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Carg02025 (gene) of Silver-seed gourd (SMH-JMG-627) v2 genome

Gene IDCarg02025
OrganismCucurbita argyrosperma subsp. argyrosperma cv. SMH-JMG-627 (Silver-seed gourd (SMH-JMG-627) v2)
Descriptiondefensin-like protein 2
Genome locationCarg_Chr04:7973024..7973495
RNA-Seq ExpressionCarg02025
SyntenyCarg02025
Gene Ontology termsGO:0031640 - killing of cells of other organism (biological process)
GO:0050832 - defense response to fungus (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR003614 - Knottin, scorpion toxin-like
IPR036574 - Knottin, scorpion toxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590359.1 Defensin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3998.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        M GQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
KAG6590363.1 Defensin-like protein 8, partial [Cucurbita argyrosperma subsp. sororia]1.1e-3998.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSK+CAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
XP_022933232.1 defensin-like protein 2 [Cucurbita moschata]3.7e-40100Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
XP_022933233.1 defensin-like protein 2 [Cucurbita moschata]1.1e-3998.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCI+ETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
XP_022961379.1 defensin-like protein 2 [Cucurbita moschata]1.1e-3998.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        M GQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
TrEMBL top hitse value%identityAlignment
A0A6J1EZ71 defensin-like protein 21.8e-40100Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
A0A6J1F464 defensin-like protein 25.2e-4098.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCI+ETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
A0A6J1F4H8 defensin-like protein 26.8e-40100Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAEST
        MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAEST
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAEST
A0A6J1HDV2 defensin-like protein 25.2e-4098.75Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        M GQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
A0A6J1IBG0 defensin-like protein 59.3e-3792.5Show/hide
Query:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
        MAGQSLRNLKIVVFIFLALTSGWMV QTEGRTCYKHSDAFIGPCI  TCAELCISFEKWD GFCSGDKCTC+KQCAES L
Subjt:  MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL
SwissProt top hitse value%identityAlignment
B3F051 Defensin Lc-def2.6e-0437.5Show/hide
Query:  FIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEE-TCAELCISFEKWDGGFCSGD-KCTCSKQC
        F+F+ L     +A TE +TC   SD+F GPCI +  C + C   E    G C  D +C C++ C
Subjt:  FIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEE-TCAELCISFEKWDGGFCSGD-KCTCSKQC
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGGACAAAGCTTGAGAAATCTCAAAATTGTGGTGTTCATCTTCCTAGCCCTTACTTCTGGATGGATGGTGGCTCAGACGGAGGGGCGGACATGCTATAAACACAG
CGATGCGTTTATAGGACCGTGCATTGAAGAAACATGTGCTGAACTTTGCATTTCTTTTGAGAAGTGGGATGGCGGATTTTGCTCGGGTGATAAATGCACTTGTTCGAAGC
AATGTGCTGAGTCCACGCTTTAA
mRNA sequenceShow/hide mRNA sequence
GTGATTATTCTTTCCTTGAAATCGCAAGGAAATAAAGAAGACGTTACAAAGATGAGGCGTTTCACGGATATAAAATGGGGAACTGATACCCAAGCATTCCATTGTAGCAA
GGAATAAGAGAAGAAAAGAATGGCGGGACAAAGCTTGAGAAATCTCAAAATTGTGGTGTTCATCTTCCTAGCCCTTACTTCTGGATGGATGGTGGCTCAGACGGAGGGGC
GGACATGCTATAAACACAGCGATGCGTTTATAGGACCGTGCATTGAAGAAACATGTGCTGAACTTTGCATTTCTTTTGAGAAGTGGGATGGCGGATTTTGCTCGGGTGAT
AAATGCACTTGTTCGAAGCAATGTGCTGAGTCCACGCTTTAA
Protein sequenceShow/hide protein sequence
MAGQSLRNLKIVVFIFLALTSGWMVAQTEGRTCYKHSDAFIGPCIEETCAELCISFEKWDGGFCSGDKCTCSKQCAESTL