   S+        + +LLEEI+ IN++LI T V I D D    DP  
Subjt:  LR-RKCSRFGGTIGSRRTRHYRCLMDCE--------GFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPG-

Query:  ---ATIGRSEGILVECSFGAV----CTLSHLISHQTSAIQNLALHF-VNIPTGC---------------EDLSLQAREKFNMSVRSLAHPFSISEVARTW
           ++IG  EG  V  SF AV       +HL S Q S IQ L L    + P G                EDLS +A  +FN+ +RSL+ P S+ ++A+TW
Subjt:  ---ATIGRSEGILVECSFGAV----CTLSHLISHQTSAIQNLALHF-VNIPTGC---------------EDLSLQAREKFNMSVRSLAHPFSISEVARTW

Query:  DMCARDVISEYARQNGGGSFSSKYGSWE
        D CAR VI EYA+Q GGG+FSSKYG+WE
Subjt:  DMCARDVISEYARQNGGGSFSSKYGSWE

AT2G10440.1 unknown protein1.2e-2328.67Show/hide
Query:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS
        P+ RLIK     SPK+L+ SVS+I S++ M D +  S P   S G     L   ++ R R   +     +  R  R    +   M  +      L +  S
Subjt:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS

Query:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSA--------------IQNL
         ++ T   S     ++    +LL+EI+  N +L+ T V ICD+D            S G +V C++  V   +    H  S               IQ L
Subjt:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLSHLISHQTSA--------------IQNL

Query:  ALHF--------------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA
         L F              ++  T     EDLS + R +F++S++  + P     +A+TW+ CAR  + EYA ++GGG+FSSKYG+WE  L  +
Subjt:  ALHF--------------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA

AT2G10440.2 unknown protein6.6e-2529.68Show/hide
Query:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS
        P+ RLIK     SPK+L+ SVS+I S++ M D +  S P   S G     L   ++ R R   +     +  R  R    +   M  +      L +  S
Subjt:  PLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKGAVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCL---MDCEGFDLSSLFTQRS

Query:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLS----HLISHQTSAIQNLALHF------
         ++ T   S     ++    +LL+EI+  N +L+ T V ICD+D            S G +V C++  V   +    H  S + + IQ L L F      
Subjt:  RIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSEGILVECSFGAVCTLS----HLISHQTSAIQNLALHF------

Query:  --------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA
                ++  T     EDLS + R +F++S++  + P     +A+TW+ CAR  + EYA ++GGG+FSSKYG+WE  L  +
Subjt:  --------VNIPTGC---EDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGCAGGAAGGATCAAGTACCAGAATTGATTTCGAGAAGGCTTTGGAGAATTTTCTCTACCCACCAATTGTAAATGATGCTGCCCAAGCAGAAAAGGCGTTCAT
CGTCTCCACCCCTGGAATGTCACCTTCATCCCTTTTGGAGGAGGTAACAGATTCAGATCGTGATAATGACAAGTGCTGTGTTACTCCTCTTCAACGTTTGATTAAGATGG
TAAACGTAATGTCACCTAAAGCGTTAAGTGCTTCTGTTAGTGACATAGATTCTATTGTCTGTATGACTGATAGAGTATCTTCATCAGCGCCTCTTAACAAGTCAAAAGGT
GCAGTTGGCATGGATTTGGCGGGCACCGTTGCATCTCGTCTGAGAAGAAAATGTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGACACTACAGATGTTTGAT
GGATTGTGAAGGCTTTGACTTGAGTTCATTATTTACTCAAAGGTCAAGAATAATTGAGACTCCCAAACATTCGAATTGGCACGGGTTTTCATTGCCGGTGAAGCAATCTT
TATTGGAAGAAATTAGGAGGATAAATGAGCAGCTGATTTATACAGAGGTGTCTATTTGTGACAAAGATATGGTAACGACGGATCCTGGAGCTACAATTGGCAGAAGTGAA
GGGATCTTAGTCGAATGTTCTTTTGGTGCTGTGTGTACCCTTTCACATTTAATCTCACACCAAACTTCAGCTATTCAGAATTTGGCATTACACTTTGTAAATATTCCAAC
AGGTTGCGAAGACCTTTCATTGCAGGCAAGGGAAAAGTTCAACATGTCTGTCCGAAGCCTTGCACATCCATTCTCTATTAGTGAAGTGGCCAGGACATGGGACATGTGTG
CTCGAGACGTCATTTCGGAGTATGCTCGACAAAACGGCGGTGGCAGTTTTAGTTCAAAGTATGGCTCGTGGGAGGACTGTCTTCATACTGCTTGGTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAAGCAGGAAGGATCAAGTACCAGAATTGATTTCGAGAAGGCTTTGGAGAATTTTCTCTACCCACCAATTGTAAATGATGCTGCCCAAGCAGAAAAGGCGTTCAT
CGTCTCCACCCCTGGAATGTCACCTTCATCCCTTTTGGAGGAGGTAACAGATTCAGATCGTGATAATGACAAGTGCTGTGTTACTCCTCTTCAACGTTTGATTAAGATGG
TAAACGTAATGTCACCTAAAGCGTTAAGTGCTTCTGTTAGTGACATAGATTCTATTGTCTGTATGACTGATAGAGTATCTTCATCAGCGCCTCTTAACAAGTCAAAAGGT
GCAGTTGGCATGGATTTGGCGGGCACCGTTGCATCTCGTCTGAGAAGAAAATGTTCAAGATTTGGAGGCACTATTGGATCAAGGAGAACAAGACACTACAGATGTTTGAT
GGATTGTGAAGGCTTTGACTTGAGTTCATTATTTACTCAAAGGTCAAGAATAATTGAGACTCCCAAACATTCGAATTGGCACGGGTTTTCATTGCCGGTGAAGCAATCTT
TATTGGAAGAAATTAGGAGGATAAATGAGCAGCTGATTTATACAGAGGTGTCTATTTGTGACAAAGATATGGTAACGACGGATCCTGGAGCTACAATTGGCAGAAGTGAA
GGGATCTTAGTCGAATGTTCTTTTGGTGCTGTGTGTACCCTTTCACATTTAATCTCACACCAAACTTCAGCTATTCAGAATTTGGCATTACACTTTGTAAATATTCCAAC
AGGTTGCGAAGACCTTTCATTGCAGGCAAGGGAAAAGTTCAACATGTCTGTCCGAAGCCTTGCACATCCATTCTCTATTAGTGAAGTGGCCAGGACATGGGACATGTGTG
CTCGAGACGTCATTTCGGAGTATGCTCGACAAAACGGCGGTGGCAGTTTTAGTTCAAAGTATGGCTCGTGGGAGGACTGTCTTCATACTGCTTGGTCATAA
Protein sequenceShow/hide protein sequence
MEKQEGSSTRIDFEKALENFLYPPIVNDAAQAEKAFIVSTPGMSPSSLLEEVTDSDRDNDKCCVTPLQRLIKMVNVMSPKALSASVSDIDSIVCMTDRVSSSAPLNKSKG
AVGMDLAGTVASRLRRKCSRFGGTIGSRRTRHYRCLMDCEGFDLSSLFTQRSRIIETPKHSNWHGFSLPVKQSLLEEIRRINEQLIYTEVSICDKDMVTTDPGATIGRSE
GILVECSFGAVCTLSHLISHQTSAIQNLALHFVNIPTGCEDLSLQAREKFNMSVRSLAHPFSISEVARTWDMCARDVISEYARQNGGGSFSSKYGSWEDCLHTAWS